Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS330C05f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive elemen... 130 3e-30
M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein. 130 3e-30
M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-bindi... 130 3e-30
L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens db... 130 3e-30
BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1... 130 3e-30
BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1... 130 3e-30
BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1... 130 3e-30
BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein. 130 3e-30
BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1... 130 3e-30
BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1... 130 3e-30
BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1... 130 3e-30
BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1... 130 3e-30
BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for IM... 130 3e-30
BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1... 130 3e-30
BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1... 130 3e-30
BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1... 130 3e-30
BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein. 130 3e-30
J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein. 130 4e-30
X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein. 129 5e-30
X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein... 129 5e-30
M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-bindi... 129 5e-30
L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A pro... 129 5e-30
BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain prote... 129 5e-30
BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein. 129 5e-30
BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain prote... 129 5e-30
BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain prote... 129 5e-30
AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant pr... 129 5e-30
BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein. 128 1e-29
BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2... 126 4e-29
BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2... 126 4e-29
AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-bo... 126 4e-29
DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein. 122 8e-28
AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-bo... 67 4e-11
BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein. 52 1e-06
AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C. ele... 52 1e-06
AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens ... 52 1e-06
AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN... 52 1e-06
Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C. eleg... 52 2e-06
DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein. 52 2e-06
BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for IM... 52 2e-06
BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for IM... 52 2e-06
BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein. 52 2e-06
BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein. 52 2e-06
BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein. 52 2e-06
AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C. el... 52 2e-06
AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens ... 52 2e-06
AF417846-1|AAM46639.1| 143|Homo sapiens immunoglobulin heavy ch... 31 2.4
X58907-1|CAA41710.1| 369|Homo sapiens steroid 21-monooxygenase ... 31 3.2
CR456457-1|CAG30343.1| 153|Homo sapiens dJ347H13.2 protein. 31 3.2
BC067113-1|AAH67113.1| 153|Homo sapiens CSDC2 protein protein. 31 3.2
AL049712-6|CAI22420.2| 906|Homo sapiens transmembrane channel-l... 31 3.2
AL023553-5|CAB46024.1| 153|Homo sapiens protein ( hondrial acon... 31 3.2
AF417580-1|AAL86401.2| 906|Homo sapiens transmembrane channel-l... 31 3.2
AB027011-1|BAA84704.1| 153|Homo sapiens RNA-binding protein PIP... 31 3.2
X58899-1|CAA41703.1| 368|Homo sapiens steroid 21-monooxygenase ... 29 9.9
>M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive element
binding protein-1 protein.
Length = 322
Score = 130 bits (314), Expect = 3e-30
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 53 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 112
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 113 VEGEKGAEAANVTG 126
Score = 37.1 bits (82), Expect = 0.037
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GPGG PV+GS YAAD R ++R+Y PR+
Sbjct: 115 GEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRR 150
>M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein.
Length = 320
Score = 130 bits (314), Expect = 3e-30
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 51 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 110
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 111 VEGEKGAEAANVTG 124
Score = 37.1 bits (82), Expect = 0.037
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GPGG PV+GS YAAD R ++R+Y PR+
Sbjct: 113 GEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRR 148
>M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-binding
protein B (dbpB) gene, 3' end. ).
Length = 364
Score = 130 bits (314), Expect = 3e-30
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 94 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 153
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 154 VEGEKGAEAANVTG 167
Score = 37.1 bits (82), Expect = 0.037
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GPGG PV+GS YAAD R ++R+Y PR+
Sbjct: 156 GEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRR 191
>L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens
dbpB-like protein mRNA, complete cds. ).
