Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331C04f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    24   0.82 
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   2.5  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   4.4  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         21   5.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   7.7  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.7  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 9/31 (29%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -3

Query: 216 FSSPNDTSSFVAYHKVRVSCSSL-YSTEKHC 127
           +S    T +  +YH++ + CS + +S  K+C
Sbjct: 65  YSGSKCTWTITSYHRINLKCSLVEFSENKNC 95


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +1

Query: 226 TNHWTLGIDGCANRIISMLHEAKEDAGIPKDQ 321
           + H TLG+   A R I  L E +    + K+Q
Sbjct: 82  SRHTTLGLLTKAKRFIKSLEERERKHAVHKEQ 113


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 290 ASCSMLMILLAHPSIPRVQ 234
           A   ++M+L+ HP  PR++
Sbjct: 150 AIVGIVMVLIIHPGDPRIK 168


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 375 CRISGQGQRFRSDVCKSGVC 434
           C I    QR +   C++GVC
Sbjct: 81  CAIRCLAQRRKGGSCRNGVC 100


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/32 (25%), Positives = 14/32 (43%)
 Frame = +3

Query: 375 CRISGQGQRFRSDVCKSGVCGVRHSRVPVHWS 470
           C+I+  G     +    G    R  ++PV W+
Sbjct: 774 CKIADFGLSREIESATEGAYTTRGGKIPVRWT 805


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 197 VSLGELKVSARTIGLLE*TDAPIG 268
           +SLG   +SA T+  +E    PIG
Sbjct: 682 LSLGSEALSAATVRFIEAEPQPIG 705


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,770
Number of Sequences: 438
Number of extensions: 2907
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)