Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS330G04f
         (394 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    23   0.95 
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    23   0.95 
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    23   0.95 
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    23   0.95 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   2.2  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    22   2.2  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   2.9  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   2.9  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    21   5.1  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   5.1  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    21   5.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   5.1  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    20   8.8  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              20   8.8  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    20   8.8  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    20   8.8  

>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 23.4 bits (48), Expect = 0.95
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 3   NNKYNVDCKQYYSTNKYL 56
           NN YN +CK+ Y    Y+
Sbjct: 102 NNNYNNNCKKLYYNINYI 119


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.4 bits (48), Expect = 0.95
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 3   NNKYNVDCKQYYSTNKYL 56
           NN YN +CK+ Y    Y+
Sbjct: 102 NNNYNNNCKKLYYNINYI 119


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.4 bits (48), Expect = 0.95
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 3   NNKYNVDCKQYYSTNKYL 56
           NN YN +CK+ Y    Y+
Sbjct: 102 NNNYNNNCKKLYYNINYI 119


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.4 bits (48), Expect = 0.95
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 3   NNKYNVDCKQYYSTNKYL 56
           NN YN +CK+ Y    Y+
Sbjct: 102 NNNYNNNCKKLYYNINYI 119


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 184 VLLTLVS*EHNNKTTNVSSNCLFNV 110
           +L+T V+  +NN      + CL N+
Sbjct: 467 ILMTTVNEGNNNMAATYMNECLLNI 491


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 192 KSPFVSSCKLHIVLCNYRNSHASSATKQYYKNKQ 293
           K P  + CK      N   +H S   +Q+ KN+Q
Sbjct: 31  KEPICNICKRVYSSLNSLRNHKSIYHRQHSKNEQ 64


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 12  YNVDCKQYYSTNKY 53
           Y  DC Q YST  +
Sbjct: 218 YTADCTQVYSTGNF 231


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 3   NNKYNVDCKQYY 38
           NN YN +CK+ Y
Sbjct: 344 NNNYNNNCKKLY 355


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +3

Query: 3   NNKYNVDCKQYYSTNKY 53
           +N Y  DC   YST  +
Sbjct: 184 SNNYTTDCTIEYSTGNF 200


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 3   NNKYNVDCKQYYSTNKY 53
           N KYN + K  Y+ N Y
Sbjct: 95  NYKYNYNNKYNYNNNNY 111


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 168 FRKSIIIRLQMSPATAFSMCNCYEI 94
           FR+SI  ++Q  P T    C+   I
Sbjct: 42  FRRSIQQKIQYRPCTKNQQCSILRI 66


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 168 FRKSIIIRLQMSPATAFSMCNCYEI 94
           FR+SI  ++Q  P T    C+   I
Sbjct: 91  FRRSIQQKIQYRPCTKNQQCSILRI 115


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 151 NKTTNVSSNCLF 116
           N  TN+S +CL+
Sbjct: 117 NPNTNISEDCLY 128


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = -2

Query: 141 QMSPATAFSMCNCYEICLRNY 79
           ++SP +  ++C C   C R +
Sbjct: 94  ELSPNSTIAVCVCMRKCPRRH 114


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 151 NKTTNVSSNCLF 116
           N  TN+S +CL+
Sbjct: 117 NPNTNISEDCLY 128


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -2

Query: 54  DIYWCCSIVYN 22
           D YW C I YN
Sbjct: 528 DDYWNCVIQYN 538


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,268
Number of Sequences: 438
Number of extensions: 2279
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9638226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)