Length = 324
Score = 130 bits (314), Expect = 3e-30
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 114 VEGEKGAEAANVTG 127
Score = 37.1 bits (82), Expect = 0.037
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GPGG PV+GS YAAD R ++R+Y PR+
Sbjct: 116 GEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRR 151
>BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 130 bits (314), Expect = 3e-30
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 114 VEGEKGAEAANVTG 127
Score = 37.1 bits (82), Expect = 0.037
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GPGG PV+GS YAAD R ++R+Y PR+
Sbjct: 116 GEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRR 151
>BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 130 bits (314), Expect = 3e-30
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 114 VEGEKGAEAANVTG 127
Score = 37.1 bits (82), Expect = 0.037
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GPGG PV+GS YAAD R ++R+Y PR+
Sbjct: 116 GEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRR 151
>BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 130 bits (314), Expect = 3e-30
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 114 VEGEKGAEAANVTG 127
Score = 37.1 bits (82), Expect = 0.037
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GPGG PV+GS YAAD R ++R+Y PR+
Sbjct: 116 GEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRR 151
>BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 130 bits (314), Expect = 3e-30
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 114 VEGEKGAEAANVTG 127
Score = 37.1 bits (82), Expect = 0.037
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GPGG PV+GS YAAD R ++R+Y PR+
Sbjct: 116 GEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRR 151
>BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 130 bits (314), Expect = 3e-30
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 114 VEGEKGAEAANVTG 127
Score = 37.1 bits (82), Expect = 0.037
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GPGG PV+GS YAAD R ++R+Y PR+
Sbjct: 116 GEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRR 151
>BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 130 bits (314), Expect = 3e-30
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 114 VEGEKGAEAANVTG 127
Score = 37.1 bits (82), Expect = 0.037
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GPGG PV+GS YAAD R ++R+Y PR+
Sbjct: 116 GEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRR 151
>BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 130 bits (314), Expect = 3e-30
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 114 VEGEKGAEAANVTG 127
Score = 37.1 bits (82), Expect = 0.037
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GPGG PV+GS YAAD R ++R+Y PR+
Sbjct: 116 GEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRR 151
>BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 130 bits (314), Expect = 3e-30
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 114 VEGEKGAEAANVTG 127
Score = 37.1 bits (82), Expect = 0.037
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GPGG PV+GS YAAD R ++R+Y PR+
Sbjct: 116 GEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRR 151
>BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for
IMAGE:3882730) protein.
Length = 267
Score = 130 bits (314), Expect = 3e-30
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 114 VEGEKGAEAANVTG 127
Score = 37.1 bits (82), Expect = 0.037
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GPGG PV+GS YAAD R ++R+Y PR+
Sbjct: 116 GEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRR 151
>BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 130 bits (314), Expect = 3e-30
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 114 VEGEKGAEAANVTG 127
Score = 37.1 bits (82), Expect = 0.037
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GPGG PV+GS YAAD R ++R+Y PR+
Sbjct: 116 GEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRR 151
>BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 130 bits (314), Expect = 3e-30
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 114 VEGEKGAEAANVTG 127
Score = 37.1 bits (82), Expect = 0.037
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GPGG PV+GS YAAD R ++R+Y PR+
Sbjct: 116 GEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRR 151
>BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 130 bits (314), Expect = 3e-30
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 114 VEGEKGAEAANVTG 127
Score = 37.1 bits (82), Expect = 0.037
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GPGG PV+GS YAAD R ++R+Y PR+
Sbjct: 116 GEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRR 151
>BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 130 bits (314), Expect = 3e-30
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 114 VEGEKGAEAANVTG 127
Score = 37.1 bits (82), Expect = 0.037
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GPGG PV+GS YAAD R ++R+Y PR+
Sbjct: 116 GEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRR 151
>J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein.
Length = 317
Score = 130 bits (313), Expect = 4e-30
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 114 VEGEKGEEAANVTG 127
Score = 36.3 bits (80), Expect = 0.065
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GPGG PV+GS YAAD R ++R+Y PR+
Sbjct: 116 GEKGEEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRR 151
>X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein.
Length = 372
Score = 129 bits (312), Expect = 5e-30
Identities = 60/74 (81%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 146 VEGEKGAEAANVTG 159
Score = 39.5 bits (88), Expect = 0.007
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GP G PV+GS YAAD+RR Y R Y+ R+
Sbjct: 148 GEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRR 185
>X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein A
protein.
Length = 372
Score = 129 bits (312), Expect = 5e-30
Identities = 60/74 (81%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 146 VEGEKGAEAANVTG 159
Score = 39.5 bits (88), Expect = 0.007
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GP G PV+GS YAAD+RR Y R Y+ R+
Sbjct: 148 GEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRR 185
>M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-binding
protein A (dbpA) gene, 3' end. ).
Length = 412
Score = 129 bits (312), Expect = 5e-30
Identities = 60/74 (81%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 156 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 215
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 216 VEGEKGAEAANVTG 229
Score = 39.5 bits (88), Expect = 0.007
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GP G PV+GS YAAD+RR Y R Y+ R+
Sbjct: 218 GEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRR 255
>L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A
protein.
