Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS330C01f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   3.8  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   6.6  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   6.6  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   6.6  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   8.7  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 178 VTYAWLNYIN 149
           V++ WLNYIN
Sbjct: 402 VSHKWLNYIN 411


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = +3

Query: 192 HNFN*HINCELQQRSFATNEPWYRS 266
           HNFN H+N          +  W +S
Sbjct: 399 HNFNRHLNSNRAPLGLHFHASWLKS 423


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = +3

Query: 192 HNFN*HINCELQQRSFATNEPWYRS 266
           HNFN H+N          +  W +S
Sbjct: 406 HNFNRHLNSNRAPLGLHFHASWLKS 430


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 442 SHDYHRFGMQFTAENVGYY 386
           ++D+H     FTAEN   Y
Sbjct: 201 TYDFHAMWAGFTAENSPLY 219


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 265 HSFATYKLFSTLIQ 306
           HS ATY LF  L++
Sbjct: 3   HSLATYLLFLALLK 16


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,301
Number of Sequences: 336
Number of extensions: 2378
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)