Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS330C07f
(346 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089633-1|AAL90371.1| 129|Drosophila melanogaster RE50273p pro... 106 7e-24
AL033125-9|CAA21832.1| 129|Drosophila melanogaster EG:EG0007.11... 106 7e-24
AE014298-598|AAF45920.1| 129|Drosophila melanogaster CG4944-PB,... 106 7e-24
AE014298-597|AAF45919.1| 129|Drosophila melanogaster CG4944-PA,... 106 7e-24
AE014298-599|AAN09116.1| 97|Drosophila melanogaster CG4944-PC,... 105 2e-23
BT011108-1|AAR82775.1| 395|Drosophila melanogaster LD44162p pro... 30 0.70
AF289996-1|AAG02461.1| 1475|Drosophila melanogaster thyroid horm... 30 0.70
AE014296-3591|AAF51757.2| 1475|Drosophila melanogaster CG7162-PA... 30 0.70
AE014297-4024|AAF56641.2| 469|Drosophila melanogaster CG18472-P... 29 1.6
AE014297-836|AAF54303.3| 1167|Drosophila melanogaster CG31349-PE... 29 1.6
AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-P... 29 1.6
AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-P... 29 1.6
AY058544-1|AAL13773.1| 560|Drosophila melanogaster LD24478p pro... 28 3.7
AE014298-2788|AAF48903.1| 560|Drosophila melanogaster CG7332-PA... 28 3.7
X98881-1|CAA67384.1| 865|Drosophila melanogaster nuclear hormon... 27 5.0
X95251-1|CAA64540.1| 520|Drosophila melanogaster Tid56 protein ... 27 5.0
X95249-1|CAA64538.1| 520|Drosophila melanogaster Tid56 protein ... 27 5.0
X95247-1|CAA64536.1| 520|Drosophila melanogaster Tid56 protein ... 27 5.0
U88570-1|AAB53050.1| 3190|Drosophila melanogaster CREB-binding p... 27 5.0
U01087-1|AAA19975.1| 864|Drosophila melanogaster nuclear hormon... 27 5.0
EF057959-1|ABL84894.1| 413|Drosophila melanogaster Nup98 protein. 27 5.0
EF057956-1|ABL84891.1| 413|Drosophila melanogaster Nup98 protein. 27 5.0
EF057954-1|ABL84889.1| 413|Drosophila melanogaster Nup98 protein. 27 5.0
EF057952-1|ABL84887.1| 413|Drosophila melanogaster Nup98 protein. 27 5.0
EF057951-1|ABL84886.1| 413|Drosophila melanogaster Nup98 protein. 27 5.0
EF057950-1|ABL84885.1| 413|Drosophila melanogaster Nup98 protein. 27 5.0
EF057949-1|ABL84884.1| 413|Drosophila melanogaster Nup98 protein. 27 5.0
EF057948-1|ABL84883.1| 413|Drosophila melanogaster Nup98 protein. 27 5.0
AY051691-1|AAK93115.1| 458|Drosophila melanogaster LD23856p pro... 27 5.0
AF238308-1|AAF69494.1| 866|Drosophila melanogaster nuclear rece... 27 5.0
AE014298-1361|AAF46516.2| 3276|Drosophila melanogaster CG15319-P... 27 5.0
AE014296-3498|AAF51692.2| 862|Drosophila melanogaster CG18023-P... 27 5.0
AE013599-3672|AAS64764.1| 520|Drosophila melanogaster CG5504-PB... 27 5.0
AE013599-1485|AAF58512.1| 458|Drosophila melanogaster CG8520-PA... 27 5.0
EF057961-1|ABL84896.1| 413|Drosophila melanogaster Nup98 protein. 27 6.5
EF057960-1|ABL84895.1| 413|Drosophila melanogaster Nup98 protein. 27 6.5
EF057958-1|ABL84893.1| 413|Drosophila melanogaster Nup98 protein. 27 6.5
EF057957-1|ABL84892.1| 413|Drosophila melanogaster Nup98 protein. 27 6.5
EF057955-1|ABL84890.1| 413|Drosophila melanogaster Nup98 protein. 27 6.5
EF057953-1|ABL84888.1| 413|Drosophila melanogaster Nup98 protein. 27 6.5
EF057947-1|ABL84882.1| 413|Drosophila melanogaster Nup98 protein. 27 6.5
AY061631-1|AAL29179.1| 120|Drosophila melanogaster SD10843p pro... 27 6.5
AE014297-3391|AAF56190.3| 1960|Drosophila melanogaster CG10198-P... 27 6.5
AE014297-3155|AAF55996.2| 2059|Drosophila melanogaster CG12499-P... 27 6.5
AY118976-1|AAM50836.2| 147|Drosophila melanogaster LP01241p pro... 27 8.7
>AY089633-1|AAL90371.1| 129|Drosophila melanogaster RE50273p
protein.
