Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331D06f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    24   0.82 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   1.9  
DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    21   5.8  
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    21   5.8  
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    21   5.8  
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    21   5.8  
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    21   5.8  
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    21   5.8  
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    21   5.8  
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    21   5.8  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    21   5.8  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    21   5.8  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   5.8  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    21   7.7  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -2

Query: 139 VLPPVIRQIIILRVFIFITRCYSFTVEINRDHL 41
           VLP  I  ++ + + I + R    T  +NR+HL
Sbjct: 231 VLPMTIIIVLYILIAIKLRRSRMLTATVNRNHL 263


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -2

Query: 205 THYCVTADIGGVVVPTRAELQEVLPPVIRQ 116
           T+ CV  +  G       E+Q ++PP I+Q
Sbjct: 558 TYTCVARNAQGYSARGTLEVQVMVPPTIQQ 587


>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 2   EAGTNFSNEIRTQQMITIDFHGEGITSCNKNKNPQNYNLPNY 127
           E   N +   R+++   I  +     + N N N  NYN  NY
Sbjct: 65  ERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNY 106


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 2   EAGTNFSNEIRTQQMITIDFHGEGITSCNKNKNPQNYNLPNY 127
           E   N +   R+++   I  +     + N N N  NYN  NY
Sbjct: 65  ERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNY 106


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 2   EAGTNFSNEIRTQQMITIDFHGEGITSCNKNKNPQNYNLPNY 127
           E   N +   R+++   I  +     + N N N  NYN  NY
Sbjct: 65  ERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNY 106


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 2   EAGTNFSNEIRTQQMITIDFHGEGITSCNKNKNPQNYNLPNY 127
           E   N +   R+++   I  +     + N N N  NYN  NY
Sbjct: 65  ERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNY 106


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 2   EAGTNFSNEIRTQQMITIDFHGEGITSCNKNKNPQNYNLPNY 127
           E   N +   R+++   I  +     + N N N  NYN  NY
Sbjct: 65  ERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNY 106


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 2   EAGTNFSNEIRTQQMITIDFHGEGITSCNKNKNPQNYNLPNY 127
           E   N +   R+++   I  +     + N N N  NYN  NY
Sbjct: 65  ERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNY 106


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 2   EAGTNFSNEIRTQQMITIDFHGEGITSCNKNKNPQNYNLPNY 127
           E   N +   R+++   I  +     + N N N  NYN  NY
Sbjct: 65  ERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNY 106


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 2   EAGTNFSNEIRTQQMITIDFHGEGITSCNKNKNPQNYNLPNY 127
           E   N +   R+++   I  +     + N N N  NYN  NY
Sbjct: 65  ERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNY 106


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 2   EAGTNFSNEIRTQQMITIDFHGEGITSCNKNKNPQNYNLPNY 127
           E   N +   R+++   I  +     + N N N  NYN  NY
Sbjct: 298 ERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNY 339


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 2   EAGTNFSNEIRTQQMITIDFHGEGITSCNKNKNPQNYNLPNY 127
           E   N +   R+++   I  +     + N N N  NYN  NY
Sbjct: 298 ERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNY 339


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 20   SNEIRTQQMITIDFHGEGITSCNKNKN 100
            S + +T +M+T    G+ I   + NKN
Sbjct: 1187 SQQAQTVRMVTAQLAGKPIVLASGNKN 1213


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 2   EAGTNFSNEIRTQQMITIDFHGEGITSCNKNKNPQNYNLPNY 127
           E   N +   R+++   I  +     + N N N  NYN  NY
Sbjct: 65  ERSRNRTERERSKEPKIISNNNPLSNNYNYNNNYNNYNKHNY 106


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,447
Number of Sequences: 438
Number of extensions: 3212
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)