Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS330D05f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 282 3e-77
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 281 3e-77
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 281 3e-77
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 134 6e-33
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 128 5e-31
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 81 1e-16
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 42 7e-05
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 34 0.011
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 33 0.020
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 31 0.14
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.18
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 30 0.24
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.32
SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr 1|||Ma... 28 0.73
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 28 0.97
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 28 0.97
SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|c... 27 1.7
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 2.2
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 25 5.2
SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces pomb... 25 5.2
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 25 6.8
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 25 6.8
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 25 6.8
SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 9.0
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 282 bits (691), Expect = 3e-77
Identities = 129/173 (74%), Positives = 149/173 (86%)
Frame = +1
Query: 1 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 180
IDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTGEFEAGISK+GQ
Sbjct: 73 IDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQ 132
Query: 181 TREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVP 360
TREHALLA+TLGVKQLIV VNKMD+T +S+ RFEEI KE S++IKK+G+NP V FVP
Sbjct: 133 TREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVP 190
Query: 361 ISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKP 519
+SG+ GDNM+EP+T MPW++GWQ E K G GK L+EA+D+I PPARPTDKP
Sbjct: 191 VSGFQGDNMIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDSIEPPARPTDKP 243
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 281 bits (690), Expect = 3e-77
Identities = 128/173 (73%), Positives = 149/173 (86%)
Frame = +1
Query: 1 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 180
IDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQ
Sbjct: 73 IDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQ 132
Query: 181 TREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVP 360
TREHALLA+TLGVKQLIV VNKMD+T +S+ RFEEI KE S++IKK+G+NP V FVP
Sbjct: 133 TREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVP 190
Query: 361 ISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKP 519
+SG+ GDNM+EP+T MPW++GWQ E K G GK L+EA+D+I PPARPTDKP
Sbjct: 191 VSGFQGDNMIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDSIEPPARPTDKP 243
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 281 bits (690), Expect = 3e-77
Identities = 128/173 (73%), Positives = 149/173 (86%)
Frame = +1
Query: 1 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 180
IDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQ
Sbjct: 73 IDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQ 132
Query: 181 TREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVP 360
TREHALLA+TLGVKQLIV VNKMD+T +S+ RFEEI KE S++IKK+G+NP V FVP
Sbjct: 133 TREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVP 190
Query: 361 ISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKP 519
+SG+ GDNM+EP+T MPW++GWQ E K G GK L+EA+D+I PPARPTDKP
Sbjct: 191 VSGFQGDNMIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDSIEPPARPTDKP 243
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 134 bits (325), Expect = 6e-33
Identities = 77/176 (43%), Positives = 102/176 (57%), Gaps = 3/176 (1%)
Frame = +1
Query: 1 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 180
+D+A FE+ K I DAPGHRDFI MI G S AD AVL+V + FE G +NGQ
Sbjct: 243 MDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQ 302
Query: 181 TREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY-IKKIGYNPAAVAFV 357
TREHA L LG+ +++V VNK+D +SE RF+EIK VS + IK +G+ + V FV
Sbjct: 303 TREHAYLLRALGISEIVVSVNKLDLMS--WSEDRFQEIKNIVSDFLIKMVGFKTSNVHFV 360
Query: 358 PISGWHGDNML--EPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKP 519
PIS G N++ + S W+K G L+ ALD ++PP +P KP
Sbjct: 361 PISAISGTNLIQKDSSDLYKWYK------------GPTLLSALDQLVPPEKPYRKP 404
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 128 bits (309), Expect = 5e-31
Identities = 59/145 (40%), Positives = 95/145 (65%), Gaps = 4/145 (2%)
Frame = +1
Query: 1 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 180
+++ FET +++DAPGH+ ++ NMI G SQAD VL+++A GEFEAG + GQ
Sbjct: 304 VEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQ 363
Query: 181 TREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI-GYNPAA-VAF 354
TREHA+LA T G+ L+V +NKMD +SE R++E ++S +++++ GYN V +
Sbjct: 364 TREHAVLARTQGINHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKTDVKY 423
Query: 355 VPISGWHGDNMLE--PSTKMPWFKG 423
+P+S + G N+ + S+ PW++G
Sbjct: 424 MPVSAYTGQNVKDRVDSSVCPWYQG 448
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 80.6 bits (190), Expect = 1e-16
Identities = 41/99 (41%), Positives = 62/99 (62%)
Frame = +1
