Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS330C12f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001492-1|AAN71247.1| 225|Drosophila melanogaster LD27989p pro... 147 7e-36
AY058621-1|AAL13850.1| 426|Drosophila melanogaster LD31377p pro... 147 7e-36
AJ006219-1|CAA06918.1| 426|Drosophila melanogaster clathrin-ass... 147 7e-36
AF110231-1|AAF14247.1| 426|Drosophila melanogaster clathrin-ass... 147 7e-36
AE014297-967|AAF54399.1| 426|Drosophila melanogaster CG9388-PA ... 147 7e-36
AY070712-1|AAL48183.1| 437|Drosophila melanogaster SD05403p pro... 52 6e-07
AJ005962-1|CAA06785.1| 437|Drosophila melanogaster clathrin-ass... 52 6e-07
AF110232-1|AAF14248.1| 437|Drosophila melanogaster clathrin-ass... 52 6e-07
AE014297-3160|AAF56002.3| 437|Drosophila melanogaster CG7057-PB... 52 6e-07
AE014297-3159|AAF56001.1| 437|Drosophila melanogaster CG7057-PA... 52 6e-07
AY069388-1|AAL39533.1| 415|Drosophila melanogaster LD09732p pro... 37 0.019
AJ009657-1|CAA08768.1| 415|Drosophila melanogaster Mu3 subunit ... 37 0.019
AF110233-1|AAF14249.1| 415|Drosophila melanogaster clathrin-ass... 37 0.019
AE014298-989|AAF46231.1| 415|Drosophila melanogaster CG3035-PA ... 37 0.019
>BT001492-1|AAN71247.1| 225|Drosophila melanogaster LD27989p
protein.
Length = 225
Score = 147 bits (357), Expect = 7e-36
Identities = 68/74 (91%), Positives = 71/74 (95%), Gaps = 1/74 (1%)
Frame = -2
Query: 520 GKEYLMRAHFGLPSVECEE-VDGKPPIQVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWV 344
GKEYLMRAHFGLPSVE E+ +GKPPIQV+FEIPYFTTSGIQVRYLKIIEKSGYQALPWV
Sbjct: 152 GKEYLMRAHFGLPSVESEDNTEGKPPIQVRFEIPYFTTSGIQVRYLKIIEKSGYQALPWV 211
Query: 343 RYITQNGDYQLRTN 302
RYITQNGDYQLRTN
Sbjct: 212 RYITQNGDYQLRTN 225
>AY058621-1|AAL13850.1| 426|Drosophila melanogaster LD31377p
protein.
Length = 426
Score = 147 bits (357), Expect = 7e-36
Identities = 68/74 (91%), Positives = 71/74 (95%), Gaps = 1/74 (1%)
Frame = -2
Query: 520 GKEYLMRAHFGLPSVECEE-VDGKPPIQVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWV 344
GKEYLMRAHFGLPSVE E+ +GKPPIQV+FEIPYFTTSGIQVRYLKIIEKSGYQALPWV
Sbjct: 353 GKEYLMRAHFGLPSVESEDNTEGKPPIQVRFEIPYFTTSGIQVRYLKIIEKSGYQALPWV 412
Query: 343 RYITQNGDYQLRTN 302
RYITQNGDYQLRTN
Sbjct: 413 RYITQNGDYQLRTN 426
>AJ006219-1|CAA06918.1| 426|Drosophila melanogaster
clathrin-associated protein protein.
Length = 426
Score = 147 bits (357), Expect = 7e-36
Identities = 68/74 (91%), Positives = 71/74 (95%), Gaps = 1/74 (1%)
Frame = -2
Query: 520 GKEYLMRAHFGLPSVECEE-VDGKPPIQVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWV 344
GKEYLMRAHFGLPSVE E+ +GKPPIQV+FEIPYFTTSGIQVRYLKIIEKSGYQALPWV
Sbjct: 353 GKEYLMRAHFGLPSVESEDNTEGKPPIQVRFEIPYFTTSGIQVRYLKIIEKSGYQALPWV 412
Query: 343 RYITQNGDYQLRTN 302
RYITQNGDYQLRTN
Sbjct: 413 RYITQNGDYQLRTN 426
>AF110231-1|AAF14247.1| 426|Drosophila melanogaster
clathrin-associated adaptor complexAP-1 medium chain
protein.
