Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS330D07f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92793-2|CAD56589.1| 684|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z92793-1|CAB07229.1| 681|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z72503-11|CAD56560.1| 684|Caenorhabditis elegans Hypothetical p... 31 0.50
Z72503-10|CAA96601.1| 681|Caenorhabditis elegans Hypothetical p... 31 0.50
Z74042-17|CAA98537.1| 688|Caenorhabditis elegans Hypothetical p... 31 0.66
AL031623-1|CAA20938.1| 688|Caenorhabditis elegans Hypothetical ... 31 0.66
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 30 0.87
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 30 0.87
AF003151-4|AAK18918.2| 142|Caenorhabditis elegans Hypothetical ... 30 1.2
AF003151-3|ABJ99067.1| 247|Caenorhabditis elegans Hypothetical ... 30 1.2
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 30 1.2
M93256-1|AAB59181.1| 1110|Caenorhabditis elegans tra-1 protein. 29 2.0
AL117202-5|CAB61040.2| 1109|Caenorhabditis elegans Hypothetical ... 29 2.0
Z82288-7|CAB05326.1| 390|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF016448-10|ABR92607.1| 849|Caenorhabditis elegans Smek (dictyo... 29 2.7
AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek (dictyos... 29 2.7
AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transport... 28 3.5
U39741-2|AAQ81278.1| 279|Caenorhabditis elegans Hypothetical pr... 28 4.7
U39741-1|AAA80429.2| 301|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 27 6.2
U39652-4|AAV28337.1| 1122|Caenorhabditis elegans Hypothetical pr... 27 6.2
U20861-6|AAA62294.1| 256|Caenorhabditis elegans Temporarily ass... 27 6.2
AF040647-2|AAB94995.3| 299|Caenorhabditis elegans Hypothetical ... 27 6.2
U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical pr... 27 8.1
AL132904-3|CAB60972.1| 718|Caenorhabditis elegans Hypothetical ... 27 8.1
AF038619-3|AAO91713.1| 126|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z92793-2|CAD56589.1| 684|Caenorhabditis elegans Hypothetical
protein C26C6.5b protein.
Length = 684
Score = 31.1 bits (67), Expect = 0.50
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +1
Query: 289 PAT--TIPAFSQIKSTSLTVVPQQASIAASTGPSQPTHRASWSYGTQLH 429
PAT TIP S +S+ +VP+ I +STG S PT S T +H
Sbjct: 525 PATSQTIPTSSTATVSSIPLVPRLPQIPSSTGSSTPTQAVKTS--TPIH 571
>Z92793-1|CAB07229.1| 681|Caenorhabditis elegans Hypothetical
protein C26C6.5a protein.
Length = 681
Score = 31.1 bits (67), Expect = 0.50
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +1
Query: 289 PAT--TIPAFSQIKSTSLTVVPQQASIAASTGPSQPTHRASWSYGTQLH 429
PAT TIP S +S+ +VP+ I +STG S PT S T +H
Sbjct: 522 PATSQTIPTSSTATVSSIPLVPRLPQIPSSTGSSTPTQAVKTS--TPIH 568
>Z72503-11|CAD56560.1| 684|Caenorhabditis elegans Hypothetical
protein C26C6.5b protein.
Length = 684
Score = 31.1 bits (67), Expect = 0.50
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +1
Query: 289 PAT--TIPAFSQIKSTSLTVVPQQASIAASTGPSQPTHRASWSYGTQLH 429
PAT TIP S +S+ +VP+ I +STG S PT S T +H
Sbjct: 525 PATSQTIPTSSTATVSSIPLVPRLPQIPSSTGSSTPTQAVKTS--TPIH 571
>Z72503-10|CAA96601.1| 681|Caenorhabditis elegans Hypothetical
protein C26C6.5a protein.
