Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS330C07f
(346 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosi... 52 1e-07
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 30 0.51
Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z48009-5|CAA88086.1| 329|Caenorhabditis elegans Hypothetical pr... 28 1.6
AL034393-13|CAA22317.1| 340|Caenorhabditis elegans Hypothetical... 27 3.6
AF040645-7|AAB94977.2| 304|Caenorhabditis elegans Hypothetical ... 27 3.6
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 27 4.8
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 27 4.8
AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical ... 27 4.8
U61948-4|AAB03146.1| 316|Caenorhabditis elegans Hypothetical pr... 26 6.3
U41996-3|AAA83472.2| 362|Caenorhabditis elegans More of ms prot... 26 6.3
AL034393-6|CAA22321.1| 507|Caenorhabditis elegans Hypothetical ... 26 6.3
AF013952-1|AAC47749.1| 362|Caenorhabditis elegans mom-2 protein. 26 6.3
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 26 8.3
AF016658-4|AAB66043.1| 242|Caenorhabditis elegans Hypothetical ... 26 8.3
>AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosin
(four thymosin repeatprotein) protein 1 protein.
Length = 151
Score = 52.0 bits (119), Expect = 1e-07
Identities = 29/69 (42%), Positives = 36/69 (52%)
Frame = +2
Query: 113 QLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKXRFR 292
++E F+++ L EKIVLPSA+D+ EK L D I F S LK TET EK
Sbjct: 53 EIEHFDSTKLHSTPVKEKIVLPSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVLP 112
Query: 293 DKTLSQRRK 319
T R K
Sbjct: 113 SPTDVAREK 121
Score = 47.6 bits (108), Expect = 2e-06
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +2
Query: 71 SLKDLPKVATDLKSQL-EGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDS 247
++ +LPK+ +L + EG L+ V+T EK VLP+ EDVA EK IE FDS
Sbjct: 3 AVTELPKMNQELAGAVREGLE---LKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDS 59
Query: 248 SQLKHTETQEK 280
++L T +EK
Sbjct: 60 TKLHSTPVKEK 70
Score = 39.9 bits (89), Expect = 5e-04
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +2
Query: 68 PSLKDLP--KVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKF 241
PS D+ K +L ++ F + L+ +T EK VLPS DVA EKT + F
Sbjct: 74 PSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVLPSPTDVAREKTLQM----AASF 129
Query: 242 DSSQLKHTET 271
D S L H ET
Sbjct: 130 DKSALHHVET 139
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 29.9 bits (64), Expect = 0.51
Identities = 24/93 (25%), Positives = 35/93 (37%), Gaps = 4/93 (4%)
Frame = -3
Query: 326 WWAFSAATTSCPGSGSSPESR-CASA--GSNQTSRYRRIKTSGSSQWQRLQQTEAQSFHW 156
W A++ + +C G G+ SR CASA G T ++ Q A F
Sbjct: 1208 WGAWTTCSATCGGCGTQTRSRTCASAPYGCPCTGDLTETQSCAKQVCTTGAQCCAGKFVA 1267
Query: 155 CRRHGDSWC*SLRAD-SSGLWRPWGGLSGRECH 60
G +C + +G W W L G C+
Sbjct: 1268 TGYDGAQYCQDNTPEVCTGTWTEWATLEGAVCN 1300
>Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical
protein T23F11.3b protein.
Length = 366
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 299 SCPGSGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRL 186
S P SGSS E+ + + + S R + TS SSQ+ ++
Sbjct: 74 SLPKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111
>Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical
protein T23F11.3a protein.
Length = 356
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 299 SCPGSGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRL 186
S P SGSS E+ + + + S R + TS SSQ+ ++
Sbjct: 74 SLPKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111
>Z48009-5|CAA88086.1| 329|Caenorhabditis elegans Hypothetical
protein AH6.7 protein.
Length = 329
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -1
Query: 205 LLSGNVFSRRKHNLFIGVDVTETAGVEAFEL 113
LL N+FS H +F+G+ + E + F+L
Sbjct: 58 LLYQNLFSANIHQIFLGITIVERLNIAFFKL 88
>AL034393-13|CAA22317.1| 340|Caenorhabditis elegans Hypothetical
protein Y18D10A.17 protein.
Length = 340
Score = 27.1 bits (57), Expect = 3.6
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = +2
Query: 122 GFNTSCLRDVDTNEKIVLPSAEDV--ATEKTQKSLFDGIEKFDSSQLKHTETQEK--XRF 289
G N + V+ EK+ S D A EK Q+ L D +EK + E +EK F
Sbjct: 169 GHNNYGVPRVNHREKLKFESDFDFEKANEKFQEVLVDNLEKLNIEDKAEPEVEEKKDAAF 228
Query: 290 RDKTLS 307
DK S
Sbjct: 229 YDKKTS 234
>AF040645-7|AAB94977.2| 304|Caenorhabditis elegans Hypothetical
protein F52C6.11 protein.
Length = 304
Score = 27.1 bits (57), Expect = 3.6
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +2
Query: 59 SDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDV 193
S S K+ KVA K QLE SCL ++T E+I A D+
Sbjct: 243 SSEKSTKEKLKVAK--KYQLENLKASCLAKINTLEEIKAALAGDL 285
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 26.6 bits (56), Expect = 4.8
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 158 NEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKXRFRDKTL-SQRRKPTRTS 334
N K +PS E ++K +K EK + + + +EK + +DK + +K +R
Sbjct: 1213 NVKFNMPSQETDGSKKDKKEPHKEKEKDKEKEKEEDKGKEKEKHKDKDKDKEHKKKSRED 1272
Query: 335 WTE 343
TE
Sbjct: 1273 ETE 1275
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 194 ATEKTQKSLFDGIEKFDSSQLKHTETQEKXRFRDKTLSQRRK 319
ATE+ + G+EK ++ K T+ E+ + + SQ+R+
Sbjct: 385 ATEQLKDGTIKGLEKNQKTEEKETKKNEEKKSEGASESQKRR 426
>AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical
protein Y55B1AL.3a protein.
Length = 923
Score = 26.6 bits (56), Expect = 4.8
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 6 FYPLPHQKYIDSEWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTPMKR 167
F P+P + + + P TSP+SP + S++ P VSVTS P ++
Sbjct: 19 FSPIPKFSRLRTPRTSREYVCPLKSTSPQSPSS---STENEPPPVSVTSPPARK 69
>U61948-4|AAB03146.1| 316|Caenorhabditis elegans Hypothetical
protein C46A5.6 protein.
Length = 316
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +2
Query: 56 VSDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEK 166
++++P +D P + FNT+ D+D NE+
Sbjct: 158 ITESPKNRDFPLFFSSFDDTTVLFNTTIAGDIDVNER 194
>U41996-3|AAA83472.2| 362|Caenorhabditis elegans More of ms protein
2 protein.
Length = 362
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 326 WWAFSAATTSCPGSGSSP 273
WW S TS SGSSP
Sbjct: 25 WWLLSKTDTSSANSGSSP 42
>AL034393-6|CAA22321.1| 507|Caenorhabditis elegans Hypothetical
protein Y18D10A.8 protein.
Length = 507
Score = 26.2 bits (55), Expect = 6.3
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 48 PAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTPMK 164
PAP V +PP TSP + +V+S ++P S PM+
Sbjct: 133 PAPTVGIPPSATSPPT----QVTSSVTSPVPSSPQPPMQ 167
>AF013952-1|AAC47749.1| 362|Caenorhabditis elegans mom-2 protein.
Length = 362
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 326 WWAFSAATTSCPGSGSSP 273
WW S TS SGSSP
Sbjct: 25 WWLLSKTDTSSANSGSSP 42
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 194 ATEKTQKSLFDGIEKFDSSQLKHTETQEKXRFRDKT 301
ATE+ + G+EK ++ K T+ E+ + DK+
Sbjct: 385 ATEQLKDGTIKGLEKNQKTEEKETKKNEEKKSEDKS 420
>AF016658-4|AAB66043.1| 242|Caenorhabditis elegans Hypothetical
protein B0047.3 protein.
Length = 242
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 71 SLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVA 196
S++DL K+A QLE T CL ++T ++I A + A
Sbjct: 174 SMRDLLKLAKQF--QLENLKTVCLSKINTLDEIEASMAHNPA 213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,035,112
Number of Sequences: 27780
Number of extensions: 155767
Number of successful extensions: 649
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 451081596
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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