Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS330G05f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1147 + 24349811-24350161,24351031-24351366,24353260-243533... 32 0.24
11_02_0101 - 8306468-8307099,8307227-8307404,8307990-8308259 30 0.98
12_02_1058 - 25735902-25736000,25736085-25736152,25736575-257366... 30 1.3
10_07_0124 - 13085820-13085997,13086235-13086362,13086475-130865... 30 1.3
10_01_0088 + 1087807-1088282,1088752-1088974 30 1.3
06_03_0679 - 23464009-23464381,23464804-23464886,23466537-234667... 29 1.7
04_04_1043 - 30352002-30352005,30352088-30352522,30353934-303543... 29 1.7
04_04_0639 + 26883810-26883821,26884131-26884307,26885276-268853... 29 2.3
11_06_0498 - 24344454-24344660,24344840-24344944,24345324-243454... 29 3.0
03_05_0565 + 25667391-25667696 29 3.0
07_01_0769 + 5908942-5908946,5909085-5909666,5910370-5910429,591... 28 4.0
06_01_0175 - 1371089-1371706,1371812-1371994,1372069-1372324,137... 28 5.2
03_05_0105 - 20861130-20861384,20861472-20862262,20862364-208626... 28 5.2
02_05_0426 - 28881671-28881753,28882130-28882621,28882802-288828... 28 5.2
12_02_0871 + 23865343-23866016,23866122-23866170,23866276-238663... 27 6.9
12_01_0178 + 1316730-1316949,1317781-1318655 27 6.9
07_03_0755 - 21261855-21261945,21262277-21262323,21262819-212630... 27 6.9
04_04_1224 + 31858110-31858338,31859180-31859301,31859398-318595... 27 6.9
02_04_0042 + 19182251-19182562,19182626-19182853 27 6.9
06_03_0428 + 20692616-20692629,20692895-20693717 27 9.1
03_05_0366 - 23505755-23506441 27 9.1
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598... 27 9.1
01_05_0006 + 17008799-17009417,17010035-17010162,17010425-170106... 27 9.1
01_01_0256 - 2083973-2084816,2084922-2086093 27 9.1
>07_03_1147 +
24349811-24350161,24351031-24351366,24353260-24353376,
24353585-24353647,24354066-24354139,24354216-24354306,
24354791-24354850,24355270-24355462,24356242-24356522,
24357435-24357536,24357664-24357774,24358410-24358475,
24358562-24358660,24358757-24358788,24359171-24359274,
24359380-24359507,24359625-24359756,24360051-24360359,
24360887-24361071,24361161-24361263,24361407-24361552,
24361748-24361827,24361901-24362103
Length = 1121
Score = 32.3 bits (70), Expect = 0.24
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = -2
Query: 460 EDAVHGAPHRVPAPVLEQQVPQVQSS--QALVLVEQLDRRHLVHLPPRTGSAEEALCLAG 287
+D++H P+P +++ SS QA V+ + V + TG +C+ G
Sbjct: 737 DDSLHTVMQNCPSPTAHEEIAFDSSSISQASVICPSMSSAKSVKVSQHTGRIHLYICVPG 796
Query: 286 HDVR 275
HD R
Sbjct: 797 HDSR 800
>11_02_0101 - 8306468-8307099,8307227-8307404,8307990-8308259
Length = 359
Score = 30.3 bits (65), Expect = 0.98
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Frame = +2
Query: 32 LAKTVENVTVFGVCSKSKHEALKTNNNNID--HLLERGSDYTSEVRKVTPDGVDIVLDCL 205
LAK V S K LKT D + + +D T +R+ PDG+DI D +
Sbjct: 188 LAKIAGCYVVGSAGSDEKVTLLKTKFGFHDAFNYKKESNDLTGALRRCFPDGIDIYFDNV 247
Query: 206 CGEECNRGYSLLKPMGRYILYG 271
G + ++ GR ++ G
Sbjct: 248 GGATLDAALVNMRRGGRVVVCG 269
>12_02_1058 -
25735902-25736000,25736085-25736152,25736575-25736638,
