Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS330D05f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 310 3e-85
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 310 3e-85
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 162 5e-63
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 156 1e-38
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 152 1e-37
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 152 1e-37
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 136 9e-33
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 73 9e-14
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 73 9e-14
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 73 9e-14
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 72 3e-13
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 72 3e-13
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 44 7e-05
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 40 0.001
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.006
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 35 0.041
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.094
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 32 0.22
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 31 0.66
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 31 0.66
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 1.5
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 1.5
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 1.5
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 1.5
AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical ... 29 2.0
AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical ... 29 2.0
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 29 2.7
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 27 6.2
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 310 bits (762), Expect = 3e-85
Identities = 143/173 (82%), Positives = 155/173 (89%)
Frame = +1
Query: 1 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 180
IDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQ
Sbjct: 73 IDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQ 132
Query: 181 TREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVP 360
TREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVP
Sbjct: 133 TREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVP 192
Query: 361 ISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKP 519
ISG++GDNMLE S+ MPWFKGW VERKEG A GK L+EALD+I+PP RPTD+P
Sbjct: 193 ISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRP 245
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 310 bits (762), Expect = 3e-85
Identities = 143/173 (82%), Positives = 155/173 (89%)
Frame = +1
Query: 1 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 180
IDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQ
Sbjct: 73 IDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQ 132
Query: 181 TREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVP 360
TREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVP
Sbjct: 133 TREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVP 192
Query: 361 ISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKP 519
ISG++GDNMLE S+ MPWFKGW VERKEG A GK L+EALD+I+PP RPTD+P
Sbjct: 193 ISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRP 245
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 162 bits (394), Expect(2) = 5e-63
Identities = 72/98 (73%), Positives = 82/98 (83%)
Frame = +1
Query: 226 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 405
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 406 MPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKP 519
MPWFKGW VERKEG A GK L+EALD+I+PP RPTD+P
Sbjct: 174 MPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRP 211
Score = 96.3 bits (229), Expect(2) = 5e-63
Identities = 42/45 (93%), Positives = 45/45 (100%)
Frame = +1
Query: 1 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 135
IDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 73 IDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 156 bits (378), Expect = 1e-38
Identities = 77/100 (77%), Positives = 84/100 (84%)
Frame = +1
Query: 1 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 180
IDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQ
Sbjct: 73 IDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQ 132
Query: 181 TREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKK 300
TREHALLA TLGVKQL V+ T P S R + I++
Sbjct: 133 TREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR 169
Score = 51.6 bits (118), Expect = 3e-07
Identities = 32/75 (42%), Positives = 37/75 (49%)
Frame = +2
Query: 290 KSRRKYPHTSRRLATTQLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTENAS 469
+S + P +SRR T Q L D TETTC C GSRDG + RK L E S
Sbjct: 152 RSPTRSPDSSRRSDTIQRLFHLSQSPDSTETTCLRSPRTCHGSRDGLLNARKETLPERPS 211
Query: 470 LKLSMPSCHLPAPLT 514
+L PS H A LT
Sbjct: 212 SRLLTPSSHHNAQLT 226
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 152 bits (369), Expect = 1e-37
Identities = 79/174 (45%), Positives = 115/174 (66%), Gaps = 1/174 (0%)
Frame = +1
Query: 1 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 180
+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQ
Sbjct: 236 MDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQ 295
Query: 181 TREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFV 357
T+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FV
Sbjct: 296 TKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFV 351
Query: 358 PISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKP 519
P+SG+ G+N+++ ++ W+ DG CL+E +D+ + P P+D P
Sbjct: 352 PVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQPPSDGP 392
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 152 bits (369), Expect = 1e-37
Identities = 79/174 (45%), Positives = 115/174 (66%), Gaps = 1/174 (0%)
Frame = +1
Query: 1 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 180
+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQ
Sbjct: 254 MDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQ 313
Query: 181 TREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFV 357
T+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FV
Sbjct: 314 TKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFV 369
Query: 358 PISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKP 519
P+SG+ G+N+++ ++ W+ DG CL+E +D+ + P P+D P
Sbjct: 370 PVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQPPSDGP 410
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 136 bits (329), Expect = 9e-33
Identities = 68/166 (40%), Positives = 101/166 (60%), Gaps = 1/166 (0%)
Frame = +1
Query: 1 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 180
+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G + GQ
Sbjct: 175 VEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQ 234
Query: 181 TREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFV 357
TREH++L T GVK L++ VNKMD + E RF+EI+ +++ +++K+G+NP + +V
Sbjct: 235 TREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYV 294
Query: 358 PISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILP 495
P SG G + + T W G C IE +D +LP
Sbjct: 295 PCSGLTGAFIKDRPTGSE--GNWY--------SGPCFIEFIDVLLP 330
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 73.3 bits (172), Expect = 9e-14
Identities = 44/107 (41%), Positives = 65/107 (60%), Gaps = 2/107 (1%)
Frame = +1
Query: 19 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 198
++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G QTREH L
Sbjct: 106 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLL 158
Query: 199 LAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 333
LA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 159 LARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 202
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 73.3 bits (172), Expect = 9e-14
Identities = 44/107 (41%), Positives = 65/107 (60%), Gaps = 2/107 (1%)
Frame = +1
