Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS330B10f
(379 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 33 0.051
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 33 0.051
Z81044-6|CAB02806.1| 360|Caenorhabditis elegans Hypothetical pr... 31 0.27
Z68105-3|CAA92121.2| 442|Caenorhabditis elegans Hypothetical pr... 30 0.63
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 29 1.1
Z81547-1|CAB04459.1| 354|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z46794-10|CAH04745.1| 417|Caenorhabditis elegans Hypothetical p... 28 1.9
Z77655-6|CAB01139.1| 351|Caenorhabditis elegans Hypothetical pr... 28 2.5
U75587-1|AAB48299.1| 351|Caenorhabditis elegans caveolin-2 prot... 28 2.5
AF162674-1|AAF80462.1| 575|Caenorhabditis elegans CNT-like nucl... 28 2.5
AF024492-6|AAF98616.1| 277|Caenorhabditis elegans Hypothetical ... 28 2.5
AF016413-4|AAM29683.1| 454|Caenorhabditis elegans Hypothetical ... 28 2.5
AF016413-3|AAB65256.3| 555|Caenorhabditis elegans Hypothetical ... 28 2.5
Z81077-9|CAD56582.1| 565|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z81077-8|CAB03072.2| 528|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z72504-1|CAA96603.2| 1193|Caenorhabditis elegans Hypothetical pr... 27 3.4
U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-li... 27 3.4
EF535106-1|ABQ15208.1| 1206|Caenorhabditis elegans transient rec... 27 3.4
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 27 3.4
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 27 3.4
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 27 3.4
AF099916-2|AAC68776.1| 1145|Caenorhabditis elegans Hypothetical ... 27 3.4
AF078157-2|AAN84818.1| 176|Caenorhabditis elegans Hypothetical ... 27 3.4
AF078157-1|AAG24071.1| 235|Caenorhabditis elegans Hypothetical ... 27 3.4
U42843-3|AAM75365.1| 310|Caenorhabditis elegans Skinhead protei... 27 4.5
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 23 5.0
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z81526-5|CAB04262.1| 983|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z81475-8|CAL90887.1| 676|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z81475-7|CAB03914.2| 653|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z48783-4|CAA88698.1| 359|Caenorhabditis elegans Hypothetical pr... 27 5.9
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr... 27 5.9
U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z92829-9|CAB07349.1| 360|Caenorhabditis elegans Hypothetical pr... 26 7.8
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 26 7.8
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 26 7.8
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 26 7.8
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 26 7.8
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 26 7.8
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 26 7.8
Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical pr... 26 7.8
Z68108-6|CAF31486.1| 537|Caenorhabditis elegans Hypothetical pr... 26 7.8
U97194-4|AAP13781.1| 521|Caenorhabditis elegans Cyclin e protei... 26 7.8
U97194-3|AAK68235.1| 524|Caenorhabditis elegans Cyclin e protei... 26 7.8
U50309-1|AAG24137.1| 335|Caenorhabditis elegans Seven tm recept... 26 7.8
AY390551-1|AAQ94963.1| 926|Caenorhabditis elegans SMA-9 class I... 26 7.8
AY390550-1|AAQ94962.1| 537|Caenorhabditis elegans SMA-9 class I... 26 7.8
AY390549-1|AAQ94961.1| 411|Caenorhabditis elegans SMA-9 class I... 26 7.8
AY390548-1|AAQ94960.1| 352|Caenorhabditis elegans SMA-9 class I... 26 7.8
AY390547-1|AAQ94959.1| 337|Caenorhabditis elegans SMA-9 class I... 26 7.8
AY390545-1|AAQ94957.1| 792|Caenorhabditis elegans SMA-9 class I... 26 7.8
AY390542-1|AAQ94954.1| 468|Caenorhabditis elegans SMA-9 class I... 26 7.8
AY390538-1|AAQ94950.1| 591|Caenorhabditis elegans SMA-9 class I... 26 7.8
AF520616-1|AAM78547.1| 524|Caenorhabditis elegans cyclin E prot... 26 7.8
AF058331-1|AAC63505.1| 524|Caenorhabditis elegans cyclin E prot... 26 7.8
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical
protein F29G6.3c protein.
