Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS330G12f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48054-1|CAA88131.1|  602|Homo sapiens peroxisomal targeting sig...    32   1.1  
X84899-1|CAA59324.1|  639|Homo sapiens peroxisomal C-terminal ta...    32   1.1  
U19721-1|AAC50103.1|  602|Homo sapiens peroxisomal targeting sig...    32   1.1  
BC010621-1|AAH10621.1|  631|Homo sapiens peroxisomal biogenesis ...    32   1.1  
X81479-1|CAA57232.1|  886|Homo sapiens EMR1 protein.                   30   5.7  
DQ217942-1|ABB70739.1|  886|Homo sapiens EGF-like module contain...    30   5.7  
BC059395-1|AAH59395.1|  821|Homo sapiens EMR1 protein protein.         30   5.7  
AK131562-1|BAD18695.1|  867|Homo sapiens protein ( Homo sapiens ...    30   5.7  
AB065918-1|BAC06133.1|  929|Homo sapiens seven transmembrane hel...    30   5.7  

>Z48054-1|CAA88131.1|  602|Homo sapiens peroxisomal targeting signal
           1 (SKL type) receptor protein.
          Length = 602

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -1

Query: 479 SSTIWTTLRMVCSFMGEHEAAKLVDDKNLNALNNFFSI 366
           S  IW+TLR+  S +G+ +A    D ++L+ L   F +
Sbjct: 563 SENIWSTLRLALSMLGQSDAYGAADARDLSTLLTMFGL 600


>X84899-1|CAA59324.1|  639|Homo sapiens peroxisomal C-terminal
           targeting signal import receptor protein.
          Length = 639

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -1

Query: 479 SSTIWTTLRMVCSFMGEHEAAKLVDDKNLNALNNFFSI 366
           S  IW+TLR+  S +G+ +A    D ++L+ L   F +
Sbjct: 600 SENIWSTLRLALSMLGQSDAYGAADARDLSTLLTMFGL 637


>U19721-1|AAC50103.1|  602|Homo sapiens peroxisomal targeting signal
           receptor 1 protein.
          Length = 602

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -1

Query: 479 SSTIWTTLRMVCSFMGEHEAAKLVDDKNLNALNNFFSI 366
           S  IW+TLR+  S +G+ +A    D ++L+ L   F +
Sbjct: 563 SENIWSTLRLALSMLGQSDAYGAADARDLSTLLTMFGL 600


>BC010621-1|AAH10621.1|  631|Homo sapiens peroxisomal biogenesis
           factor 5 protein.
          Length = 631

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -1

Query: 479 SSTIWTTLRMVCSFMGEHEAAKLVDDKNLNALNNFFSI 366
           S  IW+TLR+  S +G+ +A    D ++L+ L   F +
Sbjct: 592 SENIWSTLRLALSMLGQSDAYGAADARDLSTLLTMFGL 629


>X81479-1|CAA57232.1|  886|Homo sapiens EMR1 protein.
          Length = 886

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -2

Query: 232 FWIILEVIIIYIGCRGIFSETMISGKNMKTLH 137
           FW+++E +I+++  R +      S +N+K LH
Sbjct: 681 FWMLVEAVILFLMVRNLKVVNYFSSRNIKMLH 712


>DQ217942-1|ABB70739.1|  886|Homo sapiens EGF-like module containing
           mucin-like hormone receptor-like 1 protein.
          Length = 886

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -2

Query: 232 FWIILEVIIIYIGCRGIFSETMISGKNMKTLH 137
           FW+++E +I+++  R +      S +N+K LH
Sbjct: 681 FWMLVEAVILFLMVRNLKVVNYFSSRNIKMLH 712


>BC059395-1|AAH59395.1|  821|Homo sapiens EMR1 protein protein.
          Length = 821

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -2

Query: 232 FWIILEVIIIYIGCRGIFSETMISGKNMKTLH 137
           FW+++E +I+++  R +      S +N+K LH
Sbjct: 616 FWMLVEAVILFLMVRNLKVVNYFSSRNIKMLH 647


>AK131562-1|BAD18695.1|  867|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16811 fis, clone THYMU3024602, highly  similar
           to Cell surface glycoprotein EMR1 precursor. ).
          Length = 867

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -2

Query: 232 FWIILEVIIIYIGCRGIFSETMISGKNMKTLH 137
           FW+++E +I+++  R +      S +N+K LH
Sbjct: 629 FWMLVEAVILFLMVRNLKVVNYFSSRNIKMLH 660


>AB065918-1|BAC06133.1|  929|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 929

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -2

Query: 232 FWIILEVIIIYIGCRGIFSETMISGKNMKTLH 137
           FW+++E +I+++  R +      S +N+K LH
Sbjct: 701 FWMLVEAVILFLMVRNLKVVNYFSSRNIKMLH 732


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,847,535
Number of Sequences: 237096
Number of extensions: 1197382
Number of successful extensions: 2187
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2187
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)