Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS330E03f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2506|AAF55542.1|  358|Drosophila melanogaster CG7671-PA...    79   5e-15
M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein...    29   2.9  
AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA...    29   2.9  
AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB...    29   2.9  

>AE014297-2506|AAF55542.1|  358|Drosophila melanogaster CG7671-PA
           protein.
          Length = 358

 Score = 78.6 bits (185), Expect = 5e-15
 Identities = 35/102 (34%), Positives = 67/102 (65%), Gaps = 6/102 (5%)
 Frame = +3

Query: 231 MSI-DIQGTFVSQKINKVRWIPEDYAETKCFLTGSWDDEVNLITVWTFES----VNEDEE 395
           MSI ++   ++S+K+++VRW+PE+  +++ F+TGSWD + N + +W  +S       D E
Sbjct: 1   MSIANVSTHYISEKVSQVRWLPEELQQSERFVTGSWDMDQNFVRLWRLQSNQYVTATDSE 60

Query: 396 V-EYPRALTKYPVDDDVTQIKFTEKNKIAVSISNGDVKILEI 518
           V + PR + K  ++DDVT ++F +K+ +AVS ++G + +  +
Sbjct: 61  VDQIPRCMDKVRMEDDVTAMEFVDKDTLAVSCADGHLSVFNV 102


>M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein
            protein.
          Length = 2146

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 17/71 (23%), Positives = 34/71 (47%)
 Frame = +3

Query: 198  LVHFMTHLYTKMSIDIQGTFVSQKINKVRWIPEDYAETKCFLTGSWDDEVNLITVWTFES 377
            L++   +L++ +    +G F+  K+N   W     A     L  S +DE  +  V ++E+
Sbjct: 1075 LINGRLNLHSSLLNKWEGVFIGSKLNDSNWHKVFVAINTSHLVLSANDEQAIFPVGSYET 1134

Query: 378  VNEDEEVEYPR 410
             N + +  +PR
Sbjct: 1135 AN-NSQPSFPR 1144


>AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA,
            isoform A protein.
          Length = 2146

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 17/71 (23%), Positives = 34/71 (47%)
 Frame = +3

Query: 198  LVHFMTHLYTKMSIDIQGTFVSQKINKVRWIPEDYAETKCFLTGSWDDEVNLITVWTFES 377
            L++   +L++ +    +G F+  K+N   W     A     L  S +DE  +  V ++E+
Sbjct: 1075 LINGRLNLHSSLLNKWEGVFIGSKLNDSNWHKVFVAINTSHLVLSANDEQAIFPVGSYET 1134

Query: 378  VNEDEEVEYPR 410
             N + +  +PR
Sbjct: 1135 AN-NSQPSFPR 1144


>AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB,
            isoform B protein.
          Length = 2189

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 17/71 (23%), Positives = 34/71 (47%)
 Frame = +3

Query: 198  LVHFMTHLYTKMSIDIQGTFVSQKINKVRWIPEDYAETKCFLTGSWDDEVNLITVWTFES 377
            L++   +L++ +    +G F+  K+N   W     A     L  S +DE  +  V ++E+
Sbjct: 1118 LINGRLNLHSSLLNKWEGVFIGSKLNDSNWHKVFVAINTSHLVLSANDEQAIFPVGSYET 1177

Query: 378  VNEDEEVEYPR 410
             N + +  +PR
Sbjct: 1178 AN-NSQPSFPR 1187


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,588,066
Number of Sequences: 53049
Number of extensions: 333648
Number of successful extensions: 638
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)