Length = 1453
Score = 33.5 bits (73), Expect = 0.051
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
Frame = +3
Query: 132 ESGHHHQ-----IEHEHAKSHQSIKFEHFHP-VPVYVKKEHSHLLKH---PLEKGKSEQN 284
ES HHH +E E KS + H+ P P VK + + +H PLEK +
Sbjct: 696 ESFHHHSFIPNSLEAER-KSRSVERAHHYLPDSPANVKDQRKIIREHHYVPLEKRSQSLD 754
Query: 285 LKLIHPE 305
LK++HPE
Sbjct: 755 LKVVHPE 761
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical
protein F29G6.3b protein.
Length = 1785
Score = 33.5 bits (73), Expect = 0.051
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
Frame = +3
Query: 132 ESGHHHQ-----IEHEHAKSHQSIKFEHFHP-VPVYVKKEHSHLLKH---PLEKGKSEQN 284
ES HHH +E E KS + H+ P P VK + + +H PLEK +
Sbjct: 696 ESFHHHSFIPNSLEAER-KSRSVERAHHYLPDSPANVKDQRKIIREHHYVPLEKRSQSLD 754
Query: 285 LKLIHPE 305
LK++HPE
Sbjct: 755 LKVVHPE 761
>Z81044-6|CAB02806.1| 360|Caenorhabditis elegans Hypothetical
protein C30H6.2 protein.
Length = 360
Score = 31.1 bits (67), Expect = 0.27
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +3
Query: 27 HIFLGLIAAVTAFPGIIHDEAPQVEAKYDHQSLIGESGHHHQIEHEHAKSHQSIK 191
H FL + + + I+H PQV +DH GH+H HEH H ++
Sbjct: 46 HFFLAMAVSTLSSDAILHI-IPQVVGVHDH-------GHNHGHSHEHHHEHTDLE 92
>Z68105-3|CAA92121.2| 442|Caenorhabditis elegans Hypothetical
protein F13E6.4 protein.
Length = 442
Score = 29.9 bits (64), Expect = 0.63
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Frame = +3
Query: 144 HHQIEHEHAKSHQSIKFE-HFHPVPVYVKK-------EHSHLLKHPLEKGKSEQN 284
HH + H+H+KS ++ + PVP +VK ++ L + P ++G +QN
Sbjct: 126 HHNVHHQHSKSVSALPMTIGYSPVPSHVKSVSHEANYSYAGLSEIPQQQGMMQQN 180
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 29.1 bits (62), Expect = 1.1
Identities = 26/89 (29%), Positives = 31/89 (34%), Gaps = 8/89 (8%)
Frame = +3
Query: 78 HDEAPQVEAKYDHQSLIGESGHH------HQIEHEHAKSHQSIKFEHFHPVPVYVKKEHS 239
H E A + H G GHH H EH HA +H EH H P + H
Sbjct: 429 HGEHHHAPAHHGHHESHGH-GHHSPAHHGHHGEHHHAPAHHGHHGEHHH-APAH----HG 482
Query: 240 HLLKHPLEKGKSEQNLKLIH--PETEHKH 320
H +H G + H EH H
Sbjct: 483 HHGEHGTHHGHHGSHHSPAHHGHHGEHHH 511
Score = 28.3 bits (60), Expect = 1.9
Identities = 21/84 (25%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
Frame = +3
Query: 78 HDEAPQVEAKY-DHQSLIGESGHH--HQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSHLL 248
H AP + +H GHH H H H SH S H + H H
Sbjct: 461 HHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHG 520
Query: 249 KHPLEKGKSEQNLKLIHPETEHKH 320
+H G ++ H H H
Sbjct: 521 EHGTHHGHHGEH---HHAPAHHGH 541
Score = 27.1 bits (57), Expect = 4.5
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +3
Query: 78 HDEAPQVEAKYDHQSLIGESG-HH-HQIEHEHAKSHQSIKFEH 200
H E A + H GE G HH H EH HA +H EH
Sbjct: 506 HGEHHHAPAHHGHH---GEHGTHHGHHGEHHHAPAHHGHHGEH 545
Score = 26.6 bits (56), Expect = 5.9
Identities = 22/81 (27%), Positives = 29/81 (35%)
Frame = +3
Query: 78 HDEAPQVEAKYDHQSLIGESGHHHQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSHLLKHP 257
H E + E ++H + E G HH+ EH +H S H EH H P
Sbjct: 381 HHEHKEGE-HHEHAAHHDEHGVHHRHHGEHHGTHHSPAHHGEHGTHHGHHGEHHHA---P 436
Query: 258 LEKGKSEQNLKLIHPETEHKH 320
G E + H H H
Sbjct: 437 AHHGHHESHGHGHHSPAHHGH 457
>Z81547-1|CAB04459.1| 354|Caenorhabditis elegans Hypothetical
protein F53F8.1 protein.
