Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS330D01f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14972-1|AAA85660.1| 165|Homo sapiens ribosomal protein S10 pro... 182 9e-46
BX255972-2|CAH73100.1| 165|Homo sapiens ribosomal protein S10 p... 182 9e-46
BC073799-1|AAH73799.1| 165|Homo sapiens RPS10 protein protein. 182 9e-46
BC071946-1|AAH71946.1| 165|Homo sapiens ribosomal protein S10 p... 182 9e-46
BC070235-1|AAH70235.1| 165|Homo sapiens RPS10 protein protein. 182 9e-46
BC005012-1|AAH05012.1| 165|Homo sapiens RPS10 protein protein. 182 9e-46
BC001955-1|AAH01955.1| 165|Homo sapiens RPS10 protein protein. 182 9e-46
BC001032-1|AAH01032.1| 165|Homo sapiens ribosomal protein S10 p... 182 9e-46
AB209165-1|BAD92402.1| 174|Homo sapiens ribosomal protein S10 v... 179 5e-45
BX255972-3|CAH73101.1| 172|Homo sapiens ribosomal protein S10 p... 166 4e-41
AB007151-1|BAA25817.1| 78|Homo sapiens ribosomal protein S10 p... 118 2e-26
AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein. 103 5e-22
Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein. 99 5e-21
BC030568-1|AAH30568.1| 72|Homo sapiens LOC376693 protein protein. 66 7e-11
Z70761-1|CAA94807.1| 58|Homo sapiens ribosomal protein S10 pro... 45 2e-04
BC103835-1|AAI03836.1| 691|Homo sapiens PR domain containing 1,... 31 2.4
EF064715-1|ABK41898.1| 789|Homo sapiens PR domain containing 1,... 31 3.2
BC103834-1|AAI03835.1| 691|Homo sapiens PR domain containing 1,... 31 3.2
BC103833-1|AAI03834.1| 691|Homo sapiens PR domain containing 1,... 31 3.2
BC103832-1|AAI03833.1| 691|Homo sapiens PR domain containing 1,... 31 3.2
AY198415-1|AAO45624.1| 691|Homo sapiens PR domain-containing pr... 31 3.2
AY198414-1|AAO45623.1| 789|Homo sapiens PR domain-containing pr... 31 3.2
AL358952-2|CAI18902.1| 789|Homo sapiens PR domain containing 1,... 31 3.2
AL022067-3|CAI42296.1| 789|Homo sapiens PR domain containing 1,... 31 3.2
AF084199-1|AAC33300.1| 789|Homo sapiens beta-interferon gene po... 31 3.2
U66541-1|AAC51633.1| 1822|Homo sapiens beta4-integrin protein. 29 7.5
AJ251004-1|CAB61345.1| 1873|Homo sapiens integrin beta 4 protein. 29 7.5
>U14972-1|AAA85660.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 182 bits (442), Expect = 9e-46
Identities = 95/148 (64%), Positives = 107/148 (72%), Gaps = 7/148 (4%)
Frame = -3
Query: 519 KEGVMVAKKDXHAPKHXEL--EKIPXLQVIKAMQSLKSRGYVKEQFAWRHFXWYLTNEGI 346
KEGVMVAKKD H PKH EL + +P L V+KAMQSLKSRGYVKEQFAWRHF WYLTNEGI
Sbjct: 17 KEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGI 76
Query: 345 EYLRIFLHLPPEIVPATLKRSVRTETVXRGPVG----RPDAPARSAEDRXAYRRTPAAPG 178
+YLR +LHLPPEIVPATL+RS R ET P G RP R DR YRR+ PG
Sbjct: 77 QYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPPG 135
Query: 177 VAPHDKKADVGPGSA-DLEFKGGYGRGR 97
DKKA+ G GSA + +F+GG+GRGR
Sbjct: 136 A---DKKAEAGAGSATEFQFRGGFGRGR 160
>BX255972-2|CAH73100.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 182 bits (442), Expect = 9e-46
Identities = 95/148 (64%), Positives = 107/148 (72%), Gaps = 7/148 (4%)
Frame = -3
Query: 519 KEGVMVAKKDXHAPKHXEL--EKIPXLQVIKAMQSLKSRGYVKEQFAWRHFXWYLTNEGI 346