Query: 19 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 198
++ET+ + +D PGH D+IKNMITG + D A+++V+A G+ QTREH L
Sbjct: 110 EYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMP-------QTREHLL 162
Query: 199 LAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 315
LA +GVKQ++V +NK+D EP E E+++ +S Y
Sbjct: 163 LARQVGVKQIVVYINKVDMVEPDMIELVEMEMRELLSEY 201
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 41.5 bits (93), Expect = 7e-05
Identities = 23/93 (24%), Positives = 42/93 (45%)
Frame = +1
Query: 40 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 219
+V+ +D PGH + M+ G + D A+L++A QT EH + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162
Query: 220 KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI 318
K +I+ NK+D +E ++ I K + +
Sbjct: 163 KHIIILQNKVDLIRESAAEEHYQSILKFIKGTV 195
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 34.3 bits (75), Expect = 0.011
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +1
Query: 22 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 192
FE S Y + IID PGH DF + D AVL++ A +G I+ + Q R +
Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 33.5 bits (73), Expect = 0.020
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 22 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 147
F+ ++T +D PGH F G + AD VL+VA G
Sbjct: 215 FDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 30.7 bits (66), Expect = 0.14
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 13 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 147
++ + Y + +ID PGH DF ++ + + +L+V A G
Sbjct: 116 IYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 30.3 bits (65), Expect = 0.18
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 37 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 147
Y + +ID+PGH DF + + + D A ++V A G
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 29.9 bits (64), Expect = 0.24
Identities = 26/84 (30%), Positives = 38/84 (45%)
Frame = +1
Query: 1 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 180
I+ A F + +ID PGH DF + + D AV I+ + AG+ Q
Sbjct: 81 INSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAII-----DGSAGV--EAQ 133
Query: 181 TREHALLAFTLGVKQLIVGVNKMD 252
T+ A G+ ++I VNKMD
Sbjct: 134 TKVVWKQATKRGIPKVIF-VNKMD 156
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.32
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 49 IIDAPGHRDFIKNMITGTSQADCAVLIV 132
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 835
Score = 28.3 bits (60), Expect = 0.73
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = -1
Query: 506 GRAGGRMASRASMRHFPSALPSLRSTCHPLNQGILVEGSNMLSPCH 369
G GG S+ P+ LPS + P L E +ML CH
Sbjct: 545 GAGGGHAPDIISLVQNPNILPSSTNPTRPFTTNTLDEELDMLMVCH 590
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 0.97
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 37 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 132
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 0.97
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 37 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 132
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 367
Score = 27.1 bits (57), Expect = 1.7
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +2
Query: 269 TVSPDLRKSRRKYPHTSRRLATTQLL---SLSCPFLDGTETTCWSLQPKCLGSRDGRWSV 439
+ +PD+ ++PHT +R +T + L LSC + +E + P G +D + +
Sbjct: 145 STNPDVLYMSSQHPHTQQRYSTLKRLMVRCLSCEYSTLSEASDSMSNPLFFGDQDNGYVI 204
Query: 440 RKA 448
++
Sbjct: 205 SQS 207
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 26.6 bits (56), Expect = 2.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 52 IDAPGHRDFIKNMITGTSQADCAVLIV 132
ID PGH DF+ + + +D VL+V
Sbjct: 214 IDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 1 IDIALWKFETSKYYV--TIIDAPGHRDFIKN 87
I+I + E +++ T+ID PG DFI N
Sbjct: 73 IEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 347
Score = 25.4 bits (53), Expect = 5.2
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +1
Query: 247 MDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWF 417
+D +P + F IKK+V Y+ ++ + P + G N LEP TK PW+
Sbjct: 107 LDLKKPLLPQILFGNIKKDV--YLDQV-HRPRHYRGSGSAPLFG-NFLEPLTKTPWY 159
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 25.0 bits (52), Expect = 6.8
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = +2
Query: 335 TQLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTENASLKLSMPSCHLPAPLT 514
T L L+ F T+T W++ PK L R R + A L N L + H P +
Sbjct: 360 TPLGELNWIFTAITDTIAWNVFPKHLFRRLFRQDLMVAALFRNFLLAERIMLVHSCHPQS 419
Query: 515 SP 520
SP
Sbjct: 420 SP 421
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 25.0 bits (52), Expect = 6.8
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +1
Query: 298 KEVS---SYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 423
KEVS SYI +P +G+ +N+++P + P FKG
Sbjct: 159 KEVSTSKSYISSGYLHPKTSPIFKKNGYATENVVDPISSSPRFKG 203
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 365 LDGTETTCWSLQPKCLGSRDGRWSVRKAKLTENASLK 475
LD + W++QP C + DG A L++NA LK
Sbjct: 149 LDKLKDRLWNVQPTCALTGDGLLE-GLAWLSQNAKLK 184
>SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 96
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 96 CDHVLDEISVSRSINDGNIVLASFEL 19
CDH+L IS SR G + FEL
Sbjct: 23 CDHLLQYISNSRDSKAGLKIFLVFEL 48
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.135 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,329,238
Number of Sequences: 5004
Number of extensions: 49369
Number of successful extensions: 188
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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