Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331B08f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061443-1|AAL28991.1|  197|Drosophila melanogaster LD38087p pro...   152   2e-37
AE014297-350|AAF51956.1|  197|Drosophila melanogaster CG10978-PB...   152   2e-37
AE014297-349|AAN14321.1|  197|Drosophila melanogaster CG10978-PA...   152   2e-37

>AY061443-1|AAL28991.1|  197|Drosophila melanogaster LD38087p
           protein.
          Length = 197

 Score =  152 bits (369), Expect = 2e-37
 Identities = 65/122 (53%), Positives = 87/122 (71%)
 Frame = +2

Query: 155 MASRGGVMVTGTNGADFEHREKVAIQYHISALNKSRLKYCVFFHHILFLGMMAKLSADVL 334
           MA+RGG MV GT+G DFE R++VA  Y IS LNKSRLKYC+FFH +LF  M+AKL++D+L
Sbjct: 1   MATRGGPMVAGTDGNDFEFRQRVAGTYQISLLNKSRLKYCIFFHALLFFVMLAKLTSDIL 60

Query: 335 DKLDIFILEVEELQIPPPLWWEYIWCXXXXXXXXXXXAIKRNNIRHLRQYVYGIVALGFC 514
           D LDIF+LE+EEL++PPPLWWEY+W            A + N +R +++Y+  I+     
Sbjct: 61  DHLDIFVLEIEELEVPPPLWWEYVWAASLLTSFLGLSAARGNKVREMQKYMVAILLFAIL 120

Query: 515 PL 520
           PL
Sbjct: 121 PL 122


>AE014297-350|AAF51956.1|  197|Drosophila melanogaster CG10978-PB,
           isoform B protein.
          Length = 197

 Score =  152 bits (369), Expect = 2e-37
 Identities = 65/122 (53%), Positives = 87/122 (71%)
 Frame = +2

Query: 155 MASRGGVMVTGTNGADFEHREKVAIQYHISALNKSRLKYCVFFHHILFLGMMAKLSADVL 334
           MA+RGG MV GT+G DFE R++VA  Y IS LNKSRLKYC+FFH +LF  M+AKL++D+L
Sbjct: 1   MATRGGPMVAGTDGNDFEFRQRVAGTYQISLLNKSRLKYCIFFHALLFFVMLAKLTSDIL 60

Query: 335 DKLDIFILEVEELQIPPPLWWEYIWCXXXXXXXXXXXAIKRNNIRHLRQYVYGIVALGFC 514
           D LDIF+LE+EEL++PPPLWWEY+W            A + N +R +++Y+  I+     
Sbjct: 61  DHLDIFVLEIEELEVPPPLWWEYVWAASLLTSFLGLSAARGNKVREMQKYMVAILLFAIL 120

Query: 515 PL 520
           PL
Sbjct: 121 PL 122


>AE014297-349|AAN14321.1|  197|Drosophila melanogaster CG10978-PA,
           isoform A protein.
          Length = 197

 Score =  152 bits (369), Expect = 2e-37
 Identities = 65/122 (53%), Positives = 87/122 (71%)
 Frame = +2

Query: 155 MASRGGVMVTGTNGADFEHREKVAIQYHISALNKSRLKYCVFFHHILFLGMMAKLSADVL 334
           MA+RGG MV GT+G DFE R++VA  Y IS LNKSRLKYC+FFH +LF  M+AKL++D+L
Sbjct: 1   MATRGGPMVAGTDGNDFEFRQRVAGTYQISLLNKSRLKYCIFFHALLFFVMLAKLTSDIL 60

Query: 335 DKLDIFILEVEELQIPPPLWWEYIWCXXXXXXXXXXXAIKRNNIRHLRQYVYGIVALGFC 514
           D LDIF+LE+EEL++PPPLWWEY+W            A + N +R +++Y+  I+     
Sbjct: 61  DHLDIFVLEIEELEVPPPLWWEYVWAASLLTSFLGLSAARGNKVREMQKYMVAILLFAIL 120

Query: 515 PL 520
           PL
Sbjct: 121 PL 122


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,265,394
Number of Sequences: 53049
Number of extensions: 478389
Number of successful extensions: 900
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 900
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)