KEGVMVAKKD H PKH EL + +P L V+KAMQSLKSRGYVKEQFAWRHF WYLTNEGI
Sbjct: 17 KEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGI 76
Query: 345 EYLRIFLHLPPEIVPATLKRSVRTETVXRGPVG----RPDAPARSAEDRXAYRRTPAAPG 178
+YLR +LHLPPEIVPATL+RS R ET P G RP R DR YRR+ PG
Sbjct: 77 QYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPPG 135
Query: 177 VAPHDKKADVGPGSA-DLEFKGGYGRGR 97
DKKA+ G GSA + +F+GG+GRGR
Sbjct: 136 A---DKKAEAGAGSATEFQFRGGFGRGR 160
>BC073799-1|AAH73799.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 182 bits (442), Expect = 9e-46
Identities = 95/148 (64%), Positives = 107/148 (72%), Gaps = 7/148 (4%)
Frame = -3
Query: 519 KEGVMVAKKDXHAPKHXEL--EKIPXLQVIKAMQSLKSRGYVKEQFAWRHFXWYLTNEGI 346
KEGVMVAKKD H PKH EL + +P L V+KAMQSLKSRGYVKEQFAWRHF WYLTNEGI
Sbjct: 17 KEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGI 76
Query: 345 EYLRIFLHLPPEIVPATLKRSVRTETVXRGPVG----RPDAPARSAEDRXAYRRTPAAPG 178
+YLR +LHLPPEIVPATL+RS R ET P G RP R DR YRR+ PG
Sbjct: 77 QYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPPG 135
Query: 177 VAPHDKKADVGPGSA-DLEFKGGYGRGR 97
DKKA+ G GSA + +F+GG+GRGR
Sbjct: 136 A---DKKAEAGAGSATEFQFRGGFGRGR 160
>BC071946-1|AAH71946.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 182 bits (442), Expect = 9e-46
Identities = 95/148 (64%), Positives = 107/148 (72%), Gaps = 7/148 (4%)
Frame = -3
Query: 519 KEGVMVAKKDXHAPKHXEL--EKIPXLQVIKAMQSLKSRGYVKEQFAWRHFXWYLTNEGI 346
KEGVMVAKKD H PKH EL + +P L V+KAMQSLKSRGYVKEQFAWRHF WYLTNEGI
Sbjct: 17 KEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGI 76
Query: 345 EYLRIFLHLPPEIVPATLKRSVRTETVXRGPVG----RPDAPARSAEDRXAYRRTPAAPG 178
+YLR +LHLPPEIVPATL+RS R ET P G RP R DR YRR+ PG
Sbjct: 77 QYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPPG 135
Query: 177 VAPHDKKADVGPGSA-DLEFKGGYGRGR 97
DKKA+ G GSA + +F+GG+GRGR
Sbjct: 136 A---DKKAEAGAGSATEFQFRGGFGRGR 160
>BC070235-1|AAH70235.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 182 bits (442), Expect = 9e-46
Identities = 95/148 (64%), Positives = 107/148 (72%), Gaps = 7/148 (4%)
Frame = -3
Query: 519 KEGVMVAKKDXHAPKHXEL--EKIPXLQVIKAMQSLKSRGYVKEQFAWRHFXWYLTNEGI 346
KEGVMVAKKD H PKH EL + +P L V+KAMQSLKSRGYVKEQFAWRHF WYLTNEGI
Sbjct: 17 KEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGI 76
Query: 345 EYLRIFLHLPPEIVPATLKRSVRTETVXRGPVG----RPDAPARSAEDRXAYRRTPAAPG 178
+YLR +LHLPPEIVPATL+RS R ET P G RP R DR YRR+ PG
Sbjct: 77 QYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPPG 135
Query: 177 VAPHDKKADVGPGSA-DLEFKGGYGRGR 97
DKKA+ G GSA + +F+GG+GRGR
Sbjct: 136 A---DKKAEAGAGSATEFQFRGGFGRGR 160
>BC005012-1|AAH05012.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 182 bits (442), Expect = 9e-46
Identities = 95/148 (64%), Positives = 107/148 (72%), Gaps = 7/148 (4%)
Frame = -3
Query: 519 KEGVMVAKKDXHAPKHXEL--EKIPXLQVIKAMQSLKSRGYVKEQFAWRHFXWYLTNEGI 346
KEGVMVAKKD H PKH EL + +P L V+KAMQSLKSRGYVKEQFAWRHF WYLTNEGI
Sbjct: 17 KEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGI 76
Query: 345 EYLRIFLHLPPEIVPATLKRSVRTETVXRGPVG----RPDAPARSAEDRXAYRRTPAAPG 178
+YLR +LHLPPEIVPATL+RS R ET P G RP R DR YRR+ PG
