Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331A06f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC036407-1|AAH36407.1|  973|Homo sapiens chromosome 17 open read...    32   1.1  
AK097661-1|BAC05135.1|  531|Homo sapiens protein ( Homo sapiens ...    32   1.1  

>BC036407-1|AAH36407.1|  973|Homo sapiens chromosome 17 open reading
           frame 57 protein.
          Length = 973

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +1

Query: 268 ED*MLNEGEKMRDLTSCLTTGGVCGCKVKYASVTILDRDL*LQRY-EKLHYIKYKFYTKI 444
           ED  + EG  + ++TS      V GC +KY     L   L      +KL+    ++Y+KI
Sbjct: 290 EDVSITEGSPLNEITSDRKLSSVAGCYLKYKKKNSLSSKLPEPSISKKLNKKSNQYYSKI 349

Query: 445 LRNN 456
           + N+
Sbjct: 350 MEND 353


>AK097661-1|BAC05135.1|  531|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40342 fis, clone TESTI2032768. ).
          Length = 531

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +1

Query: 268 ED*MLNEGEKMRDLTSCLTTGGVCGCKVKYASVTILDRDL*LQRY-EKLHYIKYKFYTKI 444
           ED  + EG  + ++TS      V GC +KY     L   L      +KL+    ++Y+KI
Sbjct: 242 EDVSITEGSPLNEITSDRKLSSVAGCYLKYKKKNSLSSKLPEPSISKKLNKKSNQYYSKI 301

Query: 445 LRNN 456
           + N+
Sbjct: 302 MEND 305


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,507,257
Number of Sequences: 237096
Number of extensions: 1493385
Number of successful extensions: 2501
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2500
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)