Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS331B10f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF411384-1|AAL60464.1| 386|Homo sapiens testis specific serine/... 34 0.26
BC058862-1|AAH58862.1| 589|Homo sapiens TSKS protein protein. 34 0.35
AF200923-1|AAF12819.3| 592|Homo sapiens testis-specific kinase ... 34 0.35
AL157392-4|CAI13126.1| 249|Homo sapiens PRP18 pre-mRNA processi... 33 0.80
AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain... 31 3.2
AK131399-1|BAD18546.1| 907|Homo sapiens protein ( Homo sapiens ... 31 3.2
AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain... 31 3.2
U51990-1|AAB41490.1| 342|Homo sapiens hPrp18 protein. 30 5.7
D87437-1|BAA13381.2| 1122|Homo sapiens KIAA0250 protein. 30 5.7
BC052565-1|AAH52565.1| 839|Homo sapiens SMG7 protein protein. 30 5.7
BC036381-1|AAH36381.1| 1178|Homo sapiens SMG7 protein protein. 30 5.7
BC000794-1|AAH00794.1| 342|Homo sapiens PRP18 pre-mRNA processi... 30 5.7
AY386363-1|AAR25620.1| 802|Homo sapiens breast cancer-associate... 30 5.7
AL449223-4|CAI16627.1| 1137|Homo sapiens Smg-7 homolog, nonsense... 30 5.7
AL157392-3|CAI13125.1| 167|Homo sapiens PRP18 pre-mRNA processi... 30 5.7
AL157392-1|CAI13123.1| 342|Homo sapiens PRP18 pre-mRNA processi... 30 5.7
AL137800-13|CAI19486.1| 1137|Homo sapiens Smg-7 homolog, nonsens... 30 5.7
AL137800-3|CAI19478.1| 1099|Homo sapiens Smg-7 homolog, nonsense... 30 5.7
AB085674-2|BAC53622.1| 1071|Homo sapiens SMG-7 transcript varian... 30 5.7
AB085674-1|BAC53621.1| 1137|Homo sapiens SMG-7 protein. 30 5.7
M21121-1|AAA36725.1| 91|Homo sapiens protein ( Human T cell-sp... 29 7.5
DQ017060-1|AAY22177.1| 91|Homo sapiens chemokine (C-C motif) l... 29 7.5
BC008600-1|AAH08600.1| 91|Homo sapiens chemokine (C-C motif) l... 29 7.5
AF266753-1|AAF73070.1| 91|Homo sapiens beta-chemokine RANTES p... 29 7.5
AF088219-8|AAC63331.1| 91|Homo sapiens small inducible cytokin... 29 7.5
AF043341-1|AAC03541.1| 91|Homo sapiens RANTES precursor protein. 29 7.5
AB083611-1|BAB89324.1| 401|Homo sapiens putative G-protein coup... 29 7.5
>AF411384-1|AAL60464.1| 386|Homo sapiens testis specific
serine/threonine kinase substrate protein.
Length = 386
Score = 34.3 bits (75), Expect = 0.26
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +3
Query: 96 LQNNDPKRPKETLQPPVSKQEPAEKESPILFLTYAQDGLPTAINIQ 233
LQ+ P+R + LQ P KQEP EK+ P L++ +GL A Q
Sbjct: 31 LQDETPRRQEAELQEPEEKQEPEEKQKPEAGLSW--NGLGPAATSQ 74
>BC058862-1|AAH58862.1| 589|Homo sapiens TSKS protein protein.
Length = 589
Score = 33.9 bits (74), Expect = 0.35
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 96 LQNNDPKRPKETLQPPVSKQEPAEKESP 179
LQ+ P+R + LQ P KQEP EK+ P
Sbjct: 231 LQDETPRRQEAELQEPEEKQEPEEKQEP 258
>AF200923-1|AAF12819.3| 592|Homo sapiens testis-specific kinase
substrate protein.
Length = 592
Score = 33.9 bits (74), Expect = 0.35
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 96 LQNNDPKRPKETLQPPVSKQEPAEKESP 179
LQ+ P+R + LQ P KQEP EK+ P
Sbjct: 231 LQDETPRRQEAELQEPEEKQEPEEKQEP 258
>AL157392-4|CAI13126.1| 249|Homo sapiens PRP18 pre-mRNA processing
factor 18 homolog (S. cerevisiae) protein.
Length = 249
Score = 32.7 bits (71), Expect = 0.80
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 114 KRPKETLQPPVSKQEPAEKESPILFLTYAQDGLPTAINIQEYVSNWTE 257
++P +QP Q+P +P+L L A++ LP ++ QE + E
Sbjct: 37 EKPSGEIQPKEEDQKPLTSSNPVLELELAEEKLPMTLSRQEVIRRLRE 84
>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
protein protein.
Length = 3567
Score = 30.7 bits (66), Expect = 3.2
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +3
Query: 24 GKKEIVTLKNLPNDLPAALNKNIVLQNNDPKRPKETLQPPVSKQEPAEKESPILFLTYAQ 203
G K + L + +D P A Q PK+P+ +PP + Q P + +T Q
Sbjct: 2379 GTKPALPLASTSSDPPQASTAQPQPQPQPPKQPQLIGRPPSASQTPVPSSPLQISMTSLQ 2438
Query: 204 DGLP 215
+ LP
Sbjct: 2439 NSLP 2442
>AK131399-1|BAD18546.1| 907|Homo sapiens protein ( Homo sapiens
cDNA FLJ16492 fis, clone CTONG2028758, highly similar
to Mus musculus zfh-4 mRNA for zinc-finger homeodomain
protein 4. ).
Length = 907
Score = 30.7 bits (66), Expect = 3.2
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +3
Query: 24 GKKEIVTLKNLPNDLPAALNKNIVLQNNDPKRPKETLQPPVSKQEPAEKESPILFLTYAQ 203
G K + L + +D P A Q PK+P+ +PP + Q P + +T Q
Sbjct: 115 GTKPALPLASTSSDPPQASTAQPQPQPQPPKQPQLIGRPPSASQTPVPSSPLQISMTSLQ 174
Query: 204 DGLP 215
+ LP
Sbjct: 175 NSLP 178
>AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain
protein 4 protein.
Length = 3599
Score = 30.7 bits (66), Expect = 3.2
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +3
Query: 24 GKKEIVTLKNLPNDLPAALNKNIVLQNNDPKRPKETLQPPVSKQEPAEKESPILFLTYAQ 203
G K + L + +D P A Q PK+P+ +PP + Q P + +T Q
Sbjct: 2407 GTKPALPLASTSSDPPQASTAQPQPQPQPPKQPQLIGRPPSASQTPVPSSPLQISMTSLQ 2466
Query: 204 DGLP 215
+ LP
Sbjct: 2467 NSLP 2470
>U51990-1|AAB41490.1| 342|Homo sapiens hPrp18 protein.
Length = 342
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 132 LQPPVSKQEPAEKESPILFLTYAQDGLPTAINIQEYVSNWTE 257
+QP Q+P +P+L L A++ LP ++ QE + E
Sbjct: 49 IQPKEEDQKPLTSSNPVLELELAEEKLPMTLSRQEVIRRLRE 90
>D87437-1|BAA13381.2| 1122|Homo sapiens KIAA0250 protein.
Length = 1122
Score = 29.9 bits (64), Expect = 5.7
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 96 LQNNDP-KRPKETLQPPVSKQEPAEKE-SPILFLTYAQDGLPTAINIQEY 239
LQ DP K + +LQPPV +Q+P EK+ P Y + P+ + + E+
Sbjct: 807 LQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHN--PSEVKVPEF 854
>BC052565-1|AAH52565.1| 839|Homo sapiens SMG7 protein protein.
Length = 839
Score = 29.9 bits (64), Expect = 5.7
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 96 LQNNDP-KRPKETLQPPVSKQEPAEKE-SPILFLTYAQDGLPTAINIQEY 239
LQ DP K + +LQPPV +Q+P EK+ P Y + P+ + + E+
Sbjct: 524 LQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHN--PSEVKVPEF 571
>BC036381-1|AAH36381.1| 1178|Homo sapiens SMG7 protein protein.
Length = 1178
Score = 29.9 bits (64), Expect = 5.7
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 96 LQNNDP-KRPKETLQPPVSKQEPAEKE-SPILFLTYAQDGLPTAINIQEY 239
LQ DP K + +LQPPV +Q+P EK+ P Y + P+ + + E+
Sbjct: 776 LQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHN--PSEVKVPEF 823
>BC000794-1|AAH00794.1| 342|Homo sapiens PRP18 pre-mRNA processing
factor 18 homolog (S. cerevisiae) protein.
