Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331B03f
         (347 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   0.59 
AJ876408-1|CAI45289.1|   52|Apis mellifera putative diuretic hor...    23   1.4  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    20   7.3  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    20   7.3  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    20   9.6  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         20   9.6  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    20   9.6  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    20   9.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    20   9.6  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.8 bits (49), Expect = 0.59
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -2

Query: 298 IRFTFKSLDAFPANSKTSAVRYSKIAAE*TAAVAPTRPW 182
           I+FT +    FP N+ +    +S +  E   A     PW
Sbjct: 90  IKFTTRDCSLFPGNALSCKETFSLLYYEFDVATKEPPPW 128


>AJ876408-1|CAI45289.1|   52|Apis mellifera putative diuretic
           hormone-I protein.
          Length = 52

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 46  VSKWAVVKRVKILVKPRRKLSQDQLEQDFSFPLEEFIG 159
           V+   V+++  +L   RRK  QDQ + D +  L E IG
Sbjct: 14  VNSMDVLRQRVLLELARRKALQDQAQIDANRRLLETIG 51


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 242 CKIFQNSGRINCCRS 198
           C++     + NCCRS
Sbjct: 389 CELHMQPRKKNCCRS 403


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 242 CKIFQNSGRINCCRS 198
           C++     + NCCRS
Sbjct: 389 CELHMQPRKKNCCRS 403


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +1

Query: 253 WSWREMR 273
           WSWRE R
Sbjct: 173 WSWREER 179


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +2

Query: 230 GISYSRGFGVGGKCV*RFKSEAYYSSALTT 319
           G SY+   G+ G  +    +  YYS   +T
Sbjct: 244 GESYTAQDGISGMALSPMTNNLYYSPVAST 273


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +2

Query: 230 GISYSRGFGVGGKCV*RFKSEAYYSSALTT 319
           G SY+   G+ G  +    +  YYS   +T
Sbjct: 244 GESYTAQDGISGMALSPMTNNLYYSPVAST 273


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +2

Query: 230 GISYSRGFGVGGKCV*RFKSEAYYSSALTT 319
           G SY+   G+ G  +    +  YYS   +T
Sbjct: 244 GESYTAQDGISGMALSPMTNNLYYSPVAST 273


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +1

Query: 253 WSWREMR 273
           WSWRE R
Sbjct: 173 WSWREER 179


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,537
Number of Sequences: 438
Number of extensions: 1559
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7936320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)