Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS330E03f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0514 - 4270936-4272084                                           35   0.046
04_04_0216 - 23691007-23691187,23691273-23691381,23691627-236917...    30   0.98 
04_04_0221 - 23710739-23710964,23711050-23711158,23711371-237114...    28   4.0  
09_01_0113 + 1751204-1751507,1751791-1752039,1753136-1753398,175...    28   5.2  
04_04_0219 - 23703579-23703747,23703836-23703944,23704170-237042...    27   9.1  
01_05_0712 - 24531654-24531874,24532438-24532538,24532621-245327...    27   9.1  
01_01_0754 - 5823076-5823089,5823797-5823911,5823992-5824045,582...    27   9.1  

>05_01_0514 - 4270936-4272084
          Length = 382

 Score = 34.7 bits (76), Expect = 0.046
 Identities = 19/88 (21%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
 Frame = +3

Query: 159 GTREVCLFIFCCVLVHFMTHLYTKMSIDIQG-TFVSQKINKVR-------WIPED--YAE 308
           G  ++C   FC  ++H +++  + +S+D++G T+ + K+ K+        W+P     +E
Sbjct: 209 GISDICRSAFCNGMLHLVSYQRSIVSVDVEGRTWRTTKVPKMEGVEEVRDWLPGSICQSE 268

Query: 309 TKCFLTGSWDDEVNLITVWTFESVNEDE 392
            K +    ++     +++W  E  ++DE
Sbjct: 269 GKLYYLSQYNTVPISLSIWLLEDYSKDE 296


>04_04_0216 -
           23691007-23691187,23691273-23691381,23691627-23691729,
           23691829-23691860,23692012-23692229,23692299-23692420
          Length = 254

 Score = 30.3 bits (65), Expect = 0.98
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +3

Query: 285 WIPEDYAETKCFLTGSWDDEVNLITVWTFESVNEDEEVEY 404
           +I E+Y     F+T +  DEVN  T+   E++N++  +EY
Sbjct: 143 YIKENYGNPTIFITENGVDEVNNKTMPLKEALNDNTRIEY 182


>04_04_0221 -
           23710739-23710964,23711050-23711158,23711371-23711473,
           23711568-23711599,23711707-23711924,23711994-23712109,
           23714696-23714843,23715713-23715800,23715935-23716019
          Length = 374

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +3

Query: 285 WIPEDYAETKCFLTGSWDDEVNLITVWTFESVNEDEEVEY 404
           ++ E+Y     ++T +  DEVN  T+   E++ +D  +EY
Sbjct: 248 YVKENYGNPTIYITENGVDEVNNKTMPLEEALKDDTRIEY 287


>09_01_0113 +
           1751204-1751507,1751791-1752039,1753136-1753398,
           1755192-1755357,1755445-1755534,1756376-1756674,
           1757022-1757231
          Length = 526

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +3

Query: 354 ITV-WTFESVNEDEEVEYPRALTKYPVDDDVTQ 449
           IT+ WTF+  NE    E    L + PVDD+V +
Sbjct: 453 ITIRWTFKKFNEGNRREILDPLLEDPVDDEVLE 485


>04_04_0219 -
           23703579-23703747,23703836-23703944,23704170-23704272,
           23704365-23704396,23704855-23705072,23706295-23706618,
           23706982-23707069,23707179-23707263
          Length = 375

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +3

Query: 288 IPEDYAETKCFLTGSWDDEVNLITVWTFESVNEDEEVEY 404
           I E+Y     ++T +  DE+N  T+   E++ +D  +EY
Sbjct: 269 IKENYGNPTIYITENGVDEINNKTMRLKEALKDDIRIEY 307


>01_05_0712 -
           24531654-24531874,24532438-24532538,24532621-24532716,
           24532951-24533048,24533827-24533883,24534764-24534895,
           24535042-24535155,24535227-24535359,24535448-24535678,
           24535761-24535843,24536009-24536137,24536504-24536599,
           24536719-24536773,24537316-24537386,24537472-24537525,
           24537691-24537768,24537985-24538117,24539381-24539496,
           24539580-24539651,24540113-24540218,24540657-24540772,
           24541170-24541319,24541410-24541492,24541591-24541669,
           24542645-24542695
          Length = 884

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = -1

Query: 323 EKTFCFSIIFRNPSDFIYFLRNKRSLNIY 237
           EKT+  S++F NP ++ YF+  ++ L +Y
Sbjct: 243 EKTYR-SLLFMNPDNYKYFIAVQKCLGLY 270


>01_01_0754 -
           5823076-5823089,5823797-5823911,5823992-5824045,
           5825629-5827251
          Length = 601

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 203 SFYDPFVYKNVNRYSRNVCF 262
           +FY  F YKN N YS+N  F
Sbjct: 438 TFYQRFSYKNSNLYSKNGTF 457


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,821,513
Number of Sequences: 37544
Number of extensions: 183766
Number of successful extensions: 352
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 352
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)