Sbjct: 77 QYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPPG 135
Query: 177 VAPHDKKADVGPGSA-DLEFKGGYGRGR 97
DKKA+ G GSA + +F+GG+GRGR
Sbjct: 136 A---DKKAEAGAGSATEFQFRGGFGRGR 160
>BC001955-1|AAH01955.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 182 bits (442), Expect = 9e-46
Identities = 95/148 (64%), Positives = 107/148 (72%), Gaps = 7/148 (4%)
Frame = -3
Query: 519 KEGVMVAKKDXHAPKHXEL--EKIPXLQVIKAMQSLKSRGYVKEQFAWRHFXWYLTNEGI 346
KEGVMVAKKD H PKH EL + +P L V+KAMQSLKSRGYVKEQFAWRHF WYLTNEGI
Sbjct: 17 KEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGI 76
Query: 345 EYLRIFLHLPPEIVPATLKRSVRTETVXRGPVG----RPDAPARSAEDRXAYRRTPAAPG 178
+YLR +LHLPPEIVPATL+RS R ET P G RP R DR YRR+ PG
Sbjct: 77 QYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPPG 135
Query: 177 VAPHDKKADVGPGSA-DLEFKGGYGRGR 97
DKKA+ G GSA + +F+GG+GRGR
Sbjct: 136 A---DKKAEAGAGSATEFQFRGGFGRGR 160
>BC001032-1|AAH01032.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 182 bits (442), Expect = 9e-46
Identities = 95/148 (64%), Positives = 107/148 (72%), Gaps = 7/148 (4%)
Frame = -3
Query: 519 KEGVMVAKKDXHAPKHXEL--EKIPXLQVIKAMQSLKSRGYVKEQFAWRHFXWYLTNEGI 346
KEGVMVAKKD H PKH EL + +P L V+KAMQSLKSRGYVKEQFAWRHF WYLTNEGI
Sbjct: 17 KEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGI 76
Query: 345 EYLRIFLHLPPEIVPATLKRSVRTETVXRGPVG----RPDAPARSAEDRXAYRRTPAAPG 178
+YLR +LHLPPEIVPATL+RS R ET P G RP R DR YRR+ PG
Sbjct: 77 QYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPPG 135
Query: 177 VAPHDKKADVGPGSA-DLEFKGGYGRGR 97
DKKA+ G GSA + +F+GG+GRGR
Sbjct: 136 A---DKKAEAGAGSATEFQFRGGFGRGR 160
>AB209165-1|BAD92402.1| 174|Homo sapiens ribosomal protein S10
variant protein.
Length = 174
Score = 179 bits (436), Expect = 5e-45
Identities = 94/148 (63%), Positives = 106/148 (71%), Gaps = 7/148 (4%)
Frame = -3
Query: 519 KEGVMVAKKDXHAPKHXEL--EKIPXLQVIKAMQSLKSRGYVKEQFAWRHFXWYLTNEGI 346
KEGVMVAKKD H PKH EL + +P L V+KAMQSLKSRGYVKEQFAWRHF WYLTNEGI
Sbjct: 26 KEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGI 85
Query: 345 EYLRIFLHLPPEIVPATLKRSVRTETVXRGPVG----RPDAPARSAEDRXAYRRTPAAPG 178
+YLR +LHLPPEIVPA L+RS R ET P G RP R DR YRR+ PG
Sbjct: 86 QYLRDYLHLPPEIVPAILRRS-RPETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPPG 144
Query: 177 VAPHDKKADVGPGSA-DLEFKGGYGRGR 97
DKKA+ G GSA + +F+GG+GRGR
Sbjct: 145 A---DKKAEAGAGSATEFQFRGGFGRGR 169
>BX255972-3|CAH73101.1| 172|Homo sapiens ribosomal protein S10
protein.
Length = 172
Score = 166 bits (404), Expect = 4e-41
Identities = 88/135 (65%), Positives = 96/135 (71%), Gaps = 6/135 (4%)
Frame = -3
Query: 519 KEGVMVAKKDXHAPKHXEL--EKIPXLQVIKAMQSLKSRGYVKEQFAWRHFXWYLTNEGI 346
KEGVMVAKKD H PKH EL + +P L V+KAMQSLKSRGYVKEQFAWRHF WYLTNEGI
Sbjct: 17 KEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGI 76
Query: 345 EYLRIFLHLPPEIVPATLKRSVRTETVXRGPVG----RPDAPARSAEDRXAYRRTPAAPG 178
+YLR +LHLPPEIVPATL+RS R ET P G RP R DR YRR+ PG
Sbjct: 77 QYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPPG 135
Query: 177 VAPHDKKADVGPGSA 133
DKKA+ G GSA
Sbjct: 136 A---DKKAEAGAGSA 147
>AB007151-1|BAA25817.1| 78|Homo sapiens ribosomal protein S10
protein.