Length = 354
Score = 28.7 bits (61), Expect = 1.5
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = +3
Query: 90 PQVEAKYDHQSLIGESGHHHQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSH 242
P Y HQS + H H +H H +SH PV + V H H
Sbjct: 62 PSSSNGYYHQSQYQNAHHQHHQQHYHQQSHHHYNGAAAAPV-INVHNYHFH 111
>Z46794-10|CAH04745.1| 417|Caenorhabditis elegans Hypothetical
protein R06F6.12 protein.
Length = 417
Score = 28.3 bits (60), Expect = 1.9
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 84 EAPQVEAKYDHQSLIGESGHHHQIEHE 164
+A Q E +++ + +I + HHH + HE
Sbjct: 122 QAKQNEQEHNEEVVIEDGSHHHMVHHE 148
>Z77655-6|CAB01139.1| 351|Caenorhabditis elegans Hypothetical
protein C56A3.7 protein.
Length = 351
Score = 27.9 bits (59), Expect = 2.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 132 ESGHHHQIEHEHAKSHQSI 188
E HHH HEH HQ I
Sbjct: 36 EDHHHHHHHHEHHHQHQGI 54
>U75587-1|AAB48299.1| 351|Caenorhabditis elegans caveolin-2
protein.
Length = 351
Score = 27.9 bits (59), Expect = 2.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 132 ESGHHHQIEHEHAKSHQSI 188
E HHH HEH HQ I
Sbjct: 36 EDHHHHHHHHEHHHQHQGI 54
>AF162674-1|AAF80462.1| 575|Caenorhabditis elegans CNT-like
nucleoside transporter protein.
Length = 575
Score = 27.9 bits (59), Expect = 2.5
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -3
Query: 200 VFELDRLVRFGVFVFNLMMVSRFTNQRLVVVFRFDLGSFIMYY 72
+ +L RL F +VF ++ + F+N R+ + + + IM+Y
Sbjct: 141 IHDLTRLTGFFAYVFYILFMFVFSNNRMKINWSVVSSALIMHY 183
>AF024492-6|AAF98616.1| 277|Caenorhabditis elegans Hypothetical
protein F14F9.2 protein.
Length = 277
Score = 27.9 bits (59), Expect = 2.5
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 9/69 (13%)
Frame = +3
Query: 75 IHDEAPQV--EAKYDHQSLIGESGHHHQIEHEHAKSHQSIKFEHFHPV-------PVYVK 227
I EAP + EA + + E+ H E EH+ SH++ +H+ P PV ++
Sbjct: 198 IGSEAPFIGSEAPVESNTESEENSHEDSDEPEHSDSHEN---DHYSPPEIDSSDDPVLIR 254
Query: 228 KEHSHLLKH 254
K H KH
Sbjct: 255 KGHGKRGKH 263
>AF016413-4|AAM29683.1| 454|Caenorhabditis elegans Hypothetical
protein F27E11.2b protein.
Length = 454
Score = 27.9 bits (59), Expect = 2.5
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -3
Query: 200 VFELDRLVRFGVFVFNLMMVSRFTNQRLVVVFRFDLGSFIMYY 72
+ +L RL F +VF ++ + F+N R+ + + + IM+Y
Sbjct: 141 IHDLTRLTGFFAYVFYILFMFVFSNNRMKINWSVVSSALIMHY 183
>AF016413-3|AAB65256.3| 555|Caenorhabditis elegans Hypothetical
protein F27E11.2a protein.
Length = 555
Score = 27.9 bits (59), Expect = 2.5
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -3
Query: 200 VFELDRLVRFGVFVFNLMMVSRFTNQRLVVVFRFDLGSFIMYY 72
+ +L RL F +VF ++ + F+N R+ + + + IM+Y
Sbjct: 141 IHDLTRLTGFFAYVFYILFMFVFSNNRMKINWSVVSSALIMHY 183
>Z81077-9|CAD56582.1| 565|Caenorhabditis elegans Hypothetical
protein F36A2.9b protein.
Length = 565
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 111 DHQSLIGESGHHHQIEHEHAKSHQSIKFEHFHPV 212
D S I E ++H+H KS +IK E PV
Sbjct: 81 DDSSDISEERERDSVDHQHLKSLTAIKPEKHQPV 114
>Z81077-8|CAB03072.2| 528|Caenorhabditis elegans Hypothetical
protein F36A2.9a protein.
Length = 528
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 111 DHQSLIGESGHHHQIEHEHAKSHQSIKFEHFHPV 212
D S I E ++H+H KS +IK E PV
Sbjct: 81 DDSSDISEERERDSVDHQHLKSLTAIKPEKHQPV 114
>Z72504-1|CAA96603.2| 1193|Caenorhabditis elegans Hypothetical
protein C29E6.2 protein.
Length = 1193
Score = 27.5 bits (58), Expect = 3.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 201 FHPVPVYVKKEHSHLLKHPLEK 266
+HP+ + E HLL HPL K
Sbjct: 760 YHPLKLMADAEKLHLLNHPLSK 781
>U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-like
protein protein16 protein.
Length = 326
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 96 VEAKYDHQSLIGESGHHHQIEHEHAKSHQSIKFEH 200
V+ + HQ E H HQ EH + HQ+ EH
Sbjct: 162 VDEHHGHQKKNAEDHHEHQKRSEHVE-HQAEMHEH 195
>EF535106-1|ABQ15208.1| 1206|Caenorhabditis elegans transient
receptor potential subfamilyA-1 protein.
Length = 1206
Score = 27.5 bits (58), Expect = 3.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 201 FHPVPVYVKKEHSHLLKHPLEK 266
+HP+ + E HLL HPL K
Sbjct: 773 YHPLKLMADAEKLHLLNHPLSK 794
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform a
protein.
Length = 4488
Score = 27.5 bits (58), Expect = 3.4
Identities = 9/44 (20%), Positives = 21/44 (47%)
Frame = +3
Query: 117 QSLIGESGHHHQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSHLL 248
Q L HQ + + + Q +F HF+ +++++H + +
Sbjct: 196 QQLYQHQHQQHQQQQQQPQEQQQQRFHHFNQYQQHIREQHQNTM 239
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform d
protein.
Length = 4369
Score = 27.5 bits (58), Expect = 3.4
Identities = 9/44 (20%), Positives = 21/44 (47%)
Frame = +3
Query: 117 QSLIGESGHHHQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSHLL 248
Q L HQ + + + Q +F HF+ +++++H + +
Sbjct: 196 QQLYQHQHQQHQQQQQQPQEQQQQRFHHFNQYQQHIREQHQNTM 239
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform c
protein.
Length = 4447
Score = 27.5 bits (58), Expect = 3.4
Identities = 9/44 (20%), Positives = 21/44 (47%)
Frame = +3
Query: 117 QSLIGESGHHHQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSHLL 248
Q L HQ + + + Q +F HF+ +++++H + +
Sbjct: 196 QQLYQHQHQQHQQQQQQPQEQQQQRFHHFNQYQQHIREQHQNTM 239
>AF099916-2|AAC68776.1| 1145|Caenorhabditis elegans Hypothetical
protein F54C4.3 protein.
Length = 1145
Score = 27.5 bits (58), Expect = 3.4
Identities = 19/79 (24%), Positives = 30/79 (37%)
Frame = +3
Query: 84 EAPQVEAKYDHQSLIGESGHHHQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSHLLKHPLE 263
E P E Y+ E G H+ +E EH K H +++ E ++H H + P
Sbjct: 810 ELPDEEVIYETYEDYPEYGGHYDLEEEH-KMHHNMRLEEEE------LQQHLHEQQKPEH 862
Query: 264 KGKSEQNLKLIHPETEHKH 320
+ L + H H
Sbjct: 863 LSHQTEELGELQDHHHHHH 881
>AF078157-2|AAN84818.1| 176|Caenorhabditis elegans Hypothetical
protein F25E5.8b protein.
