Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS330C07f
         (346 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                26   0.11 
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    23   0.77 
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    23   1.0  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   1.3  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              21   3.1  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    20   7.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    20   7.2  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     20   9.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   9.5  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     20   9.5  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 26.2 bits (55), Expect = 0.11
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = -3

Query: 308 ATTSCPGSGSSPESRCASAGSNQTS 234
           ATTS PGSGS P S   S  S+  S
Sbjct: 231 ATTSTPGSGSLPASPADSGVSDVES 255


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 23.4 bits (48), Expect = 0.77
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 53  SVSDTPSLKDLPKVATDLKS 112
           SVS  PS+K + K ATD  S
Sbjct: 156 SVSCVPSVKHVAKCATDFSS 175


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 287 SGSSPESRCASAGSNQTSRYRRIKTSGSSQWQ 192
           SGS      +S  +NQTS   R  TS ++  +
Sbjct: 601 SGSGSAENLSSGSNNQTSSASRENTSNTTSME 632


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -3

Query: 290 GSGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQ 183
           G GSS +   +   S+ T +    K   SS W++L+
Sbjct: 188 GEGSSGDDLSSEWDSDYTDKSNEKKIPKSSGWRKLR 223


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = +2

Query: 101 DLKSQLEGFNTSCLRDVDTNEKIV 172
           +LKS L    + C++++ T ++I+
Sbjct: 21  ELKSGLHTVQSVCMKEIGTAQQII 44


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = -1

Query: 115 LTLQVCGDLGEVFQ 74
           +++Q+ GDLG+V++
Sbjct: 230 ISMQMGGDLGQVYR 243


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
          receptor protein.
          Length = 933

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 82 VFQGGSVTHGAGHSESI 32
          ++ GGS    AG SES+
Sbjct: 35 IYSGGSDWRVAGRSESV 51


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +1

Query: 82  PPQGRHRPEESARRLQHQLSP 144
           PP      EE  ++ +  LSP
Sbjct: 530 PPSSMKETEEEKKKTKQSLSP 550


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 262 HRDSGEXPLPGQD 300
           H D GE  +PG D
Sbjct: 140 HTDQGEEFVPGDD 152


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 211 LGLLSGNVFSRRK 173
           +GLLSG +  R+K
Sbjct: 131 MGLLSGGIILRKK 143


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,231
Number of Sequences: 438
Number of extensions: 1902
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7812315
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)