Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331C07f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55365-5|AAN84867.2|  350|Caenorhabditis elegans Serpentine rece...    33   0.16 
U80842-5|AAK71419.2|  305|Caenorhabditis elegans Serpentine rece...    31   0.38 
AC006830-8|ABA00186.1|  289|Caenorhabditis elegans Hypothetical ...    31   0.50 
AF024498-8|AAF39807.3|  305|Caenorhabditis elegans Serpentine re...    29   1.5  
Z70780-1|CAA94819.1|  336|Caenorhabditis elegans Hypothetical pr...    29   2.0  
U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defe...    29   2.0  
U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defe...    29   2.0  
AF106575-10|AAC78167.1|  153|Caenorhabditis elegans Hypothetical...    29   2.0  
AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-ty...    29   2.0  
Z47812-10|CAH04720.1|  979|Caenorhabditis elegans Hypothetical p...    29   2.7  
Z47812-6|CAC70105.1|  984|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z47812-5|CAA87792.1|  980|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AF068709-9|AAC19248.1|  349|Caenorhabditis elegans Seven tm rece...    28   4.7  
U40955-4|AAA81752.1|  297|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical ...    27   6.2  
AC024808-1|AAK29927.1|  309|Caenorhabditis elegans Hypothetical ...    27   6.2  
Z99709-1|CAB16858.1|  488|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z83104-5|CAC35810.1|  570|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AB012700-1|BAA89795.1|  570|Caenorhabditis elegans FLR-4 protein.      27   8.1  

>U55365-5|AAN84867.2|  350|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 11 protein.
          Length = 350

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
 Frame = -3

Query: 141 SYYHKNLLIYFIKVL--STFFYILCCI--FSFNITLLYSFLFCI 22
           +Y +    +Y I  +  S FF+++ C   F FN T+L  +++CI
Sbjct: 24  NYLYLEFFLYIIDTIQFSFFFWVMLCAKQFHFNFTILLGYIYCI 67


>U80842-5|AAK71419.2|  305|Caenorhabditis elegans Serpentine
           receptor, class i protein50 protein.
          Length = 305

 Score = 31.5 bits (68), Expect = 0.38
 Identities = 21/68 (30%), Positives = 30/68 (44%)
 Frame = -3

Query: 216 REKSKAFACLHVTLHIYEI*KYKTFSYYHKNLLIYFIKVLSTFFYILCCIFSFNITLLYS 37
           RE S AF  L    +I E  K   F+ Y  +    F  +++TF  +L CI     T  Y 
Sbjct: 158 REVSMAFVVLTYPQYISEFSKLNNFAIYQWSFWFIFSGIVATFGIVLYCIICNFAT--YD 215

Query: 36  FLFCIRAV 13
            L  ++ V
Sbjct: 216 MLLMLKEV 223


>AC006830-8|ABA00186.1|  289|Caenorhabditis elegans Hypothetical
           protein ZK105.8 protein.
          Length = 289

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -3

Query: 144 FSYYHKNLLIYFIKVLSTFFYILCCIFSFNITLL 43
           F +Y  N+ + + K+L   F I+C +   ++TLL
Sbjct: 11  FYFYTGNIRVDYFKILKEIFQIMCILLDIHLTLL 44


>AF024498-8|AAF39807.3|  305|Caenorhabditis elegans Serpentine
           receptor, class x protein105 protein.
          Length = 305

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -3

Query: 123 LLIYFIKVLSTFFYILCCIFSF-NITLLYSFLFCIRAV 13
           +L YF K+  T FYILC   +  NI +L ++ F +  V
Sbjct: 29  MLYYFSKLQKTSFYILCASKTISNIFMLLTYFFYVGPV 66


>Z70780-1|CAA94819.1|  336|Caenorhabditis elegans Hypothetical
           protein F46B6.2 protein.
          Length = 336

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = -3

Query: 192 CLHVTLHIYEI*KYKTFSYYHKNLLIYFIKVLSTFFYILCCIFSF 58
           C  +T +     K + +SY+++ ++  FI ++S F    CC F F
Sbjct: 163 CTLLTFYSATETKIRLYSYHYQVVISIFIIIVSFFHLRYCCTFFF 207


>U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying
           defective protein 19,isoform a protein.
          Length = 1783

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +3

Query: 291 VIVFS*FNYLL*FQLGT*TYTSLIFENIFVSDIPCITYRFSIMYYDVMK*NHVDIV-SKT 467
           VI+FS    L  + LG  TYT+  F       +      F ++Y+D+MK   V ++ S  
Sbjct: 513 VILFSMEMLLKMYSLGFTTYTTSQFNRFDCFVVISSILEFVLVYFDLMKPLGVSVLRSAR 572

Query: 468 LLQIF 482
           LL+IF
Sbjct: 573 LLRIF 577


>U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying
           defective protein 19,isoform b protein.
          Length = 1877

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +3

Query: 291 VIVFS*FNYLL*FQLGT*TYTSLIFENIFVSDIPCITYRFSIMYYDVMK*NHVDIV-SKT 467
           VI+FS    L  + LG  TYT+  F       +      F ++Y+D+MK   V ++ S  
Sbjct: 513 VILFSMEMLLKMYSLGFTTYTTSQFNRFDCFVVISSILEFVLVYFDLMKPLGVSVLRSAR 572

Query: 468 LLQIF 482
           LL+IF
Sbjct: 573 LLRIF 577


>AF106575-10|AAC78167.1|  153|Caenorhabditis elegans Hypothetical
           protein K04F1.8 protein.
          Length = 153