Length = 342
Score = 129 bits (312), Expect = 5e-30
Identities = 60/74 (81%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 146 VEGEKGAEAANVTG 159
Score = 39.5 bits (88), Expect = 0.007
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GP G PV+GS YAAD+RR Y R Y+ R+
Sbjct: 148 GEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRR 185
>BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 129 bits (312), Expect = 5e-30
Identities = 60/74 (81%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 146 VEGEKGAEAANVTG 159
Score = 39.5 bits (88), Expect = 0.007
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GP G PV+GS YAAD+RR Y R Y+ R+
Sbjct: 148 GEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRR 185
>BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 129 bits (312), Expect = 5e-30
Identities = 60/74 (81%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 146 VEGEKGAEAANVTG 159
Score = 39.5 bits (88), Expect = 0.007
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GP G PV+GS YAAD+RR Y R Y+ R+
Sbjct: 148 GEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRR 185
>BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 129 bits (312), Expect = 5e-30
Identities = 60/74 (81%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 146 VEGEKGAEAANVTG 159
Score = 39.5 bits (88), Expect = 0.007
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GP G PV+GS YAAD+RR Y R Y+ R+
Sbjct: 148 GEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRR 185
>BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 129 bits (312), Expect = 5e-30
Identities = 60/74 (81%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 146 VEGEKGAEAANVTG 159
Score = 39.5 bits (88), Expect = 0.007
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GP G PV+GS YAAD+RR Y R Y+ R+
Sbjct: 148 GEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRR 185
>AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant
protein.
Length = 134
Score = 129 bits (312), Expect = 5e-30
Identities = 60/74 (81%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 19 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 78
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 79 VEGEKGAEAANVTG 92
Score = 39.5 bits (88), Expect = 0.007
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GP G PV+GS YAAD+RR Y R Y+ R+
Sbjct: 81 GEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRR 118
>BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 128 bits (309), Expect = 1e-29
Identities = 59/74 (79%), Positives = 65/74 (87%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RS+GDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSLGDGETVEFDV 145
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EAA VTG
Sbjct: 146 VEGEKGAEAANVTG 159
Score = 39.5 bits (88), Expect = 0.007
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
G K + + GP G PV+GS YAAD+RR Y R Y+ R+
Sbjct: 148 GEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRR 185
>BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 126 bits (305), Expect = 4e-29
Identities = 59/74 (79%), Positives = 64/74 (86%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EA VTG
Sbjct: 149 VEGEKGAEATNVTG 162
Score = 36.7 bits (81), Expect = 0.049
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPR 489
G K + + GPGG PVKGS YA ++R+ R++ PR
Sbjct: 151 GEKGAEATNVTGPGGVPVKGSRYAPNRRKS--RRFIPR 186
>BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 126 bits (305), Expect = 4e-29
Identities = 59/74 (79%), Positives = 64/74 (86%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EA VTG
Sbjct: 149 VEGEKGAEATNVTG 162
Score = 36.7 bits (81), Expect = 0.049
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPR 489
G K + + GPGG PVKGS YA ++R+ R++ PR
Sbjct: 151 GEKGAEATNVTGPGGVPVKGSRYAPNRRKS--RRFIPR 186
>AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-box
binding protein protein.
Length = 364
Score = 126 bits (305), Expect = 4e-29
Identities = 59/74 (79%), Positives = 64/74 (86%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 369 VAGEKGFEAAGVTG 410
V GEKG EA VTG
Sbjct: 149 VEGEKGAEATNVTG 162
Score = 36.7 bits (81), Expect = 0.049
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPR 489
G K + + GPGG PVKGS YA ++R+ R++ PR
Sbjct: 151 GEKGAEATNVTGPGGVPVKGSRYAPNRRKS--RRFIPR 186
>DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein.
Length = 319
Score = 122 bits (294), Expect = 8e-28
Identities = 57/74 (77%), Positives = 63/74 (85%)
Frame = +3
Query: 189 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 368
VIA KV GTVKWFNV++GYGFI+RNDTKEDVFVH TA +NNPRK +RSVGDGE VEF V
Sbjct: 50 VIATKVLGTVKWFNVRNGYGFIHRNDTKEDVFVHHTAXKKNNPRKYLRSVGDGEXVEFDV 109
Query: 369 VAGEKGFEAAGVTG 410
V GEKG +AA VTG
Sbjct: 110 VEGEKGAKAANVTG 123
Score = 38.3 bits (85), Expect = 0.016
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPR 489
G K K + GPGG PV+GS YAAD R ++R+Y PR
Sbjct: 112 GEKGAKAANVTGPGGVPVQGSKYAAD--RNHYRRY-PR 146
>AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-box
binding protein variant protein.
Length = 268
Score = 66.9 bits (156), Expect = 4e-11
Identities = 32/44 (72%), Positives = 35/44 (79%)
Frame = +3
Query: 279 VFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTG 410
+F +QTAI RNNPRK +RSVGDGE VEF VV GEKG EA VTG
Sbjct: 23 LFPNQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTG 66
Score = 36.7 bits (81), Expect = 0.049
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +1
Query: 376 GRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPR 489
G K + + GPGG PVKGS YA ++R+ R++ PR
Sbjct: 55 GEKGAEATNVTGPGGVPVKGSRYAPNRRKS--RRFIPR 90
>BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein.
Length = 209
Score = 52.0 bits (119), Expect = 1e-06
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Frame = +3
Query: 207 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 365
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 366 VVAGEKGFEAAGVTG 410
KG E+ VTG
Sbjct: 97 FKKSAKGLESIRVTG 111
>AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C.
elegans) protein.
Length = 209
Score = 52.0 bits (119), Expect = 1e-06
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Frame = +3
Query: 207 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 365
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 366 VVAGEKGFEAAGVTG 410
KG E+ VTG
Sbjct: 97 FKKSAKGLESIRVTG 111
>AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12457 fis, clone NT2RM1000666, weakly similar to
DNA-BINDING PROTEIN A. ).
Length = 209
Score = 52.0 bits (119), Expect = 1e-06
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Frame = +3
Query: 207 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 365
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 366 VVAGEKGFEAAGVTG 410
KG E+ VTG
Sbjct: 97 FKKSAKGLESIRVTG 111
>AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN-28
protein.
Length = 209
Score = 52.0 bits (119), Expect = 1e-06
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Frame = +3
Query: 207 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 365
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 366 VVAGEKGFEAAGVTG 410
KG E+ VTG
Sbjct: 97 FKKSAKGLESIRVTG 111
>Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 51.6 bits (118), Expect = 2e-06
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Frame = +3
Query: 207 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 365
+G KWFNV+ G+GF INR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLF----MEGFRSLKEGEPVEFT 86
Query: 366 VVAGEKGFEAAGVTG 410
KG E+ VTG
Sbjct: 87 FKKSSKGLESIRVTG 101
>DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein.
Length = 250
Score = 51.6 bits (118), Expect = 2e-06
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Frame = +3
Query: 207 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 365
+G KWFNV+ G+GF INR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLF----MEGFRSLKEGEPVEFT 86
Query: 366 VVAGEKGFEAAGVTG 410
KG E+ VTG
Sbjct: 87 FKKSSKGLESIRVTG 101
>BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127315) protein.
Length = 227
Score = 51.6 bits (118), Expect = 2e-06
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Frame = +3
Query: 207 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 365
+G KWFNV+ G+GF INR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLF----MEGFRSLKEGEPVEFT 63
Query: 366 VVAGEKGFEAAGVTG 410
KG E+ VTG
Sbjct: 64 FKKSSKGLESIRVTG 78
>BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127314) protein.
Length = 227
Score = 51.6 bits (118), Expect = 2e-06
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Frame = +3
Query: 207 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 365
+G KWFNV+ G+GF INR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLF----MEGFRSLKEGEPVEFT 63
Query: 366 VVAGEKGFEAAGVTG 410
KG E+ VTG
Sbjct: 64 FKKSSKGLESIRVTG 78
>BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 51.6 bits (118), Expect = 2e-06
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Frame = +3
Query: 207 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 365
+G KWFNV+ G+GF INR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLF----MEGFRSLKEGEPVEFT 63
Query: 366 VVAGEKGFEAAGVTG 410
KG E+ VTG
Sbjct: 64 FKKSSKGLESIRVTG 78
>BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 51.6 bits (118), Expect = 2e-06
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Frame = +3
Query: 207 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 365
+G KWFNV+ G+GF INR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLF----MEGFRSLKEGEPVEFT 63
Query: 366 VVAGEKGFEAAGVTG 410
KG E+ VTG
Sbjct: 64 FKKSSKGLESIRVTG 78
>BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 51.6 bits (118), Expect = 2e-06
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Frame = +3
Query: 207 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 365
+G KWFNV+ G+GF INR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLF----MEGFRSLKEGEPVEFT 63
Query: 366 VVAGEKGFEAAGVTG 410
KG E+ VTG
Sbjct: 64 FKKSSKGLESIRVTG 78
>AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 51.6 bits (118), Expect = 2e-06
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Frame = +3
Query: 207 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 365
+G KWFNV+ G+GF INR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLF----MEGFRSLKEGEPVEFT 86
Query: 366 VVAGEKGFEAAGVTG 410
KG E+ VTG
Sbjct: 87 FKKSSKGLESIRVTG 101
>AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ16517 fis, clone NT2RI3007167. ).