Length = 426
Score = 147 bits (357), Expect = 7e-36
Identities = 68/74 (91%), Positives = 71/74 (95%), Gaps = 1/74 (1%)
Frame = -2
Query: 520 GKEYLMRAHFGLPSVECEE-VDGKPPIQVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWV 344
GKEYLMRAHFGLPSVE E+ +GKPPIQV+FEIPYFTTSGIQVRYLKIIEKSGYQALPWV
Sbjct: 353 GKEYLMRAHFGLPSVESEDNTEGKPPIQVRFEIPYFTTSGIQVRYLKIIEKSGYQALPWV 412
Query: 343 RYITQNGDYQLRTN 302
RYITQNGDYQLRTN
Sbjct: 413 RYITQNGDYQLRTN 426
>AE014297-967|AAF54399.1| 426|Drosophila melanogaster CG9388-PA
protein.
Length = 426
Score = 147 bits (357), Expect = 7e-36
Identities = 68/74 (91%), Positives = 71/74 (95%), Gaps = 1/74 (1%)
Frame = -2
Query: 520 GKEYLMRAHFGLPSVECEE-VDGKPPIQVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWV 344
GKEYLMRAHFGLPSVE E+ +GKPPIQV+FEIPYFTTSGIQVRYLKIIEKSGYQALPWV
Sbjct: 353 GKEYLMRAHFGLPSVESEDNTEGKPPIQVRFEIPYFTTSGIQVRYLKIIEKSGYQALPWV 412
Query: 343 RYITQNGDYQLRTN 302
RYITQNGDYQLRTN
Sbjct: 413 RYITQNGDYQLRTN 426
>AY070712-1|AAL48183.1| 437|Drosophila melanogaster SD05403p
protein.
Length = 437
Score = 51.6 bits (118), Expect = 6e-07
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Frame = -2
Query: 517 KEYLMRAHFGLPSVECEEVDGKPPIQVKFEIPYFTTSGIQVRYLKIIEK----SGYQALP 350
KE + A L + ++ +PPI + FE+P F SG +VRYLK+ E S + +
Sbjct: 364 KETQLSAEIELLETDTKKKWTRPPISMNFEVP-FAPSGFKVRYLKVFEPKLNYSDHDVVK 422
Query: 349 WVRYITQNGDYQLR 308
WVRYI ++G Y+ R
Sbjct: 423 WVRYIGRSGLYETR 436
>AJ005962-1|CAA06785.1| 437|Drosophila melanogaster
clathrin-associated protein protein.
Length = 437
Score = 51.6 bits (118), Expect = 6e-07
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Frame = -2
Query: 517 KEYLMRAHFGLPSVECEEVDGKPPIQVKFEIPYFTTSGIQVRYLKIIEK----SGYQALP 350
KE + A L + ++ +PPI + FE+P F SG +VRYLK+ E S + +
Sbjct: 364 KETQLSAEIELLETDTKKKWTRPPISMNFEVP-FAPSGFKVRYLKVFEPKLNYSDHDVVK 422
Query: 349 WVRYITQNGDYQLR 308
WVRYI ++G Y+ R
Sbjct: 423 WVRYIGRSGLYETR 436
>AF110232-1|AAF14248.1| 437|Drosophila melanogaster
clathrin-associated adaptor complexAP-2 medium chain
protein.