Length = 78
Score = 118 bits (283), Expect = 2e-26
Identities = 54/69 (78%), Positives = 59/69 (85%), Gaps = 2/69 (2%)
Frame = -3
Query: 519 KEGVMVAKKDXHAPKHXEL--EKIPXLQVIKAMQSLKSRGYVKEQFAWRHFXWYLTNEGI 346
KEGVMVAKKD H PKH EL + +P L V+KAMQSLKSRGYVKEQFAWRHF WYLTNEGI
Sbjct: 10 KEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGI 69
Query: 345 EYLRIFLHL 319
+YLR +LHL
Sbjct: 70 QYLRDYLHL 78
>AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein.
Length = 4684
Score = 103 bits (246), Expect = 5e-22
Identities = 48/79 (60%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Frame = -3
Query: 519 KEGVMVAKKDXHAPK-HXELEKIPXLQVIKAMQSLKSRGYVKEQFAWRHFXWYLTNEGIE 343
+EGVMVAKKD H + + LQV++AM SL++RG V+E FAW HF WYLTNEGI
Sbjct: 21 REGVMVAKKDRRPRSLHPHVPGVTNLQVMRAMASLRARGLVRETFAWCHFYWYLTNEGIA 80
Query: 342 YLRIFLHLPPEIVPATLKR 286
+LR +LHLPPEIVPA+L+R
Sbjct: 81 HLRQYLHLPPEIVPASLQR 99
>Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein.
Length = 4684
Score = 99 bits (238), Expect = 5e-21
Identities = 47/79 (59%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Frame = -3
Query: 519 KEGVMVAKKDXHAPK-HXELEKIPXLQVIKAMQSLKSRGYVKEQFAWRHFXWYLTNEGIE 343
+EGVMVAKKD H + + LQV++AM SL++RG V+E FAW HF WYLTNEGI
Sbjct: 21 REGVMVAKKDRRPRSLHPHVPGVTNLQVMRAMASLRARGLVRETFAWCHFFWYLTNEGIA 80
Query: 342 YLRIFLHLPPEIVPATLKR 286
+LR +LHLPPEIV A+L+R
Sbjct: 81 HLRQYLHLPPEIVAASLQR 99
>BC030568-1|AAH30568.1| 72|Homo sapiens LOC376693 protein protein.
Length = 72
Score = 66.1 bits (154), Expect = 7e-11
Identities = 33/44 (75%), Positives = 36/44 (81%), Gaps = 2/44 (4%)
Frame = -3
Query: 519 KEGVMVAKKDXHAPKHXEL--EKIPXLQVIKAMQSLKSRGYVKE 394
KEGVMVAKKD H PKH EL + P L+V+KAMQSLKSRGYVKE
Sbjct: 17 KEGVMVAKKDVHMPKHPELADKNAPNLRVMKAMQSLKSRGYVKE 60
>Z70761-1|CAA94807.1| 58|Homo sapiens ribosomal protein S10
protein.
Length = 58
Score = 44.8 bits (101), Expect = 2e-04
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -3
Query: 246 RPDAPARSAEDRXAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYGRGR 97
RP R DR YRR+ PG DKKA+ G G + +F+GG+GRGR
Sbjct: 7 RPARLTRGEADRDTYRRSAVPPGA---DKKAEAGLGQQPEFQFRGGFGRGR 54
>BC103835-1|AAI03836.1| 691|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 691
Score = 31.1 bits (67), Expect = 2.4
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -3
Query: 321 LPPEIVPATLKRSVRTET-VXRGPVGRPDAPARSAEDRXAYRRTPAAPGVAPHDKKADVG 145
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 171 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 230
Query: 144 PGSADLEFKGGY 109
PGS + Y
Sbjct: 231 PGSQEHRDSNAY 242
>EF064715-1|ABK41898.1| 789|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 789
Score = 30.7 bits (66), Expect = 3.2
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -3
Query: 321 LPPEIVPATLKRSVRTET-VXRGPVGRPDAPARSAEDRXAYRRTPAAPGVAPHDKKADVG 145
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 269 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 328
Query: 144 PGSAD 130
PGS +
Sbjct: 329 PGSQE 333
>BC103834-1|AAI03835.1| 691|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 691
Score = 30.7 bits (66), Expect = 3.2
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -3
Query: 321 LPPEIVPATLKRSVRTET-VXRGPVGRPDAPARSAEDRXAYRRTPAAPGVAPHDKKADVG 145
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 171 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 230
Query: 144 PGSAD 130
PGS +
Sbjct: 231 PGSQE 235
>BC103833-1|AAI03834.1| 691|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 691
Score = 30.7 bits (66), Expect = 3.2
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -3
Query: 321 LPPEIVPATLKRSVRTET-VXRGPVGRPDAPARSAEDRXAYRRTPAAPGVAPHDKKADVG 145
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 171 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 230
Query: 144 PGSAD 130
PGS +
Sbjct: 231 PGSQE 235
>BC103832-1|AAI03833.1| 691|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 691
Score = 30.7 bits (66), Expect = 3.2
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -3
Query: 321 LPPEIVPATLKRSVRTET-VXRGPVGRPDAPARSAEDRXAYRRTPAAPGVAPHDKKADVG 145
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 171 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 230
Query: 144 PGSAD 130
PGS +
Sbjct: 231 PGSQE 235
>AY198415-1|AAO45624.1| 691|Homo sapiens PR domain-containing
protein 1 beta protein.