Length = 342
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 132 LQPPVSKQEPAEKESPILFLTYAQDGLPTAINIQEYVSNWTE 257
+QP Q+P +P+L L A++ LP ++ QE + E
Sbjct: 49 IQPKEEDQKPLTSSNPVLELELAEEKLPMTLSRQEVIRRLRE 90
>AY386363-1|AAR25620.1| 802|Homo sapiens breast cancer-associated
antigen SGA-56M protein.
Length = 802
Score = 29.9 bits (64), Expect = 5.7
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 96 LQNNDP-KRPKETLQPPVSKQEPAEKE-SPILFLTYAQDGLPTAINIQEY 239
LQ DP K + +LQPPV +Q+P EK+ P Y + P+ + + E+
Sbjct: 487 LQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHN--PSEVKVPEF 534
>AL449223-4|CAI16627.1| 1137|Homo sapiens Smg-7 homolog, nonsense
mediated mRNA decay factor (C. elegans) protein.
Length = 1137
Score = 29.9 bits (64), Expect = 5.7
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 96 LQNNDP-KRPKETLQPPVSKQEPAEKE-SPILFLTYAQDGLPTAINIQEY 239
LQ DP K + +LQPPV +Q+P EK+ P Y + P+ + + E+
Sbjct: 822 LQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHN--PSEVKVPEF 869
>AL157392-3|CAI13125.1| 167|Homo sapiens PRP18 pre-mRNA processing
factor 18 homolog (S. cerevisiae) protein.
Length = 167
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 132 LQPPVSKQEPAEKESPILFLTYAQDGLPTAINIQEYVSNWTE 257
+QP Q+P +P+L L A++ LP ++ QE + E
Sbjct: 34 IQPKEEDQKPLTSSNPVLELELAEEKLPMTLSRQEVIRRLRE 75
>AL157392-1|CAI13123.1| 342|Homo sapiens PRP18 pre-mRNA processing
factor 18 homolog (S. cerevisiae) protein.
Length = 342
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 132 LQPPVSKQEPAEKESPILFLTYAQDGLPTAINIQEYVSNWTE 257
+QP Q+P +P+L L A++ LP ++ QE + E
Sbjct: 49 IQPKEEDQKPLTSSNPVLELELAEEKLPMTLSRQEVIRRLRE 90
>AL137800-13|CAI19486.1| 1137|Homo sapiens Smg-7 homolog, nonsense
mediated mRNA decay factor (C. elegans) protein.
Length = 1137
Score = 29.9 bits (64), Expect = 5.7
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 96 LQNNDP-KRPKETLQPPVSKQEPAEKE-SPILFLTYAQDGLPTAINIQEY 239
LQ DP K + +LQPPV +Q+P EK+ P Y + P+ + + E+
Sbjct: 822 LQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHN--PSEVKVPEF 869
>AL137800-3|CAI19478.1| 1099|Homo sapiens Smg-7 homolog, nonsense
mediated mRNA decay factor (C. elegans) protein.
Length = 1099
Score = 29.9 bits (64), Expect = 5.7
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 96 LQNNDP-KRPKETLQPPVSKQEPAEKE-SPILFLTYAQDGLPTAINIQEY 239
LQ DP K + +LQPPV +Q+P EK+ P Y + P+ + + E+
Sbjct: 734 LQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHN--PSEVKVPEF 781
>AB085674-2|BAC53622.1| 1071|Homo sapiens SMG-7 transcript variant 2
protein.
Length = 1071
Score = 29.9 bits (64), Expect = 5.7
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 96 LQNNDP-KRPKETLQPPVSKQEPAEKE-SPILFLTYAQDGLPTAINIQEY 239
LQ DP K + +LQPPV +Q+P EK+ P Y + P+ + + E+
Sbjct: 756 LQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHN--PSEVKVPEF 803
>AB085674-1|BAC53621.1| 1137|Homo sapiens SMG-7 protein.
Length = 1137
Score = 29.9 bits (64), Expect = 5.7
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 96 LQNNDP-KRPKETLQPPVSKQEPAEKE-SPILFLTYAQDGLPTAINIQEY 239
LQ DP K + +LQPPV +Q+P EK+ P Y + P+ + + E+
Sbjct: 822 LQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHN--PSEVKVPEF 869
>M21121-1|AAA36725.1| 91|Homo sapiens protein ( Human T
cell-specific protein (RANTES) mRNA, complete cds. ).