Length = 129
Score = 106 bits (255), Expect = 7e-24
Identities = 50/84 (59%), Positives = 63/84 (75%)
Frame = +2
Query: 68 PSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDS 247
P+LKDLPKVA +LKSQLEGFN L++ T EKI+LP+AEDVA EKTQ+S+F+GI F+
Sbjct: 6 PALKDLPKVAENLKSQLEGFNQDKLKNASTQEKIILPTAEDVAAEKTQQSIFEGITAFNQ 65
Query: 248 SQLKHTETQEKXRFRDKTLSQRRK 319
+ LKHTET EK DK ++ K
Sbjct: 66 NNLKHTETNEKNPLPDKEAIEQEK 89
Score = 56.0 bits (129), Expect = 1e-08
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +2
Query: 68 PSLKDLPKVATDLKSQLEG---FNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEK 238
P+ +D+ T +S EG FN + L+ +TNEK LP E + EK + GIE
Sbjct: 42 PTAEDVAAEKTQ-QSIFEGITAFNQNNLKHTETNEKNPLPDKEAIEQEKEKNQFIAGIEN 100
Query: 239 FDSSQLKHTETQEKXRFRDKTLSQRRK 319
FD+ +LKHTET EK K + + K
Sbjct: 101 FDAKKLKHTETNEKNVLPTKEVIEAEK 127
>AL033125-9|CAA21832.1| 129|Drosophila melanogaster EG:EG0007.11
protein.
Length = 129
Score = 106 bits (255), Expect = 7e-24
Identities = 50/84 (59%), Positives = 63/84 (75%)
Frame = +2
Query: 68 PSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDS 247
P+LKDLPKVA +LKSQLEGFN L++ T EKI+LP+AEDVA EKTQ+S+F+GI F+
Sbjct: 6 PALKDLPKVAENLKSQLEGFNQDKLKNASTQEKIILPTAEDVAAEKTQQSIFEGITAFNQ 65
Query: 248 SQLKHTETQEKXRFRDKTLSQRRK 319
+ LKHTET EK DK ++ K
Sbjct: 66 NNLKHTETNEKNPLPDKEAIEQEK 89
Score = 56.0 bits (129), Expect = 1e-08
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +2
Query: 68 PSLKDLPKVATDLKSQLEG---FNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEK 238
P+ +D+ T +S EG FN + L+ +TNEK LP E + EK + GIE
Sbjct: 42 PTAEDVAAEKTQ-QSIFEGITAFNQNNLKHTETNEKNPLPDKEAIEQEKEKNQFIAGIEN 100
Query: 239 FDSSQLKHTETQEKXRFRDKTLSQRRK 319
FD+ +LKHTET EK K + + K
Sbjct: 101 FDAKKLKHTETNEKNVLPTKEVIEAEK 127
>AE014298-598|AAF45920.1| 129|Drosophila melanogaster CG4944-PB,
isoform B protein.
Length = 129
Score = 106 bits (255), Expect = 7e-24
Identities = 50/84 (59%), Positives = 63/84 (75%)
Frame = +2
Query: 68 PSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDS 247
P+LKDLPKVA +LKSQLEGFN L++ T EKI+LP+AEDVA EKTQ+S+F+GI F+
Sbjct: 6 PALKDLPKVAENLKSQLEGFNQDKLKNASTQEKIILPTAEDVAAEKTQQSIFEGITAFNQ 65
Query: 248 SQLKHTETQEKXRFRDKTLSQRRK 319
+ LKHTET EK DK ++ K
Sbjct: 66 NNLKHTETNEKNPLPDKEAIEQEK 89
Score = 56.0 bits (129), Expect = 1e-08
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +2
Query: 68 PSLKDLPKVATDLKSQLEG---FNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEK 238
P+ +D+ T +S EG FN + L+ +TNEK LP E + EK + GIE
Sbjct: 42 PTAEDVAAEKTQ-QSIFEGITAFNQNNLKHTETNEKNPLPDKEAIEQEKEKNQFIAGIEN 100
Query: 239 FDSSQLKHTETQEKXRFRDKTLSQRRK 319
FD+ +LKHTET EK K + + K
Sbjct: 101 FDAKKLKHTETNEKNVLPTKEVIEAEK 127
>AE014298-597|AAF45919.1| 129|Drosophila melanogaster CG4944-PA,
isoform A protein.
