Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS330C01f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q74JI1 Cluster: Putative uncharacterized protein; n=4; ...    35   0.98 
UniRef50_Q4XFT7 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  

>UniRef50_Q74JI1 Cluster: Putative uncharacterized protein; n=4;
           Bacteria|Rep: Putative uncharacterized protein -
           Lactobacillus johnsonii
          Length = 137

 Score = 35.1 bits (77), Expect = 0.98
 Identities = 17/34 (50%), Positives = 22/34 (64%)
 Frame = +1

Query: 349 SINFHDINVQNVSSNPHSQL*TAFRIGGSHDFFK 450
           +INFH I++QNV+ N  S L  AF  GG+   FK
Sbjct: 33  TINFHTISIQNVNKNILSSLLLAFIAGGTSAVFK 66


>UniRef50_Q4XFT7 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 196

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
 Frame = +2

Query: 17  TLPFHHGIHN---FSLFYHHPVILLYPFHNPIY 106
           T  +H G HN   + L YHHP      FH+P Y
Sbjct: 20  TFDYHLGFHNPFDYHLVYHHPFYYHLIFHHPFY 52


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 465,858,305
Number of Sequences: 1657284
Number of extensions: 8099328
Number of successful extensions: 15757
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15739
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)