Length = 250
Score = 51.6 bits (118), Expect = 2e-06
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Frame = +3
Query: 207 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 365
+G KWFNV+ G+GF INR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLF----MEGFRSLKEGEPVEFT 86
Query: 366 VVAGEKGFEAAGVTG 410
KG E+ VTG
Sbjct: 87 FKKSSKGLESIRVTG 101
>AF417846-1|AAM46639.1| 143|Homo sapiens immunoglobulin heavy chain
protein.
Length = 143
Score = 31.1 bits (67), Expect = 2.4
Identities = 21/48 (43%), Positives = 22/48 (45%)
Frame = +1
Query: 235 RVDMVSSTGMTPRKMCLCIRLPSPVTTHVRLCARSATERRWSLPWLPG 378
RV M S T +T M L L S T V CAR R W PW PG
Sbjct: 86 RVAMTSDTSVTTAYMELT-SLTSDDTA-VYFCARGDVNRNWLDPWGPG 131
>X58907-1|CAA41710.1| 369|Homo sapiens steroid 21-monooxygenase
protein.
Length = 369
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 298 PSPVTTHVRLCARSATERRWSLPWLPGRKALKQLVLLG 411
P P+TT C R+ RWSL W +K + +LLG
Sbjct: 92 PEPLTTS--WCLRTTRTCRWSLLWKAHKKLTRSALLLG 127
>CR456457-1|CAG30343.1| 153|Homo sapiens dJ347H13.2 protein.
Length = 153
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 210 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 302
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>BC067113-1|AAH67113.1| 153|Homo sapiens CSDC2 protein protein.
Length = 153
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 210 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 302
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>AL049712-6|CAI22420.2| 906|Homo sapiens transmembrane channel-like
2 protein.
Length = 906
Score = 30.7 bits (66), Expect = 3.2
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +1
Query: 322 RLCARSATERRWSLPWLPGRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
RL RS+++R PGR+ ++ GG P GSP R HR+ Q
Sbjct: 30 RLGRRSSSKRALKAEGTPGRRGAQRSQKERAGGSPSPGSPRRKQTGRRRHREELGEQ 86
>AL023553-5|CAB46024.1| 153|Homo sapiens protein ( hondrial
aconitase 2, the gene Statin S).).
Length = 153
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 210 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 302
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>AF417580-1|AAL86401.2| 906|Homo sapiens transmembrane channel-like
protein 2 protein.
Length = 906
Score = 30.7 bits (66), Expect = 3.2
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +1
Query: 322 RLCARSATERRWSLPWLPGRKALKQLVLLGPGGEPVKGSPYAADKRRGYHRQYFPRQ 492
RL RS+++R PGR+ ++ GG P GSP R HR+ Q
Sbjct: 30 RLGRRSSSKRALKAEGTPGRRGAQRSQKERAGGSPSPGSPRRKQTGRRRHREELGEQ 86
>AB027011-1|BAA84704.1| 153|Homo sapiens RNA-binding protein PIPPin
protein.
Length = 153
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 210 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 302
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>X58899-1|CAA41703.1| 368|Homo sapiens steroid 21-monooxygenase
protein.
Length = 368
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 298 PSPVTTHVRLCARSATERRWSLPWLPGRKALKQLVLLG 411
P P+T+ C R+ RWSL W +K + +LLG
Sbjct: 92 PEPLTSS--WCLRTTRTCRWSLLWKAHKKLTRSALLLG 127
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,084,469
Number of Sequences: 237096
Number of extensions: 1309767
Number of successful extensions: 3878
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 3695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3865
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -