Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331A03f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024785-2|AAF60599.2|  467|Caenorhabditis elegans C-type lectin...    29   2.7  
Z78419-6|CAB01704.1|  487|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U88168-9|AAC24400.2|  211|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AF026207-2|AAK71372.1|  233|Caenorhabditis elegans Hypothetical ...    27   8.1  

>AC024785-2|AAF60599.2|  467|Caenorhabditis elegans C-type lectin
           protein 71 protein.
          Length = 467

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = +2

Query: 89  AYIRLHQKYTKQLFISNDVFMIMHVSYRLF*FAAKKKQMVDYFHDYS 229
           AY    + Y  Q   SN +     V++ +  F  ++ Q + YF+DY+
Sbjct: 181 AYSNDFEPYIVQNTFSNSILYKQQVTFAIIRFDTRQPQSIMYFNDYN 227


>Z78419-6|CAB01704.1|  487|Caenorhabditis elegans Hypothetical
           protein F26A3.6 protein.
          Length = 487

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +1

Query: 145 IHDNACFIPALLICSK 192
           +HD+  FIPAL+IC++
Sbjct: 46  VHDDQLFIPALVICNR 61


>U88168-9|AAC24400.2|  211|Caenorhabditis elegans Hypothetical
           protein K11H12.3 protein.
          Length = 211

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
 Frame = -3

Query: 474 TY*VYVLQQKRNMHAMRVINTQALLNLYIFSAITMHDAPYLFH*ANS------TLRVIRR 313
           T+ VYVL+  +++  M + +T  +LN  I   +  +D P +    +S       + +  R
Sbjct: 120 TFSVYVLKTTQSISKMGMKSTVVVLNTVIRQELIDYDMPRIMSYVSSINHTRIQMYIFNR 179

Query: 312 FILRRDGLSLAFI 274
             L R G+ L+ I
Sbjct: 180 IFLLRTGMMLSII 192


>AF026207-2|AAK71372.1|  233|Caenorhabditis elegans Hypothetical
           protein H42K12.2 protein.
          Length = 233

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -3

Query: 186 ANQKSRYETCIIMNTSFEINNCLVYFW 106
           A  + R +TC+  NT   + NCL +F+
Sbjct: 189 AETQKRTQTCLSSNTYQTLGNCLCWFY 215


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,807,939
Number of Sequences: 27780
Number of extensions: 246384
Number of successful extensions: 460
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 460
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)