Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS330E02f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81592-13|CAB76412.2|  421|Caenorhabditis elegans Hypothetical p...    29   2.0  
Z78016-9|CAB76723.2|  421|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical p...    27   6.2  
Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U39472-7|AAP86620.2|  339|Caenorhabditis elegans Serpentine rece...    27   6.2  
AF125960-2|AAD14736.1|  478|Caenorhabditis elegans Hypothetical ...    27   8.1  
AC025726-9|AAK73924.1|  594|Caenorhabditis elegans Hypothetical ...    27   8.1  
AC025726-8|AAT81183.1|  537|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z81592-13|CAB76412.2|  421|Caenorhabditis elegans Hypothetical
           protein R186.6 protein.
          Length = 421

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +2

Query: 44  FVVLTVLSFFFIFLSYSNNFQ 106
           F++ T+LSFFF F+S SN FQ
Sbjct: 103 FILATILSFFF-FVSSSNTFQ 122


>Z78016-9|CAB76723.2|  421|Caenorhabditis elegans Hypothetical
           protein R186.6 protein.
          Length = 421

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +2

Query: 44  FVVLTVLSFFFIFLSYSNNFQ 106
           F++ T+LSFFF F+S SN FQ
Sbjct: 103 FILATILSFFF-FVSSSNTFQ 122


>Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical
            protein ZK1251.9 protein.
          Length = 1701

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 210  PPYRLYLQHLLATLNYVSNVT-YLSLN*LDRPL 305
            PP+ L+ QH    L+Y +NV   +SL  LD+ L
Sbjct: 1025 PPFSLFYQHKCPELSYQTNVVRNISLRTLDQEL 1057


>Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical protein
            ZK1251.9 protein.
          Length = 1701

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 210  PPYRLYLQHLLATLNYVSNVT-YLSLN*LDRPL 305
            PP+ L+ QH    L+Y +NV   +SL  LD+ L
Sbjct: 1025 PPFSLFYQHKCPELSYQTNVVRNISLRTLDQEL 1057


>U39472-7|AAP86620.2|  339|Caenorhabditis elegans Serpentine
           receptor, class a (alpha)protein 35 protein.
          Length = 339

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +1

Query: 277 CH*INW-IGHSKVLQVMSYVQTSILFIQCV*NIIPL 381
           C+ I W +G +K+L  MS++QT++   + +  IIPL
Sbjct: 98  CYAITWTVGAAKML--MSFIQTALTIERIIDRIIPL 131


>AF125960-2|AAD14736.1|  478|Caenorhabditis elegans Hypothetical
           protein T12B3.2 protein.
          Length = 478

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
 Frame = +2

Query: 20  INSMHFCAFVVLTVLSFFF---IFLSYSNN 100
           IN  H CAF+     +FF    IF  YSNN
Sbjct: 5   INRFHICAFITWQFANFFAGQNIFGIYSNN 34


>AC025726-9|AAK73924.1|  594|Caenorhabditis elegans Hypothetical
           protein Y71G12B.23a protein.
          Length = 594

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
 Frame = -1

Query: 509 LGTGPPLEVFFFFL-NYLFTNKNHVYFII--INT*TLS*IKTILHYNGIIF 366
           +G GP + VF++F+  Y   +  H+  II  I T  L    T+ H+  ++F
Sbjct: 388 IGIGPTILVFYYFMCAYAHRDLQHILMIIYGIFTTLLFTSSTVYHFCELLF 438


>AC025726-8|AAT81183.1|  537|Caenorhabditis elegans Hypothetical
           protein Y71G12B.23b protein.
          Length = 537

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
 Frame = -1

Query: 509 LGTGPPLEVFFFFL-NYLFTNKNHVYFII--INT*TLS*IKTILHYNGIIF 366
           +G GP + VF++F+  Y   +  H+  II  I T  L    T+ H+  ++F
Sbjct: 388 IGIGPTILVFYYFMCAYAHRDLQHILMIIYGIFTTLLFTSSTVYHFCELLF 438


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,512,916
Number of Sequences: 27780
Number of extensions: 219996
Number of successful extensions: 493
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 491
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)