25736838-25736919,25737503-25737561,25737664-25737723,
25737884-25738046,25738236-25738360,25738827-25738859,
25739098-25739160,25739364-25739423,25739972-25740196,
25740272-25740433
Length = 420
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 263 LYGSSNIVTGETKSFFSAARAWW 331
+Y IV + K FSAAR WW
Sbjct: 201 IYNKDGIVVYDGKGLFSAARVWW 223
>10_07_0124 -
13085820-13085997,13086235-13086362,13086475-13086550,
13086726-13086803,13086985-13087064,13087411-13087480,
13087730-13087887,13088225-13088315,13088379-13088455,
13088612-13088686,13088798-13089071,13089911-13090041,
13090154-13090323,13090413-13090971,13091077-13091127
Length = 731
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 179 GVDIVLDCLCGEECNRGYSL 238
G+D + DC CG+E RG SL
Sbjct: 134 GIDPIFDCSCGQEVLRGISL 153
>10_01_0088 + 1087807-1088282,1088752-1088974
Length = 232
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/65 (33%), Positives = 26/65 (40%)
Frame = +1
Query: 4 RRCGTSCSPVGEDGRKRHRVWCLLQKQARGAEDKQQ*HRPPAREGQRLHQRSQEGNSGWR 183
RR G + G DGR+R VW + K A E A R G GWR
Sbjct: 46 RRKGAGLAAAGGDGRRRGGVWAAVVK-AAATEPATSGITGSASAIAGSGARYGRG-GGWR 103
Query: 184 RHCAG 198
R C+G
Sbjct: 104 RGCSG 108
>06_03_0679 -
23464009-23464381,23464804-23464886,23466537-23466703,
23466821-23467007,23467093-23467311
Length = 342
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 143 DYTSEVRKVTPDGVDIVLDCLCGEECNRGYSLLKPMGRYILYG 271
D S +++ PDG+DI D + GE + + GR L G
Sbjct: 212 DMKSALKRYFPDGIDIYFDNVGGETLEAALANMNTYGRVALCG 254
>04_04_1043 -
30352002-30352005,30352088-30352522,30353934-30354351,
30355173-30355419
Length = 367
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -1
Query: 143 RCPSRAGGRCYCCLSSAPRACFWSRHQTR*RFRPSSPTGLQLV-PH 9
RC G + C +AP + + RH R R R P QLV PH
Sbjct: 99 RCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVAPH 144
>04_04_0639 +
26883810-26883821,26884131-26884307,26885276-26885339,
26886614-26887734,26888193-26888481,26888528-26888658,
26888910-26889133,26889220-26889286,26889744-26889803,
26889896-26889979,26890290-26890301
Length = 746
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -3
Query: 468 HRV-KTLCTARRTVSPRPCWNSRCRRFSPARL 376
HR + L A RTV+ RP W C R ARL
Sbjct: 213 HRYPEALADAERTVALRPDWAKGCSRLGAARL 244
>11_06_0498 -
24344454-24344660,24344840-24344944,24345324-24345407,
24345523-24345615,24345795-24345920,24347157-24347315,
24347398-24347475,24348316-24348375,24349433-24349555,
24349961-24350041
Length = 371
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -3
Query: 426 PRPCWNS---RCRRFSPARLLFSSNSLIGDTLSTCHHARAALKKLFVSPVTMLDD 271
PRP W + RF+PA+LL + + L + K FVS VT++ D
Sbjct: 124 PRPFWLALFVEGTRFTPAKLLAAQEYAVSQGLPAPRNVLIPRTKGFVSAVTIMRD 178
>03_05_0565 + 25667391-25667696
Length = 101
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 166 GNSGWRRHCAGLPLRRGVQPRVFASEANGP 255
G SGWR P R + PR+F ++A P
Sbjct: 20 GGSGWRGDGGRRPRRHDLAPRIFMADAAHP 49
>07_01_0769 +
5908942-5908946,5909085-5909666,5910370-5910429,
5910635-5910674,5910767-5910860,5911582-5911952
Length = 383
