Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331C01f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   0.71 
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   3.8  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   5.0  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   6.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   6.6  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   8.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.7  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   8.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 281  SPPPVMRLIDCQSTSRHHITPPWPLK 204
            +PP V   +D  ++S  H+ P W  K
Sbjct: 1013 APPQVTTGVDTGASSTEHMHPDWTTK 1038



 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 217  GGVIWCLDVD 246
            GG+IW LD+D
Sbjct: 1734 GGMIWALDLD 1743



 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 217  GGVIWCLDVD 246
            GG+IW LD+D
Sbjct: 2159 GGMIWALDLD 2168



 Score = 21.8 bits (44), Expect = 3.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +1

Query: 217  GGVIWCLDVD 246
            GG++W LD+D
Sbjct: 2657 GGMVWALDLD 2666


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 341 LDLSVAIFLPVSRSHNLQELSPPP 270
           LD  V+I +P+S  H   E  P P
Sbjct: 383 LDKGVSIMVPISGLHYDPEYYPDP 406


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 451 IDETVSGQAPILKWEITDSK 510
           ID   + +  +L W ITDS+
Sbjct: 238 IDGMAASKLNVLHWHITDSQ 257


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/34 (23%), Positives = 17/34 (50%)
 Frame = +3

Query: 294 VMGSGDRQEYCNTQIQLFCKNMQLQL*CISSCLY 395
           ++G G  +EY    +QL+ +       C+  C++
Sbjct: 136 ILGFGYFREYLAEAVQLYFQFYYTYFLCVIVCIF 169


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 235 LDVDWQSINLITGGG 279
           LD+ W SI+ ++ GG
Sbjct: 374 LDLSWNSISSLSHGG 388


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 445 RTIDETVSGQAPILKWEITDS 507
           RT+D   + +     W ITDS
Sbjct: 229 RTLDGMAASKLNSFHWHITDS 249


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 166 NVWWSLNGERLGTFNG 213
           N+ W+LNG  +   NG
Sbjct: 635 NISWTLNGHFIDQTNG 650


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 168 CLVVTERRTSWHFQ 209
           CL  T  RT W+FQ
Sbjct: 328 CLGGTITRTMWYFQ 341


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,847
Number of Sequences: 336
Number of extensions: 3198
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)