Length = 681
Score = 31.1 bits (67), Expect = 0.50
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +1
Query: 289 PAT--TIPAFSQIKSTSLTVVPQQASIAASTGPSQPTHRASWSYGTQLH 429
PAT TIP S +S+ +VP+ I +STG S PT S T +H
Sbjct: 522 PATSQTIPTSSTATVSSIPLVPRLPQIPSSTGSSTPTQAVKTS--TPIH 568
>Z74042-17|CAA98537.1| 688|Caenorhabditis elegans Hypothetical
protein T11F9.12 protein.
Length = 688
Score = 30.7 bits (66), Expect = 0.66
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +1
Query: 274 SASRTPATTIPAFSQIKSTSLTVVPQQASIAASTGPSQPTHRASWSYGTQLHCLITPQQF 453
SAS T +TT P + + T ++S ++T T +W+Y T+ + P +
Sbjct: 122 SASTTLSTTQPQTTTTTTIPSTTTMTESSSTSTTASPTTTRIRTWTYTTRYPSVHDPNRH 181
Query: 454 IAAHDRIINAWGH 492
DRI + H
Sbjct: 182 RYGQDRIHHQHHH 194
>AL031623-1|CAA20938.1| 688|Caenorhabditis elegans Hypothetical
protein T11F9.12 protein.
Length = 688
Score = 30.7 bits (66), Expect = 0.66
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +1
Query: 274 SASRTPATTIPAFSQIKSTSLTVVPQQASIAASTGPSQPTHRASWSYGTQLHCLITPQQF 453
SAS T +TT P + + T ++S ++T T +W+Y T+ + P +
Sbjct: 122 SASTTLSTTQPQTTTTTTIPSTTTMTESSSTSTTASPTTTRIRTWTYTTRYPSVHDPNRH 181
Query: 454 IAAHDRIINAWGH 492
DRI + H
Sbjct: 182 RYGQDRIHHQHHH 194
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 30.3 bits (65), Expect = 0.87
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +1
Query: 217 PATLVTPT*CEHATF*FIFSASRTPATTIPAFSQIKSTSLTVVPQQASIAAS---TGPSQ 387
P T T T +T I +++ +TT+P + + + T ++ AS T PS
Sbjct: 245 PTTPTTTTIASTSTVTSIVTSTTVTSTTVPTTTVVTTVPTTTATSTSTSTASTTTTTPST 304
Query: 388 PTHRASWSYGT 420
TH + +Y T
Sbjct: 305 STHTTTVTYST 315
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 30.3 bits (65), Expect = 0.87
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +1
Query: 217 PATLVTPT*CEHATF*FIFSASRTPATTIPAFSQIKSTSLTVVPQQASIAAS---TGPSQ 387
P T T T +T I +++ +TT+P + + + T ++ AS T PS
Sbjct: 227 PTTPTTTTIASTSTVTSIVTSTTVTSTTVPTTTVVTTVPTTTATSTSTSTASTTTTTPST 286
Query: 388 PTHRASWSYGT 420
TH + +Y T
Sbjct: 287 STHTTTVTYST 297
>AF003151-4|AAK18918.2| 142|Caenorhabditis elegans Hypothetical
protein D1007.13a protein.
Length = 142
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +1
Query: 346 PQQASIAASTGPSQPTHRASWSYGTQLHCLITPQQFIAAHDRIINAWGHTSPAWQLCT 519
P + +ST S P +S +YG+ + P F + ++WG T P L T
Sbjct: 15 PSSPASTSSTAYSPPPATSSTTYGSSIPSTYPPSTFAPSAYPTSSSWGSTHPPEDLPT 72
>AF003151-3|ABJ99067.1| 247|Caenorhabditis elegans Hypothetical
protein D1007.13b protein.