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +1
Query: 37 EDGRKRHRVWCLLQKQARGAEDKQQ*H---RPPAREGQRLHQRSQEGN 171
E G KR RV Q+ + +++ H R R+ +R HQR QEG+
Sbjct: 64 ERGEKRRRVGHGQQRSHQRDQERSHQHDQERSVERDQERSHQRDQEGS 111
>06_01_0175 -
1371089-1371706,1371812-1371994,1372069-1372324,
1372407-1372976,1373423-1373529,1373664-1374136,
1374279-1374372
Length = 766
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = -2
Query: 394 VQSSQALVLVEQLDRRHLVHLPPRTGSAEEALCLAGHDVR*SIEDVTAHWLQKRIPAV 221
+ QAL +E H + +PPRT + + G + + TA WL + IP +
Sbjct: 532 ISMKQALAFLEDFKLGHYMKIPPRTMFMAQ---VVGTSIAAFVYIGTAWWLMETIPNI 586
>03_05_0105 -
20861130-20861384,20861472-20862262,20862364-20862618,
20862713-20862827,20862959-20863011,20863113-20863373,
20863699-20863749,20863863-20864114,20864504-20864726,
20865317-20865460
Length = 799
Score = 27.9 bits (59), Expect = 5.2
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +2
Query: 89 EALKTNNNNIDHLLERGSDYTSEVRKVTPDGVDIVLDCLCGEECNRGYSLLKPMGRYILY 268
++L+ + + LLE DY +V T + I CN +S KP GRY ++
Sbjct: 631 DSLEEAKDFVVTLLENLQDYIRDVNLYTDEPHTISAH----SSCNHSFSREKPSGRYAVH 686
Query: 269 GSSNIVTGETKSFFSA 316
+ E+ S +A
Sbjct: 687 AEDMLTPIESFSEITA 702
>02_05_0426 -
28881671-28881753,28882130-28882621,28882802-28882864,
28883251-28883440,28883534-28883642,28883952-28884363,
28884967-28885196,28885294-28885403
Length = 562
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -1
Query: 143 RCPSRAGGRCYCCLSSAPRACFWSRHQTR*RFRPSSPTGLQLV 15
RC G + C +AP + + RH R R R P QLV
Sbjct: 130 RCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVETQLV 172
>12_02_0871 +
23865343-23866016,23866122-23866170,23866276-23866356,
23866599-23866718,23866957-23867055,23867135-23867194,
23867316-23867410,23867483-23867508,23869212-23869285,
23870194-23870259,23871027-23871099,23871585-23871622,
23873758-23873871,23876079-23876195,23876288-23876368,
23876468-23876536,23876631-23876669,23876809-23876973,
23877380-23877484,23877569-23877637,23877754-23877816,
23877903-23878021,23878124-23878348,23878409-23878610
Length = 940
Score = 27.5 bits (58), Expect = 6.9
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = -1
Query: 194 AQCLRHPELPS*LRWCSRCPSRAGGRCYCCLSS--APRACFWSRHQTR*RFRP--SSP 33
+QC+R P+ + +R P RA ++ APRA W R + R R R SSP
Sbjct: 45 SQCVRRFGKPAAKKGSARTPRRATPVAAAAAAAYDAPRAPLWDRSEERERIRARLSSP 102
>12_01_0178 + 1316730-1316949,1317781-1318655
Length = 364
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 226 RVFASEANGPLHPLWII*HRDRRDKELLQRCPCVVASGQG 345
RV A N PL ++ HRD D ++ + CP V QG
Sbjct: 284 RVVAVVENTPLFLIFRAVHRDGSDYDIPKYCPLVFKVDQG 323
>07_03_0755 -
21261855-21261945,21262277-21262323,21262819-21263014,
21263239-21263340,21263602-21263678,21264037-21264236,
21264324-21264681,21265245-21265301,21265434-21266192,
21266287-21266468,21266651-21266813
Length = 743
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +1
Query: 52 RHRVWC--LLQKQARGAEDKQQ*HRPPAREGQRLH 150
R +VWC L + Q RGA R P GQ+LH
Sbjct: 119 RIKVWCVPLAESQFRGAILANYYQRMPGAPGQKLH 153
>04_04_1224 +
