Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS330G08f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 243 1e-65
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 243 1e-65
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 157 9e-40
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 40 2e-04
SPAC227.18 |lys3|SPAC2F7.01|saccharopine dehydrogenase [NAD+, L-... 27 1.3
SPAC227.16c |||GINS complex subunit Psf3|Schizosaccharomyces pom... 27 1.3
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 27 2.2
SPBC32F12.09 |rum1||CDK inhibitor Rum1|Schizosaccharomyces pombe... 27 2.2
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 26 3.0
SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein |Schizo... 26 3.0
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 26 3.0
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 26 3.0
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 26 3.0
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 26 3.9
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 26 3.9
SPAC23H4.16c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 3.9
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 26 3.9
SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||M... 25 5.2
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 6.8
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 25 6.8
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 25 9.0
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 25 9.0
SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces... 25 9.0
SPBC1289.08 |||UDP-N-acetylglucosamine diphosphorylase |Schizosa... 25 9.0
SPBC405.01 |ade1|min4, SPBC4C3.02c|phosphoribosylamine-glycine l... 25 9.0
SPBC27B12.01c |mmm1|SPBC30B4.09c|Mdm10/Mdm12/Mmm1 complex subuni... 25 9.0
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 243 bits (594), Expect = 1e-65
Identities = 112/172 (65%), Positives = 132/172 (76%)
Frame = +3
Query: 3 YRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEK 182
YRE+V+E S LSKSPNKHNR+FM A+PM + L I+ G VNPRDDFK RAR + ++
Sbjct: 563 YRESVSEPSSMTALSKSPNKHNRIFMTAEPMSEELSVAIETGHVNPRDDFKVRARIMADE 622
Query: 183 YEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLR 362
+ +DVT+ARKIWCFGP+ TG N++VD +K V YLNEIKDSVVA F WA+KEG M EENLR
Sbjct: 623 FGWDVTDARKIWCFGPDTTGANVVVDQTKAVAYLNEIKDSVVAAFAWASKEGPMFEENLR 682
Query: 363 GVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQ 518
RFNI DV LH DAIHRGGGQIIPT RR +YA L A P + EPV+L EIQ
Sbjct: 683 SCRFNILDVVLHADAIHRGGGQIIPTARRVVYASTLLASPIIQEPVFLVEIQ 734
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 243 bits (594), Expect = 1e-65
Identities = 112/172 (65%), Positives = 132/172 (76%)
Frame = +3
Query: 3 YRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEK 182
YRE+V+E S LSKSPNKHNR+FM A+PM + L I+ G VNPRDDFK RAR + ++
Sbjct: 563 YRESVSEPSSMTALSKSPNKHNRIFMTAEPMSEELSVAIETGHVNPRDDFKVRARIMADE 622
Query: 183 YEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLR 362
+ +DVT+ARKIWCFGP+ TG N++VD +K V YLNEIKDSVVA F WA+KEG M EENLR
Sbjct: 623 FGWDVTDARKIWCFGPDTTGANVVVDQTKAVAYLNEIKDSVVAAFAWASKEGPMFEENLR 682
Query: 363 GVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQ 518
RFNI DV LH DAIHRGGGQIIPT RR +YA L A P + EPV+L EIQ
Sbjct: 683 SCRFNILDVVLHADAIHRGGGQIIPTARRVVYASTLLASPIIQEPVFLVEIQ 734
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 157 bits (381), Expect = 9e-40
Identities = 73/173 (42%), Positives = 103/173 (59%), Gaps = 4/173 (2%)
Frame = +3
Query: 9 ETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYE 188
ET + S C S +PNK NR+ M +P+ G+ DI+ G+VN K + + + Y+
Sbjct: 677 ETAVDTSSIKCFSDTPNKKNRITMVVEPLEKGISNDIENGKVNINWPQKRISEFFQKNYD 736
Query: 189 YDVTEARKIWCFGPEGTGPNILVDCSKGVQY----LNEIKDSVVAGFQWAAKEGVMAEEN 356
