Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331D04f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    26   0.88 
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    23   8.2  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    23   8.2  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    23   8.2  

>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 25.8 bits (54), Expect = 0.88
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -2

Query: 415 LDAKVDHGILKRTPHIVLQGQIVDSLRIIFIIVLLSTNP 299
           L  K+D  ++++TPHI+ Q +      ++    LL  +P
Sbjct: 248 LHIKLDEDVVQQTPHIIQQCESTKLQIVVVCPALLGLSP 286


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 284 HLVSRWIRTQQYYYENDPKRV 346
           +L  RW+R   + +  DP RV
Sbjct: 334 NLALRWVRDNIHRFGGDPSRV 354


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 284 HLVSRWIRTQQYYYENDPKRV 346
           +L  RW+R   + +  DP RV
Sbjct: 334 NLALRWVRDNIHRFGGDPSRV 354


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 284 HLVSRWIRTQQYYYENDPKRV 346
           +L  RW+R   + +  DP RV
Sbjct: 220 NLALRWVRDNIHRFGGDPSRV 240


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 501,168
Number of Sequences: 2352
Number of extensions: 10686
Number of successful extensions: 73
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)