Query: 19 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 198
++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G QTREH L
Sbjct: 107 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLL 159
Query: 199 LAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 333
LA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 160 LARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 203
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 73.3 bits (172), Expect = 9e-14
Identities = 44/107 (41%), Positives = 65/107 (60%), Gaps = 2/107 (1%)
Frame = +1
Query: 19 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 198
++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G QTREH L
Sbjct: 107 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLL 159
Query: 199 LAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 333
LA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 160 LARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 203
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 71.7 bits (168), Expect = 3e-13
Identities = 44/119 (36%), Positives = 63/119 (52%)
Frame = +1
Query: 1 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 180
I++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E Q
Sbjct: 96 INVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME-------Q 148
Query: 181 TREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 357
T+EH +LA +GVK + + +NK D E E + ++ E + G+N A +
Sbjct: 149 TKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHGFNGDATPVI 203
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 71.7 bits (168), Expect = 3e-13
Identities = 44/119 (36%), Positives = 63/119 (52%)
Frame = +1
Query: 1 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 180
I++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E Q
Sbjct: 96 INVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME-------Q 148
Query: 181 TREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 357
T+EH +LA +GVK + + +NK D E E + ++ E + G+N A +
Sbjct: 149 TKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHGFNGDATPVI 203
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 44.0 bits (99), Expect = 7e-05
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = +1
Query: 43 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 222
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 223 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY--NPAAVAFVPISGWHGDNMLE 393
++I+ +NK D E + + E K+V +K +G N V G+ + ML+
Sbjct: 127 RVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDENSPIVEMSLADGYFKEEMLQ 181
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/70 (40%), Positives = 33/70 (47%)
Frame = +1
Query: 43 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 222
VT +D PGH F G AD VL+VAA G E QT + A V
Sbjct: 206 VTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE-------QTAQSIKFAKDANV- 257
Query: 223 QLIVGVNKMD 252
QL+V VNK+D
Sbjct: 258 QLVVAVNKID 267
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 37.5 bits (83), Expect = 0.006
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +1
Query: 40 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 219
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 220 KQLIVGVNKMDSTEPPYSEPRFEEI 294
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 34.7 bits (76), Expect = 0.041
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +1
Query: 37 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 216
Y + +ID PGH DF + + D +L+VAA G QT + LAF
Sbjct: 102 YLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG-------VQAQTIANFWLAFEKN 154
Query: 217 VKQLIVGVNKMD 252
+ Q+I +NK+D
Sbjct: 155 I-QIIPVINKID 165
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.094
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 245 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 117
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 32.3 bits (70), Expect = 0.22
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +1
Query: 49 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 228
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 229 IVGVNKMDSTEPPYSEPR 282
++ +NK+D S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.7 bits (66), Expect = 0.66
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 1 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 147
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 189 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 30.7 bits (66), Expect = 0.66
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 1 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 147
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 64 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 308 PHTSRRLATTQLLSLSCPFLD 370
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 308 PHTSRRLATTQLLSLSCPFLD 370
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 308 PHTSRRLATTQLLSLSCPFLD 370
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 308 PHTSRRLATTQLLSLSCPFLD 370
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical
protein B0205.1b protein.
Length = 720
Score = 29.1 bits (62), Expect = 2.0
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 14/136 (10%)
Frame = +1
Query: 73 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVGV 240
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 445 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 504
Query: 241 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH-GDNML 390
D EP P EP +EEI + Y + + P + PI H +
Sbjct: 505 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVHLEEPKF 564
Query: 391 EPSTKMPWFKGWQVER 438
+P + M +G +R
Sbjct: 565 DPISSMNIGRGTLAQR 580
>AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical
protein B0205.1a protein.
Length = 745
Score = 29.1 bits (62), Expect = 2.0
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 14/136 (10%)
Frame = +1
Query: 73 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVGV 240
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 470 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 529
Query: 241 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH-GDNML 390
D EP P EP +EEI + Y + + P + PI H +
Sbjct: 530 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVHLEEPKF 589
Query: 391 EPSTKMPWFKGWQVER 438
+P + M +G +R
Sbjct: 590 DPISSMNIGRGTLAQR 605
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 37 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 147
+ + +ID+PGH DF + D A+++V +G
Sbjct: 110 FLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 28.3 bits (60), Expect = 3.5
Identities = 23/70 (32%), Positives = 30/70 (42%)
Frame = +1
Query: 43 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 222
+ IID PGH DF + D AVL++ G G G+ T L + +
Sbjct: 114 INIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQSQTFTVNRQLARYNV--- 165
Query: 223 QLIVGVNKMD 252
I VNKMD
Sbjct: 166 PFICFVNKMD 175
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 37 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 147
+ + +ID+PGH DF + D A+++V +G
Sbjct: 110 FLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 43 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 138
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 43 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 132
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 43 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 132
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 27.5 bits (58), Expect = 6.2
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Frame = -3
Query: 228 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 70
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 69 VSRSINDGNI 40
S S +D I
Sbjct: 84 FSGSKSDAEI 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.135 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,089,038
Number of Sequences: 27780
Number of extensions: 280497
Number of successful extensions: 902
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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