Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331B04f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061489-1|AAL29037.2|  271|Drosophila melanogaster LD45244p pro...   100   1e-21
AE013599-2912|AAF57546.1|  244|Drosophila melanogaster CG11242-P...   100   1e-21
AY118538-1|AAM49907.1| 1229|Drosophila melanogaster LD27166p pro...    28   8.8  
AE014296-3668|AAO41285.1| 1229|Drosophila melanogaster CG11471-P...    28   8.8  
AE014296-3667|AAF51823.2| 1229|Drosophila melanogaster CG11471-P...    28   8.8  
AE014296-3666|AAF51822.2| 1229|Drosophila melanogaster CG11471-P...    28   8.8  

>AY061489-1|AAL29037.2|  271|Drosophila melanogaster LD45244p
           protein.
          Length = 271

 Score =  100 bits (239), Expect = 1e-21
 Identities = 48/127 (37%), Positives = 84/127 (66%)
 Frame = +2

Query: 107 DYVNVHITKSDNEDAAPIERRFKKGINILEFKTKLELLTGGSPTTMKLKLYDKKNNFVCD 286
           D++ V+++ S N DA   E +  K + + + KTKLE+LTGG   TMK++++ K +  V  
Sbjct: 38  DFIKVNVSNSHN-DAVAFEVKLAKDLTVAQLKTKLEILTGGCAGTMKVQVF-KGDTCVST 95

Query: 287 IEDDEKLLGSYPIDDGMRIHVIDKFSLVNDFATSDSAERFRLSEEDYEKKGDTLRSFLQR 466
           +++++  LG Y   DG+R+HV+D F+  +    S   E+F LS++ YE++ D++R++L+ 
Sbjct: 96  MDNNDAQLGYYANSDGLRLHVVDSFATFS--FDSAPVEKFELSKDQYEQRTDSVRNYLKI 153

Query: 467 NRLGKYN 487
           NR+GKYN
Sbjct: 154 NRMGKYN 160


>AE013599-2912|AAF57546.1|  244|Drosophila melanogaster CG11242-PA
           protein.
          Length = 244

 Score =  100 bits (239), Expect = 1e-21
 Identities = 48/127 (37%), Positives = 84/127 (66%)
 Frame = +2

Query: 107 DYVNVHITKSDNEDAAPIERRFKKGINILEFKTKLELLTGGSPTTMKLKLYDKKNNFVCD 286
           D++ V+++ S N DA   E +  K + + + KTKLE+LTGG   TMK++++ K +  V  
Sbjct: 11  DFIKVNVSNSHN-DAVAFEVKLAKDLTVAQLKTKLEILTGGCAGTMKVQVF-KGDTCVST 68

Query: 287 IEDDEKLLGSYPIDDGMRIHVIDKFSLVNDFATSDSAERFRLSEEDYEKKGDTLRSFLQR 466
           +++++  LG Y   DG+R+HV+D F+  +    S   E+F LS++ YE++ D++R++L+ 
Sbjct: 69  MDNNDAQLGYYANSDGLRLHVVDSFATFS--FDSAPVEKFELSKDQYEQRTDSVRNYLKI 126

Query: 467 NRLGKYN 487
           NR+GKYN
Sbjct: 127 NRMGKYN 133


>AY118538-1|AAM49907.1| 1229|Drosophila melanogaster LD27166p protein.
          Length = 1229

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
 Frame = +2

Query: 287  IEDDEKLLGSYPIDDGMRIH----VIDKFSLVNDFATSDSAERFRLSEEDYEKKGDTLRS 454
            + D   L   YP+ + + IH    +++    + DF  S+   R      D EK G TLR+
Sbjct: 849  MRDRRTLPVKYPVSEIIAIHKDSQILEAIKTLQDFILSELNVRKLTLSSDKEKYGVTLRA 908

Query: 455  FLQRNRLGK 481
                  LG+
Sbjct: 909  EPDHKALGQ 917


>AE014296-3668|AAO41285.1| 1229|Drosophila melanogaster CG11471-PD,
            isoform D protein.
          Length = 1229

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
 Frame = +2

Query: 287  IEDDEKLLGSYPIDDGMRIH----VIDKFSLVNDFATSDSAERFRLSEEDYEKKGDTLRS 454
            + D   L   YP+ + + IH    +++    + DF  S+   R      D EK G TLR+
Sbjct: 849  MRDRRTLPVKYPVSEIIAIHKDSQILEAIKTLQDFILSELNVRKLTLSSDKEKYGVTLRA 908

Query: 455  FLQRNRLGK 481
                  LG+
Sbjct: 909  EPDHKALGQ 917


>AE014296-3667|AAF51823.2| 1229|Drosophila melanogaster CG11471-PC,
            isoform C protein.
          Length = 1229

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
 Frame = +2

Query: 287  IEDDEKLLGSYPIDDGMRIH----VIDKFSLVNDFATSDSAERFRLSEEDYEKKGDTLRS 454
            + D   L   YP+ + + IH    +++    + DF  S+   R      D EK G TLR+
Sbjct: 849  MRDRRTLPVKYPVSEIIAIHKDSQILEAIKTLQDFILSELNVRKLTLSSDKEKYGVTLRA 908

Query: 455  FLQRNRLGK 481
                  LG+
Sbjct: 909  EPDHKALGQ 917


>AE014296-3666|AAF51822.2| 1229|Drosophila melanogaster CG11471-PA,
            isoform A protein.
          Length = 1229

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
 Frame = +2

Query: 287  IEDDEKLLGSYPIDDGMRIH----VIDKFSLVNDFATSDSAERFRLSEEDYEKKGDTLRS 454
            + D   L   YP+ + + IH    +++    + DF  S+   R      D EK G TLR+
Sbjct: 849  MRDRRTLPVKYPVSEIIAIHKDSQILEAIKTLQDFILSELNVRKLTLSSDKEKYGVTLRA 908

Query: 455  FLQRNRLGK 481
                  LG+
Sbjct: 909  EPDHKALGQ 917


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,304,724
Number of Sequences: 53049
Number of extensions: 398795
Number of successful extensions: 1229
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1223
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)