Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS330C07f
(346 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 29 0.20
SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|c... 28 0.35
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 27 1.1
SPCPB1C11.01 |amt1||ammonium transporter Amt1|Schizosaccharomyce... 27 1.1
SPBC29A3.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 27 1.1
SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2... 26 1.4
SPBC342.04 |||adhesion regulating molecule protein homolog|Schiz... 25 2.5
SPBPB10D8.04c |||membrane transporter |Schizosaccharomyces pombe... 25 2.5
SPBPB10D8.05c |||membrane transporter |Schizosaccharomyces pombe... 25 2.5
SPCC584.02 |cuf2||Cu metalloregulatory transcription factor Cuf2... 25 2.5
SPBPB10D8.06c |||membrane transporter |Schizosaccharomyces pombe... 25 2.5
SPBPB10D8.07c |||membrane transporter |Schizosaccharomyces pombe... 25 2.5
SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces po... 25 3.3
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 25 4.4
SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyc... 25 4.4
SPCC191.11 |inv1||beta-fructofuranosidase|Schizosaccharomyces po... 24 5.8
SPBC11C11.05 |||KRE9 family cell wall biosynthesis protein |Schi... 24 5.8
SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual 24 7.6
SPCPB16A4.05c |||urease accessory protein UREG |Schizosaccharomy... 24 7.6
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 24 7.6
SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr 1||... 24 7.6
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 29.1 bits (62), Expect = 0.20
Identities = 25/102 (24%), Positives = 45/102 (44%)
Frame = +2
Query: 17 SSSKIY*FRMACSVSDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVA 196
S SK+ +A S + ++ D P+ +T S L+ F+T + + + VLPS D
Sbjct: 26 SPSKVCRDNIALSEHNVITVLDTPQRSTQCDSLLKSFSTPLV----SGSEDVLPSPRDAL 81
Query: 197 TEKTQKSLFDGIEKFDSSQLKHTETQEKXRFRDKTLSQRRKP 322
+KS+ D + +S + T T R + ++ P
Sbjct: 82 NITNKKSVTDNLLLSLTSSNQSTNTNLNPSSRVEIINLNSSP 123
>SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 28.3 bits (60), Expect = 0.35
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Frame = +2
Query: 83 LPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSA-------EDVATEKTQKSLFDGIEKF 241
L K +TDL +Q E FN C + D + +V A E V E+ + DG+E
Sbjct: 428 LNKWSTDLTTQTEVFNKLCDQVSDWDRTLVDNGALISKLYTETVEAEQMSNRIDDGLEYV 487
Query: 242 DSSQ 253
SSQ
Sbjct: 488 SSSQ 491
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 26.6 bits (56), Expect = 1.1
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -2
Query: 201 SVATSSADGSTIFSLVSTSRRQLVLKPSS*LFRSVATLGRSFRE 70
SV + DG + + +++RQ V+ P + F + +GR F+E
Sbjct: 86 SVVAFTKDGERLVGV--SAKRQAVINPENTFFATKRLIGRRFKE 127
>SPCPB1C11.01 |amt1||ammonium transporter Amt1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 497
Score = 26.6 bits (56), Expect = 1.1
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = -2
Query: 297 LSRKRXFS*VSVCFSWLESNFSIPSNKDFWVFSVATSSADGSTIFSLVSTSRRQLVLKPS 118
L+R+R S +S+ F + S + FW +S+ S G I SL + RQ + +PS
Sbjct: 57 LARRR--SAISMLFLSMMSVAIVAFQWFFWGYSLTFSHEGGPYIGSLANFGLRQTLGRPS 114
Query: 117 S 115
S
Sbjct: 115 S 115
>SPBC29A3.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 398
Score = 26.6 bits (56), Expect = 1.1
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Frame = +2
Query: 68 PSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGI----E 235
P K L K+ +L+S L+ SCL+D T+ K ++ +EKTQ+ +FD + +
Sbjct: 14 PGNKCLAKL-NELESILKDAKKSCLKDPTTSMKELV-----ACSEKTQQ-VFDDLKRTEK 66
Query: 236 KFDSSQLKHTETQEK 280
KF +S + +T EK
Sbjct: 67 KFHTSLNRFGKTLEK 81
>SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 426
Score = 26.2 bits (55), Expect = 1.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -1
Query: 208 GLLSGNVFSRRKHNLFIGVDVTETAGVEAFELTLQ 104
G ++G +S +LFIGVD G+ F LQ
Sbjct: 385 GEIAGTAYSSSGDSLFIGVDDPMLGGILEFRRPLQ 419
>SPBC342.04 |||adhesion regulating molecule protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 291
Score = 25.4 bits (53), Expect = 2.5
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 247 EPAEAHRDSGEXPLPGQDVVAAEKAHQNLL 336
+P E+ ++S E P D + + +A +NLL
Sbjct: 144 QPTESSKESSEIGAPNSDEINSSEAVRNLL 173
>SPBPB10D8.04c |||membrane transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 25.4 bits (53), Expect = 2.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 210 WVFSVATSSADGSTIFSLVSTSRRQL 133
W+FSVA S IFS + T R ++
Sbjct: 122 WIFSVAMSFFTAWVIFSTILTKRAKI 147