Length = 176
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +3
Query: 27 HIFLGLIAAVTAFPGIIHDEAPQVEAKYDHQSLIGESGHHHQIEHEHAKSH 179
H+ L++ + F +A + ++ S G SG H EH H + H
Sbjct: 5 HVIAELVSEFSGFQHTPDFKASRSTGNFEEGSEEGTSGSHKPEEHHHKEHH 55
>AF078157-1|AAG24071.1| 235|Caenorhabditis elegans Hypothetical
protein F25E5.8a protein.
Length = 235
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +3
Query: 27 HIFLGLIAAVTAFPGIIHDEAPQVEAKYDHQSLIGESGHHHQIEHEHAKSH 179
H+ L++ + F +A + ++ S G SG H EH H + H
Sbjct: 5 HVIAELVSEFSGFQHTPDFKASRSTGNFEEGSEEGTSGSHKPEEHHHKEHH 55
>U42843-3|AAM75365.1| 310|Caenorhabditis elegans Skinhead protein
1, isoform b protein.
Length = 310
Score = 27.1 bits (57), Expect = 4.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 114 HQSLIGESGHHHQIEHEHAKSHQSIKFEHFHPVPVY 221
+Q + + GHHHQ H +A S S F+ P Y
Sbjct: 50 NQQQVDQHGHHHQ--HPYAYSGVSSTFDRVFPTSNY 83
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 23.0 bits (47), Expect(2) = 5.0
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +3
Query: 129 GESGHHHQIEHEH 167
G S HHH H H
Sbjct: 673 GSSNHHHHHHHSH 685
Score = 22.2 bits (45), Expect(2) = 5.0
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 141 HHHQIEHEHAKS 176
HHH H HA S
Sbjct: 679 HHHHHSHHHASS 690
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 26.6 bits (56), Expect = 5.9
Identities = 12/41 (29%), Positives = 14/41 (34%)
Frame = +3
Query: 132 ESGHHHQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSHLLKH 254
+ GH H +H HA H H H H H H
Sbjct: 77 DHGHAHDHDHGHAHDHGHAHDHHGHSHDEEEDHHHGHAHDH 117
>Z81526-5|CAB04262.1| 983|Caenorhabditis elegans Hypothetical
protein F33H2.1 protein.
Length = 983
Score = 26.6 bits (56), Expect = 5.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 269 SLFKRVLEKVAVLLLHVHRNGVEVFELDRLV 177
S K EK L H+ RNG VF+++++V
Sbjct: 308 SAMKPRFEKALPLRDHLERNGTVVFDMEKIV 338
>Z81475-8|CAL90887.1| 676|Caenorhabditis elegans Hypothetical
protein C24H11.8b protein.
Length = 676
Score = 26.6 bits (56), Expect = 5.9
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 249 KHPLEKGKSEQNLKLIHPETEHKH 320
K + G S+QN + IHP H H
Sbjct: 650 KRTISSGSSKQNEEYIHPRKYHHH 673
>Z81475-7|CAB03914.2| 653|Caenorhabditis elegans Hypothetical
protein C24H11.8a protein.
Length = 653
Score = 26.6 bits (56), Expect = 5.9
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 249 KHPLEKGKSEQNLKLIHPETEHKH 320
K + G S+QN + IHP H H
Sbjct: 627 KRTISSGSSKQNEEYIHPRKYHHH 650
>Z48783-4|CAA88698.1| 359|Caenorhabditis elegans Hypothetical
protein F33H1.3 protein.
Length = 359
Score = 26.6 bits (56), Expect = 5.9
Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +3
Query: 141 HHHQIEHEHAKSHQS-IKFEHFH 206
HHH H HA SH + + F++ H
Sbjct: 247 HHHHHHHPHASSHYNPMGFQNHH 269
>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical protein
F42C5.10 protein.
Length = 1292
Score = 26.6 bits (56), Expect = 5.9
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 78 HDEAPQVEAKYDHQSLIGESGH-HHQIEHEHAKSHQSIKFEHFH 206
H + V+ + H S H HH + E+A H + + EH H
Sbjct: 939 HYDTVHVQHHHHHHYHTDGSEHVHHYHQDENAHQHSTAENEHIH 982
>U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical
protein F53A9.7 protein.
Length = 85
Score = 26.6 bits (56), Expect = 5.9
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +3
Query: 132 ESGHHHQIE-HEHAKSHQSIKFEHFHPVPVYVKKEHSH 242
+ GHH ++ H H +SH H V Y SH
Sbjct: 39 DGGHHGHVDTHHHEESHHGEHHGGHHGVQHYESHHESH 76
>Z92829-9|CAB07349.1| 360|Caenorhabditis elegans Hypothetical
protein F10A3.13 protein.
Length = 360
Score = 26.2 bits (55), Expect = 7.8
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = -3
Query: 272 FSLFKRVLEKVAVLLLHVHRNGVEVFELDRLVR-FGVFVFNLMMVSRFTNQRLVVVFRFD 96
F F ++ + LL +H ++ +VR F +F+F++ + LV+VF F
Sbjct: 94 FLSFSDAFYRMIITLLAIHF----LYRYLSVVRPFNMFIFSMKFAPLWI---LVLVFNFS 146
Query: 95 LGSFIMYYSRKSSHCGNE 42
+ +F YY S +E
Sbjct: 147 MWTFCFYYLNGPSEMKDE 164
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -3
Query: 359 LGTGPPLEDKSTAVLVFSLRVNQLEVLL*FSLFKRVLEKVAVLLLHVHRNGVEV 198
L T P S+ VLV ++ Q + L R K++ L LH H + +E+
Sbjct: 1497 LSTVPTCASSSSNVLVPNVNFLQKDETLKCDQCDRTFRKISDLTLHQHTHNIEM 1550
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -3
Query: 359 LGTGPPLEDKSTAVLVFSLRVNQLEVLL*FSLFKRVLEKVAVLLLHVHRNGVEV 198
L T P S+ VLV ++ Q + L R K++ L LH H + +E+
Sbjct: 1565 LSTVPTCASSSSNVLVPNVNFLQKDETLKCDQCDRTFRKISDLTLHQHTHNIEM 1618
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -3
Query: 359 LGTGPPLEDKSTAVLVFSLRVNQLEVLL*FSLFKRVLEKVAVLLLHVHRNGVEV 198
L T P S+ VLV ++ Q + L R K++ L LH H + +E+
Sbjct: 1565 LSTVPTCASSSSNVLVPNVNFLQKDETLKCDQCDRTFRKISDLTLHQHTHNIEM 1618
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -3
Query: 359 LGTGPPLEDKSTAVLVFSLRVNQLEVLL*FSLFKRVLEKVAVLLLHVHRNGVEV 198
L T P S+ VLV ++ Q + L R K++ L LH H + +E+
Sbjct: 1565 LSTVPTCASSSSNVLVPNVNFLQKDETLKCDQCDRTFRKISDLTLHQHTHNIEM 1618
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -3
Query: 359 LGTGPPLEDKSTAVLVFSLRVNQLEVLL*FSLFKRVLEKVAVLLLHVHRNGVEV 198
L T P S+ VLV ++ Q + L R K++ L LH H + +E+
Sbjct: 1565 LSTVPTCASSSSNVLVPNVNFLQKDETLKCDQCDRTFRKISDLTLHQHTHNIEM 1618
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical protein
T05A10.1i protein.
Length = 1927
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -3
Query: 359 LGTGPPLEDKSTAVLVFSLRVNQLEVLL*FSLFKRVLEKVAVLLLHVHRNGVEV 198
L T P S+ VLV ++ Q + L R K++ L LH H + +E+
Sbjct: 1565 LSTVPTCASSSSNVLVPNVNFLQKDETLKCDQCDRTFRKISDLTLHQHTHNIEM 1618
>Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical protein
T05A10.1c protein.
Length = 1692
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -3
Query: 359 LGTGPPLEDKSTAVLVFSLRVNQLEVLL*FSLFKRVLEKVAVLLLHVHRNGVEV 198
L T P S+ VLV ++ Q + L R K++ L LH H + +E+
Sbjct: 1123 LSTVPTCASSSSNVLVPNVNFLQKDETLKCDQCDRTFRKISDLTLHQHTHNIEM 1176
>Z68108-6|CAF31486.1| 537|Caenorhabditis elegans Hypothetical
protein T05A10.1h protein.
Length = 537
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -3
Query: 359 LGTGPPