Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS331C05f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF087660-1|AAD23566.1| 156|Homo sapiens NADH:ubiquinone oxidore... 122 1e-27
AC002400-1|AAC05814.1| 161|Homo sapiens Acyl carrier protein, M... 122 1e-27
BC058920-1|AAH58920.1| 156|Homo sapiens NADH dehydrogenase (ubi... 118 1e-26
EF036490-1|ABO65076.1| 124|Homo sapiens NADH:ubiquinone oxidore... 78 2e-14
M97806-1|AAB05630.2| 110|Homo sapiens immunoglobulin kappa ligh... 31 2.4
U51134-1|AAD05036.1| 148|Homo sapiens calcitonin gene-related p... 31 3.2
BC105808-1|AAI05809.1| 148|Homo sapiens calcitonin gene-related... 31 3.2
BC040107-1|AAH40107.1| 115|Homo sapiens calcitonin gene-related... 31 3.2
AF073792-1|AAC25992.1| 148|Homo sapiens CGRP-receptor component... 31 3.2
BC008755-1|AAH08755.1| 867|Homo sapiens ABCA2 protein protein. 30 4.3
AL807752-22|CAI12768.1| 2435|Homo sapiens ATP-binding cassette, ... 30 4.3
AL807752-21|CAI12767.1| 267|Homo sapiens ATP-binding cassette, ... 30 4.3
AF327705-1|AAK14335.1| 2436|Homo sapiens ABC transporter ABCA2 p... 30 4.3
AF327657-1|AAK14334.1| 2436|Homo sapiens ABC transporter ABCA2 p... 30 4.3
AF178941-1|AAG09372.1| 2436|Homo sapiens ATP-binding cassette su... 30 4.3
AB177854-1|BAD66832.1| 1440|Homo sapiens KIAA1062 splice variant... 30 4.3
AB028985-1|BAA83014.2| 1771|Homo sapiens KIAA1062 protein protein. 30 4.3
M99603-1|AAA59081.1| 108|Homo sapiens immunoglobulin kappa ligh... 29 7.5
AJ555983-1|CAD88691.1| 82|Homo sapiens immunoglobulin kappa li... 29 7.5
AJ426154-1|CAD19844.1| 83|Homo sapiens immunoglobulin kappa li... 29 9.9
>AF087660-1|AAD23566.1| 156|Homo sapiens NADH:ubiquinone
oxidoreductase SDAP subunit protein.
Length = 156
Score = 122 bits (293), Expect = 1e-27
Identities = 67/146 (45%), Positives = 94/146 (64%), Gaps = 1/146 (0%)
Frame = +1
Query: 34 SAFGGLLR-RSTTYRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGV 210
+AF L R R ++ L + Q + T++ A+ + +Q +YS
Sbjct: 15 AAFAPLPRVRMLAVARPLSTALCSAGTQTRLGTLQPALVL--AQVPGRVTQLCRQYSD-- 70
Query: 211 QSKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEI 390
L+++ I++RVL V K YDK+ +L+V+SHFM DLGLDSLD VE+IMAMEDEFGFEI
Sbjct: 71 MPPLTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEI 130
Query: 391 PDGDAERLVRPKDIVQYIADKEDIYE 468
PD DAE+L+ P++IV YIADK+D+YE
Sbjct: 131 PDIDAEKLMCPQEIVDYIADKKDVYE 156
>AC002400-1|AAC05814.1| 161|Homo sapiens Acyl carrier protein,
Mitochondrial (ACP) (5'partial) protein.
Length = 161
Score = 122 bits (293), Expect = 1e-27
Identities = 67/146 (45%), Positives = 94/146 (64%), Gaps = 1/146 (0%)
Frame = +1
Query: 34 SAFGGLLR-RSTTYRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGV 210
+AF L R R ++ L + Q + T++ A+ + +Q +YS
Sbjct: 20 AAFAPLPRVRMLAVARPLSTALCSAGTQTRLGTLQPALVL--AQVPGRVTQLCRQYSD-- 75
Query: 211 QSKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEI 390
L+++ I++RVL V K YDK+ +L+V+SHFM DLGLDSLD VE+IMAMEDEFGFEI
Sbjct: 76 MPPLTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEI 135
Query: 391 PDGDAERLVRPKDIVQYIADKEDIYE 468
PD DAE+L+ P++IV YIADK+D+YE
Sbjct: 136 PDIDAEKLMCPQEIVDYIADKKDVYE 161
>BC058920-1|AAH58920.1| 156|Homo sapiens NADH dehydrogenase
(ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa protein.
Length = 156
Score = 118 bits (284), Expect = 1e-26
Identities = 66/146 (45%), Positives = 93/146 (63%), Gaps = 1/146 (0%)
Frame = +1
Query: 34 SAFGGLLR-RSTTYRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGV 210
+AF L R R ++ L + Q + T++ A+ + +Q +YS
Sbjct: 15 AAFAPLPRVRMLAVARPLSTALCSAGTQTRLGTLQPALVL--AQVPGRVTQLCRQYSD-- 70
Query: 211 QSKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEI 390
L+++ I++RVL V K YDK+ +L+V+SHFM DLGLDSLD VE+IMAMEDEFGFEI
Sbjct: 71 MPPLTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEI 130
Query: 391 PDGDAERLVRPKDIVQYIADKEDIYE 468
P DAE+L+ P++IV YIADK+D+YE
Sbjct: 131 PYIDAEKLMCPQEIVDYIADKKDVYE 156
>EF036490-1|ABO65076.1| 124|Homo sapiens NADH:ubiquinone
oxidoreductase SDAP subunit protein.
Length = 124
Score = 78.2 bits (184), Expect = 2e-14
Identities = 47/117 (40%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Frame = +1
Query: 34 SAFGGLLR-RSTTYRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGV 210
+AF L R R ++ L + Q + T++ A+ + +Q +YS
Sbjct: 12 AAFAPLPRVRMLAVARPLSTALCSAGTQTRLGTLQPALVL--AQVPGRVTQLCRQYSD-- 67
Query: 211 QSKLSVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFG 381
L+++ I++RVL V K YDK+ +L+V+SHFM DLGLDSLD VE+IMAMEDEFG
Sbjct: 68 MPPLTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFG 124
>M97806-1|AAB05630.2| 110|Homo sapiens immunoglobulin kappa light
chain variable region protein.
Length = 110
Score = 31.1 bits (67), Expect = 2.4
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Frame = +1
Query: 70 YRTSVTCRLST-----VALQQKFSTIKAAVKIYKSQALQNGVPQSHRYS---TGVQSKLS 225
YR ++TCR S +A Q+ I + IYK+ +LQ+GV S R+S +G L+
Sbjct: 17 YRVTITCRASQSISSWLAWYQQKPGIAPKLLIYKASSLQSGV--SSRFSGSGSGTDFTLT 74
Query: 226 VQEI--EERVLKVCKAYD 273
+ + ++ C+ YD
Sbjct: 75 ISSLQPDDFATSYCQQYD 92
>U51134-1|AAD05036.1| 148|Homo sapiens calcitonin gene-related
peptide receptor component protein protein.
Length = 148
Score = 30.7 bits (66), Expect = 3.2
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +1
Query: 70 YRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGVQSKLSVQEIEERV 249
Y + CR + + ++F T + K+ K++ LQ +HR T V+ +L V+E EER+
Sbjct: 52 YISKTPCRHQSPEIVREFLTALKSHKLTKAEKLQL---LNHRPVTAVEIQLMVEESEERL 108
>BC105808-1|AAI05809.1| 148|Homo sapiens calcitonin gene-related
peptide-receptor component protein protein.
Length = 148
Score = 30.7 bits (66), Expect = 3.2
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +1
Query: 70 YRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGVQSKLSVQEIEERV 249
Y + CR + + ++F T + K+ K++ LQ +HR T V+ +L V+E EER+
Sbjct: 52 YISKTPCRHQSPEIVREFLTALKSHKLTKAEKLQL---LNHRPVTAVEIQLMVEESEERL 108
>BC040107-1|AAH40107.1| 115|Homo sapiens calcitonin gene-related
peptide-receptor component protein protein.
Length = 115
Score = 30.7 bits (66), Expect = 3.2
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +1
Query: 70 YRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGVQSKLSVQEIEERV 249
Y + CR + + ++F T + K+ K++ LQ +HR T V+ +L V+E EER+
Sbjct: 19 YISKTPCRHQSPEIVREFLTALKSHKLTKAEKLQL---LNHRPVTAVEIQLMVEESEERL 75
>AF073792-1|AAC25992.1| 148|Homo sapiens CGRP-receptor component
protein protein.
Length = 148
Score = 30.7 bits (66), Expect = 3.2
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +1
Query: 70 YRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALQNGVPQSHRYSTGVQSKLSVQEIEERV 249
Y + CR + + ++F T + K+ K++ LQ +HR T V+ +L V+E EER+
Sbjct: 52 YISKTPCRHQSPEIVREFLTALKSHKLTKAEKLQL---LNHRPVTAVEIQLMVEESEERL 108
>BC008755-1|AAH08755.1| 867|Homo sapiens ABCA2 protein protein.
Length = 867
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = -3
Query: 483 YIFLLFINIFL-----VSNVLDNVFWSNQSLCITIRYLKSKFIFHCHYDL 349
Y+FL+ IN+F+ V+ L +F ++ L + YLKS F+ +Y+L
Sbjct: 336 YVFLIVINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNL 385
>AL807752-22|CAI12768.1| 2435|Homo sapiens ATP-binding cassette,
sub-family A (ABC1), membertor protein.