Length = 129
Score = 106 bits (255), Expect = 7e-24
Identities = 50/84 (59%), Positives = 63/84 (75%)
Frame = +2
Query: 68 PSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDS 247
P+LKDLPKVA +LKSQLEGFN L++ T EKI+LP+AEDVA EKTQ+S+F+GI F+
Sbjct: 6 PALKDLPKVAENLKSQLEGFNQDKLKNASTQEKIILPTAEDVAAEKTQQSIFEGITAFNQ 65
Query: 248 SQLKHTETQEKXRFRDKTLSQRRK 319
+ LKHTET EK DK ++ K
Sbjct: 66 NNLKHTETNEKNPLPDKEAIEQEK 89
Score = 56.0 bits (129), Expect = 1e-08
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +2
Query: 68 PSLKDLPKVATDLKSQLEG---FNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEK 238
P+ +D+ T +S EG FN + L+ +TNEK LP E + EK + GIE
Sbjct: 42 PTAEDVAAEKTQ-QSIFEGITAFNQNNLKHTETNEKNPLPDKEAIEQEKEKNQFIAGIEN 100
Query: 239 FDSSQLKHTETQEKXRFRDKTLSQRRK 319
FD+ +LKHTET EK K + + K
Sbjct: 101 FDAKKLKHTETNEKNVLPTKEVIEAEK 127
>AE014298-599|AAN09116.1| 97|Drosophila melanogaster CG4944-PC,
isoform C protein.
Length = 97
Score = 105 bits (251), Expect = 2e-23
Identities = 49/77 (63%), Positives = 60/77 (77%)
Frame = +2
Query: 68 PSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDS 247
P+LKDLPKVA +LKSQLEGFN L++ T EKI+LP+AEDVA EKTQ+S+F+GI F+
Sbjct: 6 PALKDLPKVAENLKSQLEGFNQDKLKNASTQEKIILPTAEDVAAEKTQQSIFEGITAFNQ 65
Query: 248 SQLKHTETQEKXRFRDK 298
+ LKHTET EK DK
Sbjct: 66 NNLKHTETNEKNPLPDK 82
>BT011108-1|AAR82775.1| 395|Drosophila melanogaster LD44162p
protein.
Length = 395
Score = 30.3 bits (65), Expect = 0.70
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = -3
Query: 314 SAATTSCPGSGSSPESRCASAGSNQTSRYRRIK 216
S++T+ C GSGSS S AS+GS+ T + ++ K
Sbjct: 75 SSSTSGCSGSGSSMSS-SASSGSSDTQKEKKRK 106
>AF289996-1|AAG02461.1| 1475|Drosophila melanogaster thyroid hormone
receptor-associatedprotein TRAP220 protein.
Length = 1475
Score = 30.3 bits (65), Expect = 0.70
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = -3
Query: 314 SAATTSCPGSGSSPESRCASAGSNQTSRYRRIK 216
S++T+ C GSGSS S AS+GS+ T + ++ K
Sbjct: 760 SSSTSGCSGSGSSMSS-SASSGSSDTQKEKKRK 791
>AE014296-3591|AAF51757.2| 1475|Drosophila melanogaster CG7162-PA
protein.
Length = 1475
Score = 30.3 bits (65), Expect = 0.70
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = -3
Query: 314 SAATTSCPGSGSSPESRCASAGSNQTSRYRRIK 216
S++T+ C GSGSS S AS+GS+ T + ++ K
Sbjct: 760 SSSTSGCSGSGSSMSS-SASSGSSDTQKEKKRK 791
>AE014297-4024|AAF56641.2| 469|Drosophila melanogaster CG18472-PA
protein.
Length = 469
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +2
Query: 143 RDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKXRFRDK 298
RD + EKI+ ++ V T+K Q S D + + +QLK+ EK +F ++
Sbjct: 181 RDQEQREKIISNHSKSVTTDKLQ-SERDSLYERLQAQLKNLSQLEKEQFAER 231
>AE014297-836|AAF54303.3| 1167|Drosophila melanogaster CG31349-PE,
isoform E protein.
Length = 1167
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = -3
Query: 314 SAATTSCPGSGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQQTE 174
S A+ GSG S SRCAS + R + SG L E
Sbjct: 88 STASGGSAGSGGSGSSRCASVNGDANCDSRSLTPSGGGPCSGLNDAE 134
>AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-PD,
isoform D protein.
Length = 7210
Score = 29.1 bits (62), Expect = 1.6
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +2
Query: 74 LKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQ 253
L L ++L+SQ + + D D + K S ED+ E + + + ++ DS
Sbjct: 2204 LNKLNVFLSELQSQSDVSSPESALDTDIDLKEGSGSQEDIEPEAKRPKMLESEQQLDS-- 2261
Query: 254 LKHTETQEK 280
K TETQE+
Sbjct: 2262 YKQTETQEE 2270
>AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-PA,
isoform A protein.
Length = 9270
Score = 29.1 bits (62), Expect = 1.6
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +2
Query: 74 LKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQ 253
L L ++L+SQ + + D D + K S ED+ E + + + ++ DS
Sbjct: 2204 LNKLNVFLSELQSQSDVSSPESALDTDIDLKEGSGSQEDIEPEAKRPKMLESEQQLDS-- 2261
Query: 254 LKHTETQEK 280
K TETQE+
Sbjct: 2262 YKQTETQEE 2270
>AY058544-1|AAL13773.1| 560|Drosophila melanogaster LD24478p
protein.
Length = 560
Score = 27.9 bits (59), Expect = 3.7
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = -3
Query: 314 SAATTSCPGSGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQQTEAQSFHWCRRHGD- 138
S TT+ + SSP + ASA ++ +SR S SSQ ++ A R
Sbjct: 44 SHKTTTITTASSSPRTSGASASASSSSRSASAPASSSSQQEKQPMLNATDMRELREIKQL 103
Query: 137 SWC*SLRADSSGLW 96
W ++R D W
Sbjct: 104 LWGDNVREDVFKRW 117
>AE014298-2788|AAF48903.1| 560|Drosophila melanogaster CG7332-PA
protein.
Length = 560
Score = 27.9 bits (59), Expect = 3.7
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = -3
Query: 314 SAATTSCPGSGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQQTEAQSFHWCRRHGD- 138
S TT+ + SSP + ASA ++ +SR S SSQ ++ A R
Sbjct: 44 SHKTTTITTASSSPRTSGASASASSSSRSASAPASSSSQQEKQPMLNATDMRELREIKQL 103
Query: 137 SWC*SLRADSSGLW 96
W ++R D W
Sbjct: 104 LWGDNVREDVFKRW 117
>X98881-1|CAA67384.1| 865|Drosophila melanogaster nuclear hormone
receptor protein.
Length = 865
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -3
Query: 314 SAATTSCPGSGSSPESRCASAGSNQTSRYRRIKTSGSS 201
S+++ S + SSP+S C+SA S+ +SR ++ SS
Sbjct: 240 SSSSPSSSAAHSSPDSGCSSASSSGSSRSCGSSSASSS 277
>X95251-1|CAA64540.1| 520|Drosophila melanogaster Tid56 protein
protein.
Length = 520
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -3
Query: 314 SAATTSCPGSGSSPESRCASAGSNQTSRYRRI-KTSGSSQWQRLQQTEAQ 168
+A + PG+G++ ++ A+AGS + K+ G QW ++T+A+
Sbjct: 445 TAGASEEPGAGAAAKASAAAAGSGASKPGPGAEKSEGKDQWTDNEKTKAK 494
>X95249-1|CAA64538.1| 520|Drosophila melanogaster Tid56 protein
protein.
Length = 520
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -3
Query: 314 SAATTSCPGSGSSPESRCASAGSNQTSRYRRI-KTSGSSQWQRLQQTEAQ 168
+A + PG+G++ ++ A+AGS + K+ G QW ++T+A+
Sbjct: 445 TAGASEEPGAGAAAKASAAAAGSGASKPGPGAEKSEGKDQWTDNEKTKAK 494
>X95247-1|CAA64536.1| 520|Drosophila melanogaster Tid56 protein
protein.
Length = 520
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -3
Query: 314 SAATTSCPGSGSSPESRCASAGSNQTSRYRRI-KTSGSSQWQRLQQTEAQ 168
+A + PG+G++ ++ A+AGS + K+ G QW ++T+A+
Sbjct: 445 TAGASEEPGAGAAAKASAAAAGSGASKPGPGAEKSEGKDQWTDNEKTKAK 494
>U88570-1|AAB53050.1| 3190|Drosophila melanogaster CREB-binding
protein homolog protein.
Length = 3190
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 320 AFSAATTSCPGSGSSPESRCASAGSNQTS 234
A +AAT + GSGS+ S +AG++ TS
Sbjct: 1403 ASAAATCASSGSGSNSSSGATAAGASSTS 1431
>U01087-1|AAA19975.1| 864|Drosophila melanogaster nuclear hormone
receptor superfamilyprotein protein.
Length = 864
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -3
Query: 314 SAATTSCPGSGSSPESRCASAGSNQTSRYRRIKTSGSS 201
S+++ S + SSP+S C+SA S+ +SR ++ SS
Sbjct: 240 SSSSPSSSAAHSSPDSGCSSASSSGSSRSCGSSSASSS 277
>EF057959-1|ABL84894.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 131 TSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSS 250
TS + T+ + + + +KSLFDG+E+FD+S
Sbjct: 24 TSNQYKISTSNNPAPMKVKTLGSTLNRKSLFDGLEEFDAS 63
>EF057956-1|ABL84891.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 131 TSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSS 250
TS + T+ + + + +KSLFDG+E+FD+S
Sbjct: 24 TSNQYKISTSNNPAPMKVKTLGSTLNRKSLFDGLEEFDAS 63
>EF057954-1|ABL84889.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 131 TSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSS 250
TS + T+ + + + +KSLFDG+E+FD+S
Sbjct: 24 TSNQYKISTSNNPAPMKVKTLGSTLNRKSLFDGLEEFDAS 63
>EF057952-1|ABL84887.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 131 TSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSS 250
TS + T+ + + + +KSLFDG+E+FD+S
Sbjct: 24 TSNQYKISTSNNPAPMKVKTLGSTLNRKSLFDGLEEFDAS 63
>EF057951-1|ABL84886.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 131 TSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSS 250
TS + T+ + + + +KSLFDG+E+FD+S
Sbjct: 24 TSNQYKISTSNNPAPMKVKTLGSTLNRKSLFDGLEEFDAS 63
>EF057950-1|ABL84885.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 131 TSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSS 250
TS + T+ + + + +KSLFDG+E+FD+S
Sbjct: 24 TSNQYKISTSNNPAPMKVKTLGSTLNRKSLFDGLEEFDAS 63
>EF057949-1|ABL84884.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 131 TSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSS 250
TS + T+ + + + +KSLFDG+E+FD+S
Sbjct: 24 TSNQYKISTSNNPAPMKVKTLGSTLNRKSLFDGLEEFDAS 63
>EF057948-1|ABL84883.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 131 TSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSS 250
TS + T+ + + + +KSLFDG+E+FD+S
Sbjct: 24 TSNQYKISTSNNPAPMKVKTLGSTLNRKSLFDGLEEFDAS 63
>AY051691-1|AAK93115.1| 458|Drosophila melanogaster LD23856p
protein.
Length = 458
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +2
Query: 65 TPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 202
T ++D+P++ D+K+Q+ F T L D N ++ + + DVA E
Sbjct: 350 TVLIRDVPQLTLDVKAQMRRFIT--LIDTLYNNRVRVVISSDVALE 393
>AF238308-1|AAF69494.1| 866|Drosophila melanogaster nuclear
receptor E78A protein.
Length = 866
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -3
Query: 314 SAATTSCPGSGSSPESRCASAGSNQTSRYRRIKTSGSS 201
S+++ S + SSP+S C+SA S+ +SR ++ SS
Sbjct: 240 SSSSPSSSAAHSSPDSGCSSASSSGSSRSCGSSSASSS 277
>AE014298-1361|AAF46516.2| 3276|Drosophila melanogaster CG15319-PB
protein.
Length = 3276
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 320 AFSAATTSCPGSGSSPESRCASAGSNQTS 234
A +AAT + GSGS+ S +AG++ TS
Sbjct: 1403 ASAAATCASSGSGSNSSSGATAAGASSTS 1431
>AE014296-3498|AAF51692.2| 862|Drosophila melanogaster CG18023-PA,
isoform A protein.
Length = 862
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -3
Query: 314 SAATTSCPGSGSSPESRCASAGSNQTSRYRRIKTSGSS 201
S+++ S + SSP+S C+SA S+ +SR ++ SS
Sbjct: 236 SSSSPSSSAAHSSPDSGCSSASSSGSSRSCGSSSASSS 273
>AE013599-3672|AAS64764.1| 520|Drosophila melanogaster CG5504-PB,
isoform B protein.
Length = 520
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -3
Query: 314 SAATTSCPGSGSSPESRCASAGSNQTSRYRRI-KTSGSSQWQRLQQTEAQ 168
+A + PG+G++ ++ A+AGS + K+ G QW ++T+A+
Sbjct: 445 TAGASEEPGAGAAAKASAAAAGSGASKPGPGAEKSEGKDQWTDNEKTKAK 494
>AE013599-1485|AAF58512.1| 458|Drosophila melanogaster CG8520-PA
protein.
Length = 458
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +2
Query: 65 TPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 202
T ++D+P++ D+K+Q+ F T L D N ++ + + DVA E
Sbjct: 350 TVLIRDVPQLTLDVKAQMRRFIT--LIDTLYNNRVRVVISSDVALE 393
>EF057961-1|ABL84896.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2
Query: 209 QKSLFDGIEKFDSS 250
+KSLFDG+E+FD+S
Sbjct: 50 RKSLFDGLEEFDAS 63
>EF057960-1|ABL84895.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2
Query: 209 QKSLFDGIEKFDSS 250
+KSLFDG+E+FD+S
Sbjct: 50 RKSLFDGLEEFDAS 63
>EF057958-1|ABL84893.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2
Query: 209 QKSLFDGIEKFDSS 250
+KSLFDG+E+FD+S
Sbjct: 50 RKSLFDGLEEFDAS 63
>EF057957-1|ABL84892.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2
Query: 209 QKSLFDGIEKFDSS 250
+KSLFDG+E+FD+S
Sbjct: 50 RKSLFDGLEEFDAS 63
>EF057955-1|ABL84890.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2
Query: 209 QKSLFDGIEKFDSS 250
+KSLFDG+E+FD+S
Sbjct: 50 RKSLFDGLEEFDAS 63
>EF057953-1|ABL84888.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2
Query: 209 QKSLFDGIEKFDSS 250
+KSLFDG+E+FD+S
Sbjct: 50 RKSLFDGLEEFDAS 63
>EF057947-1|ABL84882.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2
Query: 209 QKSLFDGIEKFDSS 250
+KSLFDG+E+FD+S
Sbjct: 50 RKSLFDGLEEFDAS 63
>AY061631-1|AAL29179.1| 120|Drosophila melanogaster SD10843p
protein.
Length = 120
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 308 ATTSCPGSGSSPESRCASAG 249
A SCP +G++P S CA G
Sbjct: 24 AAGSCPAAGTAPRSCCAGQG 43
>AE014297-3391|AAF56190.3| 1960|Drosophila melanogaster CG10198-PA
protein.
Length = 1960
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2
Query: 209 QKSLFDGIEKFDSS 250
+KSLFDG+E+FD+S
Sbjct: 665 RKSLFDGLEEFDAS 678
>AE014297-3155|AAF55996.2| 2059|Drosophila melanogaster CG12499-PA
protein.
Length = 2059
Score = 27.1 bits (57), Expect = 6.5
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +2
Query: 182 AEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKXRFRDKTLSQRRKPTRTS 334
A++ T K +K E FD S L+ TET K S++ K + TS
Sbjct: 32 AKESDTPKKKKKKDKTKESFDESTLESTETDPADSTPSKKKSKKTKTSDTS 82
>AY118976-1|AAM50836.2| 147|Drosophila melanogaster LP01241p
protein.
Length = 147
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 45 WPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTST 155
WPAP T+PP T P + R + +S A + TST
Sbjct: 20 WPAP--TVPPPTTRKLVPTSPRSAPTSSPRATTTTST 54
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,423,183
Number of Sequences: 53049
Number of extensions: 328629
Number of successful extensions: 1763
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1759
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 819378027
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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