Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS330B11f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0428 + 3055163-3055573 57 1e-08
06_01_0427 - 3054204-3054614 57 1e-08
06_01_0425 - 3045557-3046004,3046852-3046856 57 1e-08
06_01_0423 - 3039527-3039937 57 1e-08
06_01_0217 - 1644696-1645034,1645143-1645214 57 1e-08
05_04_0449 - 21355439-21355849 57 1e-08
04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392 57 1e-08
04_03_0909 + 20748653-20749063 57 1e-08
03_03_0212 + 15479850-15479921,15479965-15480083,15480175-154802... 57 1e-08
01_06_1456 + 37507156-37507566 57 1e-08
12_02_0048 - 12852335-12852745 54 7e-08
11_01_0348 - 2607315-2607424,2608634-2609030 51 5e-07
02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596 50 9e-07
02_03_0107 - 15303890-15304060,15304158-15304248,15304505-153046... 50 9e-07
12_02_0047 - 12836779-12837189 48 5e-06
05_05_0297 - 23921648-23921758,23922011-23922089,23922774-239228... 46 2e-05
01_06_0746 - 31636024-31641396 24 4.2
>06_01_0428 + 3055163-3055573
Length = 136
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = -2
Query: 520 CAIHAKRVTIMPKDIQLARRIRGERA 443
CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHAKRVTIMPKDIQLARRIRGERA 136
>06_01_0427 - 3054204-3054614
Length = 136
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = -2
Query: 520 CAIHAKRVTIMPKDIQLARRIRGERA 443
CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHAKRVTIMPKDIQLARRIRGERA 136
>06_01_0425 - 3045557-3046004,3046852-3046856
Length = 150
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = -2
Query: 520 CAIHAKRVTIMPKDIQLARRIRGERA 443
CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 125 CAIHAKRVTIMPKDIQLARRIRGERA 150
>06_01_0423 - 3039527-3039937
Length = 136
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = -2
Query: 520 CAIHAKRVTIMPKDIQLARRIRGERA 443
CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHAKRVTIMPKDIQLARRIRGERA 136
>06_01_0217 - 1644696-1645034,1645143-1645214
Length = 136
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = -2
Query: 520 CAIHAKRVTIMPKDIQLARRIRGERA 443
CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHAKRVTIMPKDIQLARRIRGERA 136
>05_04_0449 - 21355439-21355849
Length = 136
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = -2
Query: 520 CAIHAKRVTIMPKDIQLARRIRGERA 443
CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHAKRVTIMPKDIQLARRIRGERA 136
>04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392
Length = 106
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = -2
Query: 520 CAIHAKRVTIMPKDIQLARRIRGERA 443
CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 81 CAIHAKRVTIMPKDIQLARRIRGERA 106
>04_03_0909 + 20748653-20749063
Length = 136
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = -2
Query: 520 CAIHAKRVTIMPKDIQLARRIRGERA 443
CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHAKRVTIMPKDIQLARRIRGERA 136
>03_03_0212 +
15479850-15479921,15479965-15480083,15480175-15480265,
15480363-15480533
Length = 150
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = -2
Query: 520 CAIHAKRVTIMPKDIQLARRIRGERA 443
CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 125 CAIHAKRVTIMPKDIQLARRIRGERA 150
>01_06_1456 + 37507156-37507566
Length = 136
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = -2
Query: 520 CAIHAKRVTIMPKDIQLARRIRGERA 443
CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHAKRVTIMPKDIQLARRIRGERA 136
>12_02_0048 - 12852335-12852745
Length = 136
Score = 54.0 bits (124), Expect = 7e-08
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = -2
Query: 520 CAIHAKRVTIMPKDIQLARRIRGERA 443
C IHAKRVTIMPKDIQLARRIRGE+A
Sbjct: 111 CVIHAKRVTIMPKDIQLARRIRGEKA 136
>11_01_0348 - 2607315-2607424,2608634-2609030
Length = 168
Score = 51.2 bits (117), Expect = 5e-07
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = -2
Query: 520 CAIHAKRVTIMPKDIQLARRIRG 452
CAIHAKRVTIMPKDIQLARRIRG
Sbjct: 111 CAIHAKRVTIMPKDIQLARRIRG 133
>02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596
Length = 115
Score = 50.4 bits (115), Expect = 9e-07
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = -2
Query: 520 CAIHAKRVTIMPKDIQLARRIRGER 446
CAIH+KRVTIM KD+QLARRIRGER
Sbjct: 90 CAIHSKRVTIMSKDVQLARRIRGER 114
>02_03_0107 -
15303890-15304060,15304158-15304248,15304505-15304614,
15304715-15304784,15306365-15306558
Length = 211
Score = 50.4 bits (115), Expect = 9e-07
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = -2
Query: 520 CAIHAKRVTIMPKDIQLARRIRGER 446
CAIH+KRVTIM KD+QLARRIRGER
Sbjct: 186 CAIHSKRVTIMSKDVQLARRIRGER 210
>12_02_0047 - 12836779-12837189
Length = 136
Score = 48.0 bits (109), Expect = 5e-06
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = -2
Query: 520 CAIHAKRVTIMPKDIQLARRIRGERA 443
C IHAKRVTIMPKDIQLAR I GE+A
Sbjct: 111 CVIHAKRVTIMPKDIQLARCIGGEKA 136
>05_05_0297 -
23921648-23921758,23922011-23922089,23922774-23922822,
23923180-23923255,23923693-23923767,23923862-23923992,
23924830-23924935
Length = 208
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = -2
Query: 520 CAIHAKRVTIMPKDIQLARRIRGER 446
CAIHAKRVTIM KD+QLARRI G R
Sbjct: 120 CAIHAKRVTIMQKDMQLARRIGGRR 144
>01_06_0746 - 31636024-31641396
Length = 1790
Score = 23.8 bits (49), Expect(2) = 4.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 301 YATMKYENDVFHQNSVIGLLAKPR 230
+ +++YENDV+ N GL +PR
Sbjct: 1035 FGSVQYENDVYPMNG--GLSQRPR 1056
Score = 22.6 bits (46), Expect(2) = 4.2
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = -2
Query: 232 RYGHVILCKVH*SQKKPMD 176
+Y +V+ C+++ +QKK D
Sbjct: 1081 KYTYVVACQIYGNQKKAKD 1099
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,956,455
Number of Sequences: 37544
Number of extensions: 172820
Number of successful extensions: 318
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 316
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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