Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331D02f
         (406 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              22   2.3  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    22   2.3  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    20   9.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    20   9.3  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          20   9.3  

>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 5/19 (26%), Positives = 11/19 (57%)
 Frame = -1

Query: 154 YCRQNQFIYPSHVVIGHCH 98
           YC +  ++   H+ + HC+
Sbjct: 92  YCCRESYLKERHITLHHCY 110


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 5/19 (26%), Positives = 11/19 (57%)
 Frame = -1

Query: 154 YCRQNQFIYPSHVVIGHCH 98
           YC +  ++   H+ + HC+
Sbjct: 92  YCCRESYLKERHITLHHCY 110


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 6/24 (25%), Positives = 12/24 (50%)
 Frame = -3

Query: 362 CAVISSPCFFLPFDDKYSFSFSAL 291
           C    +PC +  F   + F+F ++
Sbjct: 53  CNSAINPCIYALFSKDFRFAFKSI 76


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 6/24 (25%), Positives = 12/24 (50%)
 Frame = -3

Query: 362 CAVISSPCFFLPFDDKYSFSFSAL 291
           C    +PC +  F   + F+F ++
Sbjct: 501 CNSAINPCIYALFSKDFRFAFKSI 524


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 162 STRNFGRGCGTIYGRVLQVG 221
           ++  FG   GT+YGR  + G
Sbjct: 542 ASTEFGIPTGTLYGRCKREG 561


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,137
Number of Sequences: 438
Number of extensions: 1751
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10132494
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)