Length = 247
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +1
Query: 346 PQQASIAASTGPSQPTHRASWSYGTQLHCLITPQQFIAAHDRIINAWGHTSPAWQLCT 519
P + +ST S P +S +YG+ + P F + ++WG T P L T
Sbjct: 120 PSSPASTSSTAYSPPPATSSTTYGSSIPSTYPPSTFAPSAYPTSSSWGSTHPPEDLPT 177
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 29.9 bits (64), Expect = 1.2
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 350 SKPASQPQQDHRSRLTALPGPTARNFTASSRRNSSSQPT---TGSSTLGVTHLRRGSS 514
S AS Q S TA PG + T +S + SSS T TGS+T+ T + +GSS
Sbjct: 925 STSASSSTQPIASSTTANPGSSTSGPTIASTQGSSSTQTNSNTGSTTVATT-VTQGSS 981
Score = 28.3 bits (60), Expect = 3.5
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 299 QSPHSRR*KARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTA-SSRRNSSSQPTTGS 475
Q P S R A SS ++P + + ++ P PTA + + SS +SS T GS
Sbjct: 722 QPPASSRSTASQ-GSSSAQPIASSSTMGSTAGSSSPQPTASSTSVPSSTGATSSGSTVGS 780
Query: 476 STLGVTHLRRGSS 514
ST+G T SS
Sbjct: 781 STMGSTQSSLPSS 793
>M93256-1|AAB59181.1| 1110|Caenorhabditis elegans tra-1 protein.
Length = 1110
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 285 NSGYHNPRILADKKHVIDSRPTASQHRSLNR--TIAADSPRFLVLRHATSLPHHAATVH 455
+S +H+ + L ++ + D T+S RSL + TI+ D HATS P A VH
Sbjct: 950 SSSHHHTKTLLIQRALFDK--TSSVRRSLLQFITISVDQEELRQSCHATSAPQGAHVVH 1006
>AL117202-5|CAB61040.2| 1109|Caenorhabditis elegans Hypothetical
protein Y47D3A.6a protein.
Length = 1109
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 285 NSGYHNPRILADKKHVIDSRPTASQHRSLNR--TIAADSPRFLVLRHATSLPHHAATVH 455
+S +H+ + L ++ + D T+S RSL + TI+ D HATS P A VH
Sbjct: 949 SSSHHHTKTLLIQRALFDK--TSSVRRSLLQFITISVDQEELRQSCHATSAPQGAHVVH 1005
>Z82288-7|CAB05326.1| 390|Caenorhabditis elegans Hypothetical
protein ZK896.9 protein.
Length = 390
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 268 IFSASRTPATTIPAFSQIKSTSLTVVPQQASIAAS 372
+ S++ P TT+ FS + +T+LT V AS+A+S
Sbjct: 173 VLSSTLAPTTTVSPFSNL-TTTLTTVVTTASLASS 206
>AF016448-10|ABR92607.1| 849|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform b protein.
Length = 849
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 341 SSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRNSSSQPT 466
+S P+ P R ++ PGP+ + SS+ N S PT
Sbjct: 690 NSDRSPSRTPSPASSPRASSSPGPSRDDEVTSSQNNKESSPT 731
>AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform a protein.
Length = 1085
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 341 SSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRNSSSQPT 466
+S P+ P R ++ PGP+ + SS+ N S PT
Sbjct: 926 NSDRSPSRTPSPASSPRASSSPGPSRDDEVTSSQNNKESSPT 967
>AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transporter
family protein 4 protein.
Length = 1802
Score = 28.3 bits (60), Expect = 3.5
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
Frame = -1
Query: 386 CDGPVEAAMLACCGTT-----VNDVLFICENAGIVV 294
C P+ A+ ACCGT V++VLF+ GI+V
Sbjct: 1338 CTIPMFKAVTACCGTASERLYVDNVLFVGNRKGILV 1373
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +3
Query: 12 IVNSYIC*SFVLCLVNLLIICSVSCCHNI*LFPVLFRLIYRHRFACGRTPFG 167
I+ YI + V + +S H +FP LF+ + H+ CG T FG
Sbjct: 842 IIREYIPEAHVFSYIGQEATYLLSATHRP-IFPKLFKELEDHQTQCGITSFG 892
>U39741-2|AAQ81278.1| 279|Caenorhabditis elegans Hypothetical
protein F12D9.1b protein.
