Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331B08f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   4.7  
AJ618920-1|CAF01999.1|  204|Anopheles gambiae putative odorant-b...    23   6.2  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   8.2  
AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenin...    23   8.2  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +3

Query: 396 GNTSGACRCYSRFLVYQQSNVTTYVTSGSMF 488
           G++  A +C+ + L  Q  N  T    GS++
Sbjct: 354 GDSENAAQCFEKVLKAQPGNYETMKILGSLY 384


>AJ618920-1|CAF01999.1|  204|Anopheles gambiae putative
           odorant-binding protein OBPjj4 protein.
          Length = 204

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 514 TESQCHYAINILPEVTYVVT 455
           T  QCH +IN+  E T  VT
Sbjct: 124 TVKQCHESINVDSEFTRYVT 143


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 235 ILYGYFFTMFKISPVC 188
           +L+G +FT+F +  VC
Sbjct: 3   LLHGVYFTIFAVVSVC 18


>AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenine
           transaminase protein.
          Length = 396

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 309 IIPRNSMWWKNTQY 268
           +IP+   WWK +QY
Sbjct: 321 MIPKGVDWWKVSQY 334


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 555,290
Number of Sequences: 2352
Number of extensions: 11313
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)