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -3

Query: 108 IKVLSTFFYILCCIFSFNITLLYSFLFCIRAVC*K 4
           ++   TF  +LCC  S   TLL  FLF  R +C K
Sbjct: 1   MEFFKTFLILLCCFLSVQ-TLLTKFLFRGRLLCNK 34


>AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-type
           calcium channelalpha 1 subunit protein.
          Length = 1783

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +3

Query: 291 VIVFS*FNYLL*FQLGT*TYTSLIFENIFVSDIPCITYRFSIMYYDVMK*NHVDIV-SKT 467
           VI+FS    L  + LG  TYT+  F       +      F ++Y+D+MK   V ++ S  
Sbjct: 513 VILFSMEMLLKMYSLGFTTYTTSQFNRFDCFVVISSILEFVLVYFDLMKPLGVSVLRSAR 572

Query: 468 LLQIF 482
           LL+IF
Sbjct: 573 LLRIF 577


>Z47812-10|CAH04720.1|  979|Caenorhabditis elegans Hypothetical
           protein T05H10.5c protein.
          Length = 979

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +2

Query: 314 LSIIISVRYLNIY*PHFRKYFCL*YTLYNLQIFHNVL*C 430
           +S++IS+ YL +  P F KY       Y+ + FHN + C
Sbjct: 829 VSLLISI-YLKLNMPAFVKYIAYDERTYSPEFFHNAIEC 866


>Z47812-6|CAC70105.1|  984|Caenorhabditis elegans Hypothetical
           protein T05H10.5b protein.
          Length = 984

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +2

Query: 314 LSIIISVRYLNIY*PHFRKYFCL*YTLYNLQIFHNVL*C 430
           +S++IS+ YL +  P F KY       Y+ + FHN + C
Sbjct: 834 VSLLISI-YLKLNMPAFVKYIAYDERTYSPEFFHNAIEC 871


>Z47812-5|CAA87792.1|  980|Caenorhabditis elegans Hypothetical
           protein T05H10.5a protein.
          Length = 980

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +2

Query: 314 LSIIISVRYLNIY*PHFRKYFCL*YTLYNLQIFHNVL*C 430
           +S++IS+ YL +  P F KY       Y+ + FHN + C
Sbjct: 830 VSLLISI-YLKLNMPAFVKYIAYDERTYSPEFFHNAIEC 867


>AF068709-9|AAC19248.1|  349|Caenorhabditis elegans Seven tm
           receptor protein 13 protein.
          Length = 349

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -3

Query: 153 YKTFSYYHKNLLIYFIKVLSTFFYILCCIFSFNITL-LYSFL 31
           Y+ ++ +  N L YF    S F++  C  F F   L  Y FL
Sbjct: 118 YRYWAVFDTNKLAYFEGCNSLFWFFYCAFFGFQYALGTYFFL 159


>U40955-4|AAA81752.1|  297|Caenorhabditis elegans Hypothetical
           protein F48B9.2 protein.
          Length = 297

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -3

Query: 129 KNLLIYFIKVLSTFFYILCCIFSF 58
           + LLI F+ +LS  F++L C++ F
Sbjct: 255 EELLIAFLIMLSLTFFVLMCVYGF 278


>AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical
            protein D1007.15 protein.
          Length = 1184

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -3

Query: 120  LIYFIKVLSTFFYILCCIFSFNITLLYSFL 31
            L+Y + +L + F+ L  IF+ + T+L SFL
Sbjct: 933  LLYSVTILMSTFFFLPIIFTHSQTILTSFL 962


>AC024808-1|AAK29927.1|  309|Caenorhabditis elegans Hypothetical
           protein Y53G8AM.4 protein.
          Length = 309

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = -3

Query: 198 FACLHVTLHIYEI*KYKTFSYYHKNLLIYFIKVLSTFFYILCCIFSFNI 52
           F C HV +  Y+  KY+ F         +F+ +L+   ++L  IF  N+
Sbjct: 123 FGCFHVYITSYKYHKYRAF------FRGWFVPILNCLNFVLALIFLINL 165


>Z99709-1|CAB16858.1|  488|Caenorhabditis elegans Hypothetical
           protein C47B2.1 protein.
          Length = 488

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -3

Query: 126 NLLIYFIKVLSTFFYILCCIFSFNITLLYSFLF 28
           +LL YF  V   +F++  C  +F IT  +  +F
Sbjct: 27  SLLFYFFTVDFPYFFLTKCSLNFRITKFFCVVF 59


>Z83104-5|CAC35810.1|  570|Caenorhabditis elegans Hypothetical
           protein F09B12.6 protein.
          Length = 570

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 141 SYYHKNLLIYFIKVLSTFFYILCCIFSFNITLLYSFL 31
           S Y+ + ++YF+ +L+     L    S  IT L SFL
Sbjct: 407 SGYYLSRILYFLNILTRSICYLLLFLSLGITALGSFL 443


>AB012700-1|BAA89795.1|  570|Caenorhabditis elegans FLR-4 protein.
          Length = 570

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 141 SYYHKNLLIYFIKVLSTFFYILCCIFSFNITLLYSFL 31
           S Y+ + ++YF+ +L+     L    S  IT L SFL
Sbjct: 407 SGYYLSRILYFLNILTRSICYLLLFLSLGITALGSFL 443


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,423,183
Number of Sequences: 27780
Number of extensions: 210764
Number of successful extensions: 525
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)