>SPBPB10D8.05c |||membrane transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 25.4 bits (53), Expect = 2.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 210 WVFSVATSSADGSTIFSLVSTSRRQL 133
W+FSVA S IFS + T R ++
Sbjct: 122 WIFSVAMSFFTAWVIFSTILTKRAKI 147
>SPCC584.02 |cuf2||Cu metalloregulatory transcription factor
Cuf2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 25.4 bits (53), Expect = 2.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 173 LPSAEDVATEKTQKSLFDGIEKFDSSQLKHTE 268
LP +ED+ + SL D + D+SQL E
Sbjct: 117 LPISEDILGYRKPLSLTDASNRIDASQLNEKE 148
>SPBPB10D8.06c |||membrane transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 25.4 bits (53), Expect = 2.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 210 WVFSVATSSADGSTIFSLVSTSRRQL 133
W+FSVA S IFS + T R ++
Sbjct: 122 WIFSVAMSFFTAWVIFSTILTKRAKI 147
>SPBPB10D8.07c |||membrane transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 25.4 bits (53), Expect = 2.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 210 WVFSVATSSADGSTIFSLVSTSRRQL 133
W+FSVA S IFS + T R ++
Sbjct: 122 WIFSVAMSFFTAWVIFSTILTKRAKI 147
>SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 507
Score = 25.0 bits (52), Expect = 3.3
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -3
Query: 314 SAATTSCPGSGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQQTEAQS 165
SAA + + AS+ ++ TS +SGSS W R EA S
Sbjct: 227 SAAPPDSASESTPASTSYASSTTSATSTSTTSGSSGSSDWGRSSFYEADS 276
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 24.6 bits (51), Expect = 4.4
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +2
Query: 77 KDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQL 256
+DL +A S L NT R +D N K L E++ ++ + L EKF + +
Sbjct: 786 RDLVNMAKRFLSSLFSVNT---RKMDVNVKTDLVIGENIELQRYLQQLTQYSEKFLNKES 842
Query: 257 KHT 265
++T
Sbjct: 843 ENT 845
>SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 581
Score = 24.6 bits (51), Expect = 4.4
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 140 LRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKH 262
L DVDT ++VL E Q+ DGI +FD+ +KH
Sbjct: 200 LADVDTENEVVLSVLEKWIKNVVQEYDIDGI-RFDA--IKH 237
>SPCC191.11 |inv1||beta-fructofuranosidase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 581
Score = 24.2 bits (50), Expect = 5.8
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -2
Query: 219 KDFWVFSVATSSADGSTIFSLVSTSRRQLVLKPSS*LFRSVATLGRSF 76
KDF+ ++ SS+ + + + S Q + + +FRS T+ R F
Sbjct: 340 KDFYASALYHSSSANADVIGVGWASNWQYTNQAPTQVFRSAMTVARKF 387
>SPBC11C11.05 |||KRE9 family cell wall biosynthesis protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 284
Score = 24.2 bits (50), Expect = 5.8
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 267 SVCFSWLESNFSIP-SNKDFWVFSVATSSADGSTIFSLVSTS 145
++ FSW ESN IP + VF + + S D +++ TS
Sbjct: 38 AISFSWEESNTGIPLEDITNTVFYICSGSMDAPQPCAVLYTS 79
>SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 23.8 bits (49), Expect = 7.6
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 53 SVSDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVA 196
SVS TP + P V +L + E F+T D D+ P+ E V+
Sbjct: 265 SVSSTPPVHPPPPVPQNLSAVNEEFDTK-KNDFDSKLPESTPAVEKVS 311
>SPCPB16A4.05c |||urease accessory protein UREG |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 286
Score = 23.8 bits (49), Expect = 7.6
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -1
Query: 187 FSRRKHNLFIGVDVTETAGVEAFELTLQVCGDLGEVFQGGSVTH 56
FSRR + +G V G L LQ+C LGE + G VT+
Sbjct: 82 FSRRAFTIGVGGPV----GSGKTALLLQLCRLLGEKYSIGVVTN 121
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 23.8 bits (49), Expect = 7.6
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -2
Query: 201 SVATSSADGSTIFSLVSTSRRQLVLKPSS*LFRSVATLGRSFRE 70
S SSA S+ +SRR V+ S FR+VA + RE
Sbjct: 15 SFTNSSAQQLFSKSIAHSSRRNFVISSSCTKFRNVAIQRNAKRE 58
>SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 753
Score = 23.8 bits (49), Expect = 7.6
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Frame = -3
Query: 314 SAATTSCP---GSGSSPESRCASAGSNQTSRYRRIK 216
S ATTS P G S ES S S+ Y+RIK
Sbjct: 275 SYATTSLPSTPGKRLSKESLAMSEASSINPEYKRIK 310
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,437,952
Number of Sequences: 5004
Number of extensions: 27102
Number of successful extensions: 132
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 132
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 102111100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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