Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331A04f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   1.4  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               21   5.8  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   7.7  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   7.7  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   7.7  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -1

Query: 254  LEFTSGGDAAKGAAI 210
            L FTSGGD  K A I
Sbjct: 1157 LAFTSGGDGVKSAPI 1171


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/32 (28%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +1

Query: 328 ILLMFALCNISFGIM*C-KFSISPSQRDLKTD 420
           ++L+F LC +S+ ++ C   ++   Q +L  D
Sbjct: 5   VILLFTLCIVSYMMVRCDDITLCLKQENLNLD 36


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 154 ILPFIIMLVKGTCRHFSVC 98
           ++  + M   G CR+FS C
Sbjct: 102 LMAILRMSADGGCRNFSTC 120


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 154 ILPFIIMLVKGTCRHFSVC 98
           ++  + M   G CR+FS C
Sbjct: 101 LMAILRMSADGGCRNFSTC 119


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 158 PNFAVHYYVSKRNLQTLQCM 99
           PNFA  Y     N Q L+C+
Sbjct: 795 PNFADFYSEESINNQGLECL 814


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,436
Number of Sequences: 438
Number of extensions: 2630
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)