Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS330G12f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70309-6|CAA94360.1|  324|Caenorhabditis elegans Hypothetical pr...    28   4.7  
AF039710-6|AAB96688.1|  392|Caenorhabditis elegans Hypothetical ...    28   4.7  

>Z70309-6|CAA94360.1|  324|Caenorhabditis elegans Hypothetical
           protein R102.6 protein.
          Length = 324

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = -1

Query: 476 STIWTTLRMVCSFMGEHEAAKLVDDKNLNALNNFFS 369
           S +W     +C F  + +  K+V  KN+N +   F+
Sbjct: 173 SVVWRAFVYICDFNMQRQIEKIVQKKNMNLIFLLFT 208


>AF039710-6|AAB96688.1|  392|Caenorhabditis elegans Hypothetical
           protein C46E10.3 protein.
          Length = 392

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = +3

Query: 126 PLVQCSVFIFFPLIIVSEKIPLHPIYIIITSKIIQNASVPHF 251
           P  QCSV  F P + +S  +P   I   I  KI   A VP F
Sbjct: 227 PFPQCSVINFVPSLAIS-SLPSTSIPATILPKIDNLAKVPSF 267


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,477,965
Number of Sequences: 27780
Number of extensions: 201445
Number of successful extensions: 520
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 520
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)