31858110-31858338,31859180-31859301,31859398-31859507,
31859661-31859725,31859940-31860004,31860387-31860632,
31861212-31861313,31861484-31861534,31862015-31862105,
31862777-31862841
Length = 381
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = -2
Query: 475 LRPQSEDAVHGAP-----HRVPAPVLEQQVPQVQSSQALVLVEQLDRRHLV 338
+ P S+D +HGAP +PAP+ Q +Q Q L+ ++ ++ H++
Sbjct: 325 VHPFSQDVMHGAPVMPQGWSLPAPLKSHQA-SLQKFQGLMYIDLVNCSHIM 374
>02_04_0042 + 19182251-19182562,19182626-19182853
Length = 179
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 173 PDGVDIV-LDCLCGEECNRGYSLLKPMGRYILYGSSNIV 286
P GVD V LC C G SL+ +G + GSS ++
Sbjct: 61 PCGVDAVPAGTLCAVICGGGCSLVAAVGEVVPMGSSGVL 99
>06_03_0428 + 20692616-20692629,20692895-20693717
Length = 278
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 7/51 (13%)
Frame = -2
Query: 457 DAVHGAPHRVPAPVLEQQVPQVQSSQALVLVEQLDR-------RHLVHLPP 326
DAV AP P P++ Q ++++A LV Q+D+ +V LPP
Sbjct: 152 DAVVPAPPSPPPPLMPPQASPSEAARAHALVAQVDQDDDDEELEEIVELPP 202
>03_05_0366 - 23505755-23506441
Length = 228
Score = 27.1 bits (57), Expect = 9.1
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +1
Query: 148 HQRSQEGNSGWRRH 189
H+R ++G SGW RH
Sbjct: 88 HRRQRQGGSGWERH 101
>02_05_0640 -
30558523-30559027,30559123-30559252,30559388-30559868,
30560292-30560346,30560537-30560613,30561228-30561315,
30561490-30561593,30562050-30562231,30562347-30563109,
30563195-30563438,30564513-30564658,30565158-30565283,
30565404-30565517,30565595-30565762,30566283-30566528,
30566605-30566767,30566970-30567064,30567274-30567357,
30567769-30568055,30568359-30568572,30568923-30569140,
30569386-30569623,30570312-30571118,30571202-30571301,
30571694-30571737,30571824-30571973
Length = 1942
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = -2
Query: 400 PQVQSSQALVLVEQLDRRHLVHLPPRTGSAEEALCLAGHDVR*SIED---VTAHWLQKRI 230
P + +S L Q+ H H P R+ A+ G + + +ED T++ LQKR+
Sbjct: 13 PAISASAVLPQQRQMQLHHHHHHPARSSIADLFTLYLGMNSKQRVEDPTRETSNKLQKRV 72
Query: 229 PAV 221
A+
Sbjct: 73 TAM 75
>01_05_0006 +
17008799-17009417,17010035-17010162,17010425-17010650,
17010792-17010925,17010988-17011161,17011234-17012238
Length = 761
Score = 27.1 bits (57), Expect = 9.1
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = -2
Query: 439 PHRVPAPVLEQQVPQVQS-SQALVLVEQLDRRHLVHLPPRTGSAEEALCLAGHD--VR*S 269
P + P P L P+ Q+ S+ VL E L + + L T + L + G D
Sbjct: 157 PVQSPGPFLAGTEPRYQAASREEVLGEPLTKEEVDELVKATLKTKRQLNI-GRDGLTHNM 215
Query: 268 IEDVTAHWLQKRI 230
+E++ +HW +KR+
Sbjct: 216 LENIHSHWKRKRV 228
>01_01_0256 - 2083973-2084816,2084922-2086093
Length = 671
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 448 HGAPHRVPAPVLEQQVPQVQSSQA 377
H P + P P + Q VPQ Q S A
Sbjct: 497 HPVPQQAPQPPMPQPVPQPQQSHA 520
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,739,388
Number of Sequences: 37544
Number of extensions: 377804
Number of successful extensions: 1519
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1518
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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