Length = 2435
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = -3
Query: 483 YIFLLFINIFL-----VSNVLDNVFWSNQSLCITIRYLKSKFIFHCHYDL 349
Y+FL+ IN+F+ V+ L +F ++ L + YLKS F+ +Y+L
Sbjct: 1904 YVFLIVINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNL 1953
>AL807752-21|CAI12767.1| 267|Homo sapiens ATP-binding cassette,
sub-family A (ABC1), memberase) protein.
Length = 267
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = -3
Query: 483 YIFLLFINIFL-----VSNVLDNVFWSNQSLCITIRYLKSKFIFHCHYDL 349
Y+FL+ IN+F+ V+ L +F ++ L + YLKS F+ +Y+L
Sbjct: 81 YVFLIVINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNL 130
>AF327705-1|AAK14335.1| 2436|Homo sapiens ABC transporter ABCA2
protein.
Length = 2436
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = -3
Query: 483 YIFLLFINIFL-----VSNVLDNVFWSNQSLCITIRYLKSKFIFHCHYDL 349
Y+FL+ IN+F+ V+ L +F ++ L + YLKS F+ +Y+L
Sbjct: 1905 YVFLIVINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNL 1954
>AF327657-1|AAK14334.1| 2436|Homo sapiens ABC transporter ABCA2
protein.
Length = 2436
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = -3
Query: 483 YIFLLFINIFL-----VSNVLDNVFWSNQSLCITIRYLKSKFIFHCHYDL 349
Y+FL+ IN+F+ V+ L +F ++ L + YLKS F+ +Y+L
Sbjct: 1905 YVFLIVINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNL 1954
>AF178941-1|AAG09372.1| 2436|Homo sapiens ATP-binding cassette
sub-family A member 2 protein.
Length = 2436
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = -3
Query: 483 YIFLLFINIFL-----VSNVLDNVFWSNQSLCITIRYLKSKFIFHCHYDL 349
Y+FL+ IN+F+ V+ L +F ++ L + YLKS F+ +Y+L
Sbjct: 1905 YVFLIVINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNL 1954
>AB177854-1|BAD66832.1| 1440|Homo sapiens KIAA1062 splice variant 1
protein.
Length = 1440
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = -3
Query: 483 YIFLLFINIFL-----VSNVLDNVFWSNQSLCITIRYLKSKFIFHCHYDL 349
Y+FL+ IN+F+ V+ L +F ++ L + YLKS F+ +Y+L
Sbjct: 1254 YVFLIVINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNL 1303
>AB028985-1|BAA83014.2| 1771|Homo sapiens KIAA1062 protein protein.
Length = 1771
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = -3
Query: 483 YIFLLFINIFL-----VSNVLDNVFWSNQSLCITIRYLKSKFIFHCHYDL 349
Y+FL+ IN+F+ V+ L +F ++ L + YLKS F+ +Y+L
Sbjct: 1240 YVFLIVINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNL 1289
>M99603-1|AAA59081.1| 108|Homo sapiens immunoglobulin kappa light
chain V region protein.
Length = 108
Score = 29.5 bits (63), Expect = 7.5
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Frame = +1
Query: 52 LRRSTTYRTSVTCRLST-----VALQQKFSTIKAAVKIYKSQALQNGVPQSHRYS-TGVQ 213
L S R ++TCR S +A Q+ + IYK+ +L++GVP S +G +
Sbjct: 11 LSASVGDRVTITCRASQSISTWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTE 70
Query: 214 SKLSVQEI--EERVLKVCKAYDKLS 282
L++ + ++ C+ YD+ S
Sbjct: 71 FTLTISSLQPDDFATYYCQQYDRYS 95
>AJ555983-1|CAD88691.1| 82|Homo sapiens immunoglobulin kappa light
chain variable region protein.
Length = 82
Score = 29.5 bits (63), Expect = 7.5
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 10/78 (12%)
Frame = +1
Query: 79 SVTCRLST-----VALQQKFSTIKAAVKIYKSQALQNGVPQSHRYS---TGVQSKLSVQE 234
++TCR S +A Q+ ++ IYK+ L+ GVP R+S +G + LS+
Sbjct: 1 TITCRASQSISSWLAWYQQKPGKAPSLLIYKASTLERGVPVPSRFSGSGSGTEFTLSISS 60
Query: 235 I--EERVLKVCKAYDKLS 282
+ ++ C+ YD S
Sbjct: 61 LQPDDFATYYCQQYDTYS 78
>AJ426154-1|CAD19844.1| 83|Homo sapiens immunoglobulin kappa light
chain variable region protein.
Length = 83
Score = 29.1 bits (62), Expect = 9.9
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Frame = +1
Query: 61 STTYRTSVTCRLST-----VALQQKFSTIKAAVKIYKSQALQNGVPQSHRYS-TGVQSKL 222
S YR ++TCR S +A Q+ + IYK+ +L++GVP S +G + L
Sbjct: 1 SVGYRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTL 60
Query: 223 SVQEIE 240
++ ++
Sbjct: 61 TISSLQ 66
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,158,313
Number of Sequences: 237096
Number of extensions: 1434383
Number of successful extensions: 3213
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3205
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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