Length = 437
Score = 51.6 bits (118), Expect = 6e-07
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Frame = -2
Query: 517 KEYLMRAHFGLPSVECEEVDGKPPIQVKFEIPYFTTSGIQVRYLKIIEK----SGYQALP 350
KE + A L + ++ +PPI + FE+P F SG +VRYLK+ E S + +
Sbjct: 364 KETQLSAEIELLETDTKKKWTRPPISMNFEVP-FAPSGFKVRYLKVFEPKLNYSDHDVVK 422
Query: 349 WVRYITQNGDYQLR 308
WVRYI ++G Y+ R
Sbjct: 423 WVRYIGRSGLYETR 436
>AE014297-3160|AAF56002.3| 437|Drosophila melanogaster CG7057-PB,
isoform B protein.
Length = 437
Score = 51.6 bits (118), Expect = 6e-07
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Frame = -2
Query: 517 KEYLMRAHFGLPSVECEEVDGKPPIQVKFEIPYFTTSGIQVRYLKIIEK----SGYQALP 350
KE + A L + ++ +PPI + FE+P F SG +VRYLK+ E S + +
Sbjct: 364 KETQLSAEIELLETDTKKKWTRPPISMNFEVP-FAPSGFKVRYLKVFEPKLNYSDHDVVK 422
Query: 349 WVRYITQNGDYQLR 308
WVRYI ++G Y+ R
Sbjct: 423 WVRYIGRSGLYETR 436
>AE014297-3159|AAF56001.1| 437|Drosophila melanogaster CG7057-PA,
isoform A protein.
Length = 437
Score = 51.6 bits (118), Expect = 6e-07
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Frame = -2
Query: 517 KEYLMRAHFGLPSVECEEVDGKPPIQVKFEIPYFTTSGIQVRYLKIIEK----SGYQALP 350
KE + A L + ++ +PPI + FE+P F SG +VRYLK+ E S + +
Sbjct: 364 KETQLSAEIELLETDTKKKWTRPPISMNFEVP-FAPSGFKVRYLKVFEPKLNYSDHDVVK 422
Query: 349 WVRYITQNGDYQLR 308
WVRYI ++G Y+ R
Sbjct: 423 WVRYIGRSGLYETR 436
>AY069388-1|AAL39533.1| 415|Drosophila melanogaster LD09732p
protein.
Length = 415
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = -2
Query: 463 VDGKPPIQVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLR 308
+D P + V+F+I SG++V L + + Y+ V+Y+T+ G +Q+R
Sbjct: 364 IDANPSVNVQFQISQLAVSGLKVNRLDMYGEK-YKPFKGVKYLTKAGKFQVR 414
>AJ009657-1|CAA08768.1| 415|Drosophila melanogaster Mu3 subunit of
clathrin-associatedprotein complex AP-3 protein.
Length = 415
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = -2
Query: 463 VDGKPPIQVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLR 308
+D P + V+F+I SG++V L + + Y+ V+Y+T+ G +Q+R
Sbjct: 364 IDANPSVNVQFQISQLAVSGLKVNRLDMYGEK-YKPFKGVKYLTKAGKFQVR 414
>AF110233-1|AAF14249.1| 415|Drosophila melanogaster
clathrin-associated adaptor complexAP-3 medium chain
protein.
Length = 415
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = -2
Query: 463 VDGKPPIQVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLR 308
+D P + V+F+I SG++V L + + Y+ V+Y+T+ G +Q+R
Sbjct: 364 IDANPSVNVQFQISQLAVSGLKVNRLDMYGEK-YKPFKGVKYLTKAGKFQVR 414
>AE014298-989|AAF46231.1| 415|Drosophila melanogaster CG3035-PA
protein.
Length = 415
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = -2
Query: 463 VDGKPPIQVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLR 308
+D P + V+F+I SG++V L + + Y+ V+Y+T+ G +Q+R
Sbjct: 364 IDANPSVNVQFQISQLAVSGLKVNRLDMYGEK-YKPFKGVKYLTKAGKFQVR 414
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,949,932
Number of Sequences: 53049
Number of extensions: 363669
Number of successful extensions: 709
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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