Length = 279
Score = 27.9 bits (59), Expect = 4.7
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 21 SYIC*SFVLCLVNLLIICSV 80
+YIC S +LC+ L+++C V
Sbjct: 211 TYICGSIILCIAVLMVVCVV 230
>U39741-1|AAA80429.2| 301|Caenorhabditis elegans Hypothetical
protein F12D9.1a protein.
Length = 301
Score = 27.9 bits (59), Expect = 4.7
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 21 SYIC*SFVLCLVNLLIICSV 80
+YIC S +LC+ L+++C V
Sbjct: 233 TYICGSIILCIAVLMVVCVV 252
>Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical protein
F54F12.1 protein.
Length = 1217
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 294 YHNPRILADKKHVIDSRPTASQHRSLNRT 380
Y++ +ILADK H + PTA + ++N T
Sbjct: 1148 YYHEQILADKYHDNNDGPTAERAANMNDT 1176
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 6.2
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 338 QSSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRNSSSQPTTGSSTLGVTHLRRGSS 514
+S+ + P+S + T+ GP++ + T SS SSS +T SST T ++ S+
Sbjct: 479 ESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTA-SSSVSSTASSTQSSTSTQQSST 536
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 6.2
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 338 QSSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRNSSSQPTTGSSTLGVTHLRRGSS 514
+S+ + P+S + T+ GP++ + T SS SSS +T SST T ++ S+
Sbjct: 479 ESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTA-SSSVSSTASSTQSSTSTQQSST 536
>U39652-4|AAV28337.1| 1122|Caenorhabditis elegans Hypothetical
protein R07E4.1a protein.
Length = 1122
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 393 SPRFLVLRHATSLPHHAATVHRSPRPDHQRL 485
SP +V+ H T +P+ TVHR+ P H L
Sbjct: 60 SPPSIVVAHLTKVPNAIGTVHRA-APTHSGL 89
>U20861-6|AAA62294.1| 256|Caenorhabditis elegans Temporarily
assigned gene nameprotein 327, isoform a protein.
Length = 256
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/50 (24%), Positives = 21/50 (42%)
Frame = -1
Query: 389 GCDGPVEAAMLACCGTTVNDVLFICENAGIVVAGVLDALKMNQKVACSHH 240
GC P+ + + GT + F+C++ G+ G + N C H
Sbjct: 139 GCSQPITSNFITALGTHWHPDCFVCQHCGVSFNGA-SFFEHNGAPLCERH 187
>AF040647-2|AAB94995.3| 299|Caenorhabditis elegans Hypothetical
protein F54D12.5 protein.
Length = 299
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 258 GCVFTSRRGHQCSGLYSGINPPTVDTSRNRTRTASGH 148
G + T R + SG+ +GI PP ++ S ++S H
Sbjct: 14 GNIVTERTNPKASGISNGILPPYINISPKEVPSSSRH 50
>U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical protein
C16A3.3 protein.
Length = 1743
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 264 SEGCVFTSRRGHQCSGLYSGINPPTVDTSRNRTRTA 157
S+G V TS + + G+YSG+ T + NR R +
Sbjct: 985 SDGAVSTSTKSVKNFGVYSGVVIGTANLEENRKRNS 1020
>AL132904-3|CAB60972.1| 718|Caenorhabditis elegans Hypothetical
protein Y111B2A.3 protein.
Length = 718
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +2
Query: 362 SQPQQDHRSRLTALPGPTARNFTASSRRNSSSQPTTGSSTLG 487
S+ DH +R A PG R F SR NSS+ GSST G
Sbjct: 678 SERNMDHWTR-PASPGN--RPFFGGSRMNSSTSRAHGSSTNG 716
>AF038619-3|AAO91713.1| 126|Caenorhabditis elegans Hypothetical
protein F56A11.7 protein.
Length = 126
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 331 SLTVVPQQASIAASTGPSQPTHRASWSYGTQLH 429
+LT V Q +++ G ++ HR WS GTQLH
Sbjct: 54 TLTCVLQDLYLSSCHG-NEYGHRDLWSVGTQLH 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,730,577
Number of Sequences: 27780
Number of extensions: 284122
Number of successful extensions: 1097
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1093
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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