Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331B03f
         (347 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09951-1|CAA71082.1|  107|Anopheles gambiae histone H2a protein.       78   8e-17
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    27   0.26 
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    24   1.4  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            22   5.7  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    22   7.5  
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    22   7.5  

>Y09951-1|CAA71082.1|  107|Anopheles gambiae histone H2a protein.
          Length = 107

 Score = 78.2 bits (184), Expect = 8e-17
 Identities = 45/71 (63%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
 Frame = +3

Query: 129 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD-LKVKRITP 305
           LQFPVGRIHR L+    +  RVG  A VY AA++EYL AEVLELAGN ++D  K +RI P
Sbjct: 8   LQFPVGRIHRLLRKGNYAE-RVGPGAPVYLAAVMEYLAAEVLELAGNRARDNKKERRIIP 66

Query: 306 RHLQLAIRGDE 338
           R LQLAIR DE
Sbjct: 67  R-LQLAIRNDE 76


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 26.6 bits (56), Expect = 0.26
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 162 LKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAG 266
           L  R T H RV     ++  A L YL AE+  ++G
Sbjct: 464 LVTRFTDHVRVIEPIFIFVMAYLAYLNAEIFHMSG 498


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/16 (50%), Positives = 13/16 (81%), Gaps = 1/16 (6%)
 Frame = -1

Query: 245 CCKIF-QNSGRINCCR 201
           C ++F  N+GR++CCR
Sbjct: 328 CGRLFISNNGRVSCCR 343


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 159 HLKNRTTSHGRVGATAA 209
           HLK ++TS G+V  T A
Sbjct: 298 HLKEKSTSAGKVTGTPA 314


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 89  FTRIFTRFTTAHFETCTTL 33
           + R+FTRFT   F    TL
Sbjct: 554 YVRMFTRFTQEIFSALITL 572


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 61  VVKRVKILVKPRRKLSQD 114
           V K V+I  +PR KLSQD
Sbjct: 369 VYKMVEINNQPRIKLSQD 386


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 309,867
Number of Sequences: 2352
Number of extensions: 4845
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24935070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)