Length = 91
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +3
Query: 141 PVSKQEPAEKESPILFLTYAQDGLPTAINIQEYVSNWTEIPNVKVITLNNRREETYQNPE 320
P S + +P F Y LP A +I+EY + N V+ + + + NPE
Sbjct: 20 PASASPYSSDTTPCCF-AYIARPLPRA-HIKEYFYTSGKCSNPAVVFVTRKNRQVCANPE 77
Query: 321 -KFIREYFEKAD 353
K++REY +
Sbjct: 78 KKWVREYINSLE 89
>DQ017060-1|AAY22177.1| 91|Homo sapiens chemokine (C-C motif)
ligand 5 protein.
Length = 91
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +3
Query: 141 PVSKQEPAEKESPILFLTYAQDGLPTAINIQEYVSNWTEIPNVKVITLNNRREETYQNPE 320
P S + +P F Y LP A +I+EY + N V+ + + + NPE
Sbjct: 20 PASASPYSSDTTPCCF-AYIARPLPRA-HIKEYFYTSGKCSNPAVVFVTRKNRQVCANPE 77
Query: 321 -KFIREYFEKAD 353
K++REY +
Sbjct: 78 KKWVREYINSLE 89
>BC008600-1|AAH08600.1| 91|Homo sapiens chemokine (C-C motif)
ligand 5 protein.
Length = 91
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +3
Query: 141 PVSKQEPAEKESPILFLTYAQDGLPTAINIQEYVSNWTEIPNVKVITLNNRREETYQNPE 320
P S + +P F Y LP A +I+EY + N V+ + + + NPE
Sbjct: 20 PASASPYSSDTTPCCF-AYIARPLPRA-HIKEYFYTSGKCSNPAVVFVTRKNRQVCANPE 77
Query: 321 -KFIREYFEKAD 353
K++REY +
Sbjct: 78 KKWVREYINSLE 89
>AF266753-1|AAF73070.1| 91|Homo sapiens beta-chemokine RANTES
precursor protein.
Length = 91
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +3
Query: 141 PVSKQEPAEKESPILFLTYAQDGLPTAINIQEYVSNWTEIPNVKVITLNNRREETYQNPE 320
P S + +P F Y LP A +I+EY + N V+ + + + NPE
Sbjct: 20 PASASPYSSDTTPCCF-AYIARPLPRA-HIKEYFYTSGKCSNPAVVFVTRKNRQVCANPE 77
Query: 321 -KFIREYFEKAD 353
K++REY +
Sbjct: 78 KKWVREYINSLE 89
>AF088219-8|AAC63331.1| 91|Homo sapiens small inducible cytokine
A5 precursor protein.
Length = 91
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +3
Query: 141 PVSKQEPAEKESPILFLTYAQDGLPTAINIQEYVSNWTEIPNVKVITLNNRREETYQNPE 320
P S + +P F Y LP A +I+EY + N V+ + + + NPE
Sbjct: 20 PASASPYSSDTTPCCF-AYIARPLPRA-HIKEYFYTSGKCSNPAVVFVTRKNRQVCANPE 77
Query: 321 -KFIREYFEKAD 353
K++REY +
Sbjct: 78 KKWVREYINSLE 89
>AF043341-1|AAC03541.1| 91|Homo sapiens RANTES precursor protein.
Length = 91
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +3
Query: 141 PVSKQEPAEKESPILFLTYAQDGLPTAINIQEYVSNWTEIPNVKVITLNNRREETYQNPE 320
P S + +P F Y LP A +I+EY + N V+ + + + NPE
Sbjct: 20 PASASPYSSDTTPCCF-AYIARPLPRA-HIKEYFYTSGKCSNPAVVFVTRKNRQVCANPE 77
Query: 321 -KFIREYFEKAD 353
K++REY +
Sbjct: 78 KKWVREYINSLE 89
>AB083611-1|BAB89324.1| 401|Homo sapiens putative G-protein coupled
receptor protein.
Length = 401
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 431 LCCIWYIFVV*GYFIYISCCYDWHNVVS 348
LCC W+ FVV G +++ C W +VV+
Sbjct: 305 LCCGWF-FVVGGSLLWMVLCCGWFSVVN 331
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,547,088
Number of Sequences: 237096
Number of extensions: 1374267
Number of successful extensions: 7442
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 7265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7438
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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