Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS331B04f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77663-3|CAB01212.1| 229|Caenorhabditis elegans Hypothetical pr... 68 4e-12
Z66500-13|CAA91312.1| 1780|Caenorhabditis elegans Hypothetical p... 31 0.50
Z48334-10|CAA88315.1| 1780|Caenorhabditis elegans Hypothetical p... 31 0.50
AF043699-1|AAB97563.2| 202|Caenorhabditis elegans Hypothetical ... 31 0.50
Z74041-4|CAD56597.1| 394|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z74041-3|CAA98522.1| 368|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich ... 29 2.7
AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related... 29 2.7
>Z77663-3|CAB01212.1| 229|Caenorhabditis elegans Hypothetical
protein F53F4.3 protein.
Length = 229
Score = 68.1 bits (159), Expect = 4e-12
Identities = 29/104 (27%), Positives = 61/104 (58%)
Frame = +2
Query: 155 PIERRFKKGINILEFKTKLELLTGGSPTTMKLKLYDKKNNFVCDIEDDEKLLGSYPIDDG 334
P+E+++ G+++ + K KLEL+ G + +M+++L+D + ++ D K L + DG
Sbjct: 17 PMEKKYPAGMSLNDLKKKLELVVGTTVDSMRIQLFDGDDQLKGELTDGAKSLKDLGVRDG 76
Query: 335 MRIHVIDKFSLVNDFATSDSAERFRLSEEDYEKKGDTLRSFLQR 466
RIH +D DF E++ +S++ Y K+ D++R++ ++
Sbjct: 77 YRIHAVDVTGGNEDFKDESMVEKYEMSDDTYGKRTDSVRAWKKK 120
>Z66500-13|CAA91312.1| 1780|Caenorhabditis elegans Hypothetical
protein F10B5.7 protein.
Length = 1780
Score = 31.1 bits (67), Expect = 0.50
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 125 ITKSDNEDAAPIERRFKKGINILEFKTKLELLTGGSPTTMKLKLYDKKN 271
I+K ++ D API R F G +LEF L + S ++ L+++ +K+
Sbjct: 1586 ISKKEDADEAPILRNFDMGTMMLEFLRYLASQSFASAESISLRVFYEKD 1634
>Z48334-10|CAA88315.1| 1780|Caenorhabditis elegans Hypothetical
protein F10B5.7 protein.
Length = 1780
Score = 31.1 bits (67), Expect = 0.50
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 125 ITKSDNEDAAPIERRFKKGINILEFKTKLELLTGGSPTTMKLKLYDKKN 271
I+K ++ D API R F G +LEF L + S ++ L+++ +K+
Sbjct: 1586 ISKKEDADEAPILRNFDMGTMMLEFLRYLASQSFASAESISLRVFYEKD 1634
>AF043699-1|AAB97563.2| 202|Caenorhabditis elegans Hypothetical
protein K02F2.5 protein.
Length = 202
Score = 31.1 bits (67), Expect = 0.50
Identities = 24/87 (27%), Positives = 41/87 (47%)
Frame = +2
Query: 95 VITQDYVNVHITKSDNEDAAPIERRFKKGINILEFKTKLELLTGGSPTTMKLKLYDKKNN 274
++TQ + V + +AAP+E KG + K+ G PT L+ K+N
Sbjct: 6 IVTQSLLAVALLSVAMVEAAPLEST--KGATVKSTKSSSSKTKGYVPTPKALRR-GKRNV 62
Query: 275 FVCDIEDDEKLLGSYPIDDGMRIHVID 355
+ +I DD +LG+ +D +R + D
Sbjct: 63 ILDEIPDDSSVLGTE--EDVLREQLFD 87
>Z74041-4|CAD56597.1| 394|Caenorhabditis elegans Hypothetical
protein T03F7.7b protein.
Length = 394
Score = 28.7 bits (61), Expect = 2.7
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +2
Query: 260 DKKNNFVCDIEDDEKLLGSYPIDDGMRIHVIDKFSLVNDFATSDSAERFRLSEEDYEKKG 439
+K + + + KL+G I+D +D F+ VN D ERF +S+ +YE
Sbjct: 51 EKTRQKIIQLFEHRKLMGYEKIND------LDIFTTVN--IGKDCFERFHISQLNYEVTS 102
Query: 440 DTLRSFLQR 466
L F+Q+
Sbjct: 103 KNLHVFVQK 111
>Z74041-3|CAA98522.1| 368|Caenorhabditis elegans Hypothetical
protein T03F7.7a protein.
Length = 368
Score = 28.7 bits (61), Expect = 2.7
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +2
Query: 260 DKKNNFVCDIEDDEKLLGSYPIDDGMRIHVIDKFSLVNDFATSDSAERFRLSEEDYEKKG 439
+K + + + KL+G I+D +D F+ VN D ERF +S+ +YE
Sbjct: 51 EKTRQKIIQLFEHRKLMGYEKIND------LDIFTTVN--IGKDCFERFHISQLNYEVTS 102
Query: 440 DTLRSFLQR 466
L F+Q+
Sbjct: 103 KNLHVFVQK 111
>AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich
repeats, ras-likedomain, kinase protein 1 protein.
Length = 2395
Score = 28.7 bits (61), Expect = 2.7
Identities = 27/89 (30%), Positives = 42/89 (47%)
Frame = -3
Query: 396 ALSEVAKSLTRENLSMTCILIPSSIGYEPRSFSSSSISHTKLFFLSYNFNFIVVGDPPVS 217
AL E+ S R LS ++ +S G PR +S++ +T+ + N IVV DPP
Sbjct: 629 ALKELNASYNR--LSTLPMVARASRGERPRLNNSNNNFNTQS--PTQESNPIVVDDPPNV 684
Query: 216 SSNFVLNSRILIPFLNLRSIGAASSLSDF 130
+SN + + +NL + S DF
Sbjct: 685 TSNPLRRQNVWQASINLSKVDDDSLFPDF 713
>AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related
kinase protein.
Length = 2393
Score = 28.7 bits (61), Expect = 2.7
Identities = 27/89 (30%), Positives = 42/89 (47%)
Frame = -3
Query: 396 ALSEVAKSLTRENLSMTCILIPSSIGYEPRSFSSSSISHTKLFFLSYNFNFIVVGDPPVS 217
AL E+ S R LS ++ +S G PR +S++ +T+ + N IVV DPP
Sbjct: 627 ALKELNASYNR--LSTLPMVARASRGERPRLNNSNNNFNTQS--PTQESNPIVVDDPPNV 682
Query: 216 SSNFVLNSRILIPFLNLRSIGAASSLSDF 130
+SN + + +NL + S DF
Sbjct: 683 TSNPLRRQNVWQASINLSKVDDDSLFPDF 711
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,762,568
Number of Sequences: 27780
Number of extensions: 216850
Number of successful extensions: 639
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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