Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331C08f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   1.9  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    22   3.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   5.8  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
 Frame = +3

Query: 213 GPKERVCFYDTAGL-EPPLTG----EFKGPPQSPTMQLTANQVLQ 332
           GP + + + +   L +P L G    EF G PQ+  +Q   NQ++Q
Sbjct: 297 GPIKDIDYENVQSLYQPHLRGLNGLEFAGRPQNLQLQSQRNQLIQ 341


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 512 VLEAVRIIWSGSIT 471
           V E VRII+ GS+T
Sbjct: 199 VAETVRIIYGGSVT 212


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 334 RWSTWLAVSCIVGDCGG 284
           +W    AVS +V DCGG
Sbjct: 271 KWFAVPAVSGMVFDCGG 287


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,484
Number of Sequences: 438
Number of extensions: 3161
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)