+D+ +R IW FGP+ G NIL D + LN +K+ + GFQW +EG + +E
Sbjct: 737 WDLLASRSIWAFGPDDRGTNILRDDTLSTDVDKNVLNSVKEYIKQGFQWGTREGPLCDET 796
Query: 357 LRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEI 515
+R V F + DV L + I+RGGGQIIPT RR Y+ LTA PRLMEPVY+ E+
Sbjct: 797 IRNVNFRLMDVVLAPEQIYRGGGQIIPTARRVCYSSFLTASPRLMEPVYMVEV 849
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1000
Score = 39.9 bits (89), Expect = 2e-04
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 24/149 (16%)
Frame = +3
Query: 144 DDFKTRARYLTEKYEYDVTEARK----IWCFGPEGTGPNILVDCSKGVQYL--------- 284
+ F R L E+ D+ E + I FGP+ GPNIL D +K ++
Sbjct: 724 EKFYERLSKLLEEENSDLGELKNHLDSIIAFGPKRVGPNILFDKTKKMRDFRRQSDETKL 783
Query: 285 --NEIKDSVVAGFQWAAKEGVMAEENLRGV-----RFNIYDVTLHTDAIHRGG----GQI 431
+++ + VV FQ +G + E ++G+ +F+I D + + + GQ+
Sbjct: 784 IPSDLSEYVVTAFQLITHQGPLCAEPVQGICVSIDQFDISDDSEDSKLLTINNPQIPGQV 843
Query: 432 IPTTRRCLYACLLTAQPRLMEPVYLCEIQ 518
I + + L PRLM +Y C++Q
Sbjct: 844 ISVVKESIRHGFLGWSPRLMLAMYSCDVQ 872
>SPAC227.18 |lys3|SPAC2F7.01|saccharopine dehydrogenase [NAD+,
L-lysine forming] |Schizosaccharomyces pombe|chr
1|||Manual
Length = 368
Score = 27.5 bits (58), Expect = 1.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 442 VVGMIWPPPLWMASVWSVTS*MLNRTPRKFSSAITPSLAA 323
V G+ PPPL + S+ + + + + FS A+ PSL A
Sbjct: 305 VKGVTTPPPLEVISIDHLPTLLPRESSEAFSEALIPSLLA 344
>SPAC227.16c |||GINS complex subunit Psf3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 166
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -2
Query: 418 PLWMASVWSVTS*MLNRTPRKFSSAITPSLAAHWNPATTESLISLRY 278
P W+A V ++ S + P FSS + +L A+ N + + + Y
Sbjct: 43 PFWLAEVLAINSFVSIHMPAPFSSVVRNALKANPNSVSIRDITTHYY 89
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 26.6 bits (56), Expect = 2.2
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +3
Query: 117 IDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNIL 254
++E + R+ + Y + + VT ++ + FGP GTG +L
Sbjct: 502 LEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLL 547
>SPBC32F12.09 |rum1||CDK inhibitor Rum1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 230
Score = 26.6 bits (56), Expect = 2.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 233 LGAKAPNLTGFGNIVFVLFCKIPSAS 156
+G PNL GN +F L ++PS+S
Sbjct: 169 IGILPPNLNSIGNKMFSLKSRVPSSS 194
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 26.2 bits (55), Expect = 3.0
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 105 LPEDIDEGRVNPRDDFKT 158
LPE IDEG+++ DD KT
Sbjct: 194 LPEKIDEGKLSDVDDGKT 211
>SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 391
Score = 26.2 bits (55), Expect = 3.0
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 497 RLHETGLSS*QTCIQASSS-CWNDLATTSMDGISMECYIIDVESNTTQI 354
++ ET L + ++S CW++L+TTS + + II + TT I
Sbjct: 191 QIQETSLGATTQEDESSDGICWDELSTTSPESSKVSEPIIQDNTQTTHI 239
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 26.2 bits (55), Expect = 3.0
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = -1
Query: 107 QTIRHGLSLHEQTVVLVGRL*E 42
+++RH +SL+E+T + +GRL E
Sbjct: 324 ESVRHLISLNEETWIQIGRLAE 345
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 26.2 bits (55), Expect = 3.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 42 LSKSPNKHNRLFMKAQPMPDGL 107
++KS KHN+L K +P+P L
Sbjct: 243 INKSVKKHNKLVKKHKPLPSTL 264
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 26.2 bits (55), Expect = 3.0
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +1
Query: 175 QKSTNTMLPKPVRFGALAPRVPAPTSWSIAPKEFSTSMKLRTLLWLDSS 321
++ T T L + GA P +P T WS+A T TL W+ ++
Sbjct: 140 ERKTLTHLRRISLQGADDPEIP--TDWSVAMSPPETEQDASTLFWVPAN 186
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 25.8 bits (54), Expect = 3.9
