Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS330H02f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY393036-1|AAS85974.1|  169|Homo sapiens immunoglobulin heavy ch...    29   9.9  
AM279594-1|CAK50713.1|  119|Homo sapiens immunoglobulin A heavy ...    29   9.9  

>AY393036-1|AAS85974.1|  169|Homo sapiens immunoglobulin heavy chain
           protein.
          Length = 169

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = -1

Query: 356 ILYSERSRHRPSL*TQLSSEPYLKRYKLIMFMWHEPRNSTRTKYCVNN 213
           I + + +R+ PSL T+L+      + ++++ M +     T T YCV+N
Sbjct: 41  IFWDDDNRYSPSLKTRLTITKDTSKSQVVLTMTNMDPVDTATYYCVHN 88


>AM279594-1|CAK50713.1|  119|Homo sapiens immunoglobulin A heavy
           chain variable region protein.
          Length = 119

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 13/56 (23%), Positives = 31/56 (55%)
 Frame = -1

Query: 359 SILYSERSRHRPSL*TQLSSEPYLKRYKLIMFMWHEPRNSTRTKYCVNNARKQTAY 192
           +I + + +R+ P+L T+L+      R+++++ M +     T T +C + A+   A+
Sbjct: 51  AIYWDDDARYNPTLETRLTITKDTSRHRVLLTMTNVDPVDTATYFCASRAQYHDAF 106


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,937,193
Number of Sequences: 237096
Number of extensions: 1122253
Number of successful extensions: 1510
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1510
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)