Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS330F09f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR450300-1|CAG29296.1| 374|Homo sapiens GA17 protein. 120 3e-27
BC051292-1|AAH51292.1| 374|Homo sapiens eukaryotic translation ... 120 3e-27
BC019103-1|AAH19103.1| 374|Homo sapiens PCI domain containing 1... 120 3e-27
AY769947-1|AAX12524.1| 374|Homo sapiens fetal lung protein B5 p... 120 3e-27
AK222564-1|BAD96284.1| 374|Homo sapiens dendritic cell protein ... 120 3e-27
AF064603-1|AAC17108.1| 374|Homo sapiens GA17 protein protein. 120 4e-27
DQ185042-1|ABD14422.1| 136|Homo sapiens dendritic cell protein ... 108 1e-23
AE006465-2|AAK61256.1| 1184|Homo sapiens some homology with holl... 29 9.9
>CR450300-1|CAG29296.1| 374|Homo sapiens GA17 protein.
Length = 374
Score = 120 bits (289), Expect = 3e-27
Identities = 63/151 (41%), Positives = 99/151 (65%)
Frame = +1
Query: 61 MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 240
M PA F+DIS EDQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE +
Sbjct: 1 MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDK 58
Query: 241 DIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSP 420
D+E+++NS+VS+++ + ++ E LI + ++L K + + LQ L L++ ++ N+P
Sbjct: 59 DVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTP 118
Query: 421 LRYHVYYHVIELAARVGFVREVFTGVEQLRK 513
+RY VY +I++AA G ++ + T ++Q+RK
Sbjct: 119 VRYTVYCSLIKVAASCGAIQYIPTELDQVRK 149
>BC051292-1|AAH51292.1| 374|Homo sapiens eukaryotic translation
initiation factor 3, subunit M protein.
Length = 374
Score = 120 bits (289), Expect = 3e-27
Identities = 63/151 (41%), Positives = 99/151 (65%)
Frame = +1
Query: 61 MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 240
M PA F+DIS EDQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE +
Sbjct: 1 MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDK 58
Query: 241 DIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSP 420
D+E+++NS+VS+++ + ++ E LI + ++L K + + LQ L L++ ++ N+P
Sbjct: 59 DVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTP 118
Query: 421 LRYHVYYHVIELAARVGFVREVFTGVEQLRK 513
+RY VY +I++AA G ++ + T ++Q+RK
Sbjct: 119 VRYTVYCSLIKVAASCGAIQYIPTELDQVRK 149
>BC019103-1|AAH19103.1| 374|Homo sapiens PCI domain containing 1
(herpesvirus entry mediator) protein.
Length = 374
Score = 120 bits (289), Expect = 3e-27
Identities = 63/151 (41%), Positives = 99/151 (65%)
Frame = +1
Query: 61 MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 240
M PA F+DIS EDQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE +
Sbjct: 1 MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDK 58
Query: 241 DIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSP 420
D+E+++NS+VS+++ + ++ E LI + ++L K + + LQ L L++ ++ N+P
Sbjct: 59 DVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTP 118
Query: 421 LRYHVYYHVIELAARVGFVREVFTGVEQLRK 513
+RY VY +I++AA G ++ + T ++Q+RK
Sbjct: 119 VRYTVYCSLIKVAASCGAIQYIPTELDQVRK 149
>AY769947-1|AAX12524.1| 374|Homo sapiens fetal lung protein B5
protein.
Length = 374
Score = 120 bits (289), Expect = 3e-27
Identities = 63/151 (41%), Positives = 99/151 (65%)
Frame = +1
Query: 61 MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 240
M PA F+DIS EDQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE +
Sbjct: 1 MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDK 58
Query: 241 DIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSP 420
D+E+++NS+VS+++ + ++ E LI + ++L K + + LQ L L++ ++ N+P
Sbjct: 59 DVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTP 118
Query: 421 LRYHVYYHVIELAARVGFVREVFTGVEQLRK 513
+RY VY +I++AA G ++ + T ++Q+RK
Sbjct: 119 VRYTVYCSLIKVAASCGAIQYIPTELDQVRK 149
>AK222564-1|BAD96284.1| 374|Homo sapiens dendritic cell protein
variant protein.
Length = 374
Score = 120 bits (289), Expect = 3e-27
Identities = 63/151 (41%), Positives = 99/151 (65%)
Frame = +1
Query: 61 MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 240
M PA F+DIS EDQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE +
Sbjct: 1 MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDK 58
Query: 241 DIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSP 420
D+E+++NS+VS+++ + ++ E LI + ++L K + + LQ L L++ ++ N+P
Sbjct: 59 DVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTP 118
Query: 421 LRYHVYYHVIELAARVGFVREVFTGVEQLRK 513
+RY VY +I++AA G ++ + T ++Q+RK
Sbjct: 119 VRYTVYCSLIKVAASCGAIQYIPTELDQVRK 149
>AF064603-1|AAC17108.1| 374|Homo sapiens GA17 protein protein.
Length = 374
Score = 120 bits (288), Expect = 4e-27
Identities = 63/151 (41%), Positives = 98/151 (64%)
Frame = +1
Query: 61 MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 240
M PA F+DIS EDQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE +
Sbjct: 1 MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDK 58
Query: 241 DIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSP 420
D+E+++NS+VS+++ + ++ E LI + ++L K + + LQ L L++ ++ N+P
Sbjct: 59 DVESVVNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTP 118
Query: 421 LRYHVYYHVIELAARVGFVREVFTGVEQLRK 513
+RY VY +IE+ A G ++ + T ++Q+RK
Sbjct: 119 VRYTVYCSLIEVVASCGAIQYIPTELDQVRK 149
>DQ185042-1|ABD14422.1| 136|Homo sapiens dendritic cell protein
GA17 protein.
Length = 136
Score = 108 bits (259), Expect = 1e-23
Identities = 55/134 (41%), Positives = 87/134 (64%)
Frame = +1
Query: 79 FMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSESDIEAIL 258
F+DIS EDQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE + D+E+++
Sbjct: 3 FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDKDVESVM 61
Query: 259 NSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSPLRYHVY 438
NS+VS+++ + ++ E LI + ++L K + + LQ L L++ ++ N+P+R VY
Sbjct: 62 NSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRCTVY 121
Query: 439 YHVIELAARVGFVR 480
+I++AA G ++
Sbjct: 122 CSLIKVAASCGAIQ 135
>AE006465-2|AAK61256.1| 1184|Homo sapiens some homology with
holliday junction DNA helicase RUVB like protein.
Length = 1184
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 366 GSFAIVMETLQQPRTQLTSKIPCILSCHRT 455
G F++ E Q PR Q +S+ +L+CH T
Sbjct: 775 GLFSVWQEVFQLPRAQRSSQHVSVLTCHGT 804
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,288,591
Number of Sequences: 237096
Number of extensions: 1272253
Number of successful extensions: 2918
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2911
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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