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 201 EARKIWCFGPEGTGPNILVD--CSKGVQYLNE 290
E + GP G+G ++LVD S+ Q +NE
Sbjct: 574 EGNSVIIVGPRGSGKSVLVDDILSRAAQEINE 605
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 25.8 bits (54), Expect = 3.9
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 260 IDQDVGAGTLGAKAPNLTGFGNIVFVLFCKIPSASLEVIAG 138
+D+D ++G P+LT +G+ VL +P A+ + +G
Sbjct: 317 LDEDSNDNSMGIIKPHLTFYGHEGPVLCVCVPKATHHIFSG 357
>SPAC23H4.16c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 328
Score = 25.8 bits (54), Expect = 3.9
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Frame = -1
Query: 518 LNFTKIYRLHETGLSS*QTCIQASSSCWND-----LAT--TSMDGISMECYIIDVESNTT 360
L+++K++ LH +Q S S +ND LA ++ + + Y++ E +
Sbjct: 192 LSYSKVFFLH---------LLQHSDSSFNDKFLLLLANIPVTVSNVEVLLYLLQQEESLA 242
Query: 359 QILFSHNSFLSGPLESSHNRVLN 291
Q + SFL L S HN+V N
Sbjct: 243 QFDLNGKSFLYHMLVSLHNQVTN 265
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 25.8 bits (54), Expect = 3.9
Identities = 21/96 (21%), Positives = 37/96 (38%)
Frame = -1
Query: 449 SSSCWNDLATTSMDGISMECYIIDVESNTTQILFSHNSFLSGPLESSHNRVLNFIEVLNS 270
SSS +N ++ GIS + + ++ SH S + L S F +
Sbjct: 3588 SSSVFNSTTVSTASGISQGSVLSSTRAIESESTASHRSSVLSELSSYDLSTSAFSSSSSE 3647
Query: 269 FGAIDQDVGAGTLGAKAPNLTGFGNIVFVLFCKIPS 162
+D V + +L + + F + V K+PS
Sbjct: 3648 PSTLDYSVSSSSLSSSIGVGSSFSSNSKVTSNKVPS 3683
>SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1317
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 279 YLNEIKDSVVAGFQWAAKEGVMAEENLRGVR 371
YL+ + +AGFQ G+ ++N +GVR
Sbjct: 248 YLSPVVRRYLAGFQSGFLHGLKTKDNSKGVR 278
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.0 bits (52), Expect = 6.8
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 118 LMRVA*IPAMTSRLALGILQKSTNTMLPKPVRFGALAPRVPAPTSWSIAPKEFS 279
L RV +P ++S+ L + +P P + AP VP PTS PK S
Sbjct: 1008 LARVPPVPKLSSKAPPVPLPSADAPPIPVP----STAPPVPIPTSTPPVPKSSS 1057
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 6 RETVAEESDQLCLSKSPNKHNRLFMKAQP 92
R T EE + L+KSP+ HNR+ P
Sbjct: 466 RLTDDEEREIRALAKSPDIHNRIIASMAP 494
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 199 PKPVRFGALAPRVPAPTSWSIAPKEFSTSMKLRTLLWLDSSGPL 330
P P + AP VP P S ++ T +L+ + D S P+
Sbjct: 1731 PPPPLPASSAPSVPNPGDRSALLQQIHTGTRLKKTVTTDKSKPI 1774
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 279 YLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIY 383
YLN + + FQ+ EGV+ L V NI+
Sbjct: 6 YLNHVIRGIYNDFQFLVDEGVVERSALDWVHANIH 40
>SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 490
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 317 ESSHNRVLNFIEVLNSFG 264
ESS N++LN E N FG
Sbjct: 421 ESSENKMLNLFEDYNEFG 438
>SPBC1289.08 |||UDP-N-acetylglucosamine diphosphorylase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 475
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 229 GPKHQILRASVTSYSYFS 176
G KH +LRA+ +Y YFS
Sbjct: 318 GHKHLLLRAANIAYHYFS 335
>SPBC405.01 |ade1|min4, SPBC4C3.02c|phosphoribosylamine-glycine
ligase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 788
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 381 YDVTLHTDAIHRGGGQIIPTTRRCLYACL 467
+DV + D + G G IIP T++ + L
Sbjct: 146 FDVVIKADGLAAGKGVIIPKTKKEAFEAL 174
>SPBC27B12.01c |mmm1|SPBC30B4.09c|Mdm10/Mdm12/Mmm1 complex subunit
Mmm1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 346
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 247 LGPVPSGPKHQILRASVTSYSYFS 176
L P P G KHQ+L YFS
Sbjct: 230 LHPSPGGLKHQVLNRITVIMIYFS 253
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,358,587
Number of Sequences: 5004
Number of extensions: 50927
Number of successful extensions: 162
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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