Length = 691
Score = 30.7 bits (66), Expect = 3.2
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -3
Query: 321 LPPEIVPATLKRSVRTET-VXRGPVGRPDAPARSAEDRXAYRRTPAAPGVAPHDKKADVG 145
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 171 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 230
Query: 144 PGSAD 130
PGS +
Sbjct: 231 PGSQE 235
>AY198414-1|AAO45623.1| 789|Homo sapiens PR domain-containing
protein 1 alpha protein.
Length = 789
Score = 30.7 bits (66), Expect = 3.2
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -3
Query: 321 LPPEIVPATLKRSVRTET-VXRGPVGRPDAPARSAEDRXAYRRTPAAPGVAPHDKKADVG 145
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 269 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 328
Query: 144 PGSAD 130
PGS +
Sbjct: 329 PGSQE 333
>AL358952-2|CAI18902.1| 789|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 789
Score = 30.7 bits (66), Expect = 3.2
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -3
Query: 321 LPPEIVPATLKRSVRTET-VXRGPVGRPDAPARSAEDRXAYRRTPAAPGVAPHDKKADVG 145
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 269 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 328
Query: 144 PGSAD 130
PGS +
Sbjct: 329 PGSQE 333
>AL022067-3|CAI42296.1| 789|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 789
Score = 30.7 bits (66), Expect = 3.2
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -3
Query: 321 LPPEIVPATLKRSVRTET-VXRGPVGRPDAPARSAEDRXAYRRTPAAPGVAPHDKKADVG 145
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 269 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 328
Query: 144 PGSAD 130
PGS +
Sbjct: 329 PGSQE 333
>AF084199-1|AAC33300.1| 789|Homo sapiens beta-interferon gene
positive-regulatory domain I binding factor protein.
Length = 789
Score = 30.7 bits (66), Expect = 3.2
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -3
Query: 321 LPPEIVPATLKRSVRTET-VXRGPVGRPDAPARSAEDRXAYRRTPAAPGVAPHDKKADVG 145
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 269 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 328
Query: 144 PGSAD 130
PGS +
Sbjct: 329 PGSQE 333
>U66541-1|AAC51633.1| 1822|Homo sapiens beta4-integrin protein.
Length = 1822
Score = 29.5 bits (63), Expect = 7.5
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Frame = -3
Query: 363 LTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVXRGPVGRPDAPARSAEDRXAYR-RTPA 187
L E ++ R+ LPPE++P S R+ P G PD + R TP
Sbjct: 1378 LLGEELDLRRVTWRLPPELIPRLSASSGRSSDA-EAPHGPPDDGGAGGKGGSLPRSATPG 1436
Query: 186 APGVAPHDKKADVG-PGSAD 130
PG + + D PGS +
Sbjct: 1437 PPGEHLVNGRMDFAFPGSTN 1456
>AJ251004-1|CAB61345.1| 1873|Homo sapiens integrin beta 4 protein.
Length = 1873
Score = 29.5 bits (63), Expect = 7.5
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Frame = -3
Query: 363 LTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVXRGPVGRPDAPARSAEDRXAYR-RTPA 187
L E ++ R+ LPPE++P S R+ P G PD + R TP
Sbjct: 1377 LLGEELDLRRVTWRLPPELIPRLSASSGRSSDA-EAPHGPPDDGGAGGKGGSLPRSATPG 1435
Query: 186 APGVAPHDKKADVG-PGSAD 130
PG + + D PGS +
Sbjct: 1436 PPGEHLVNGRMDFAFPGSTN 1455
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,634,768
Number of Sequences: 237096
Number of extensions: 1138695
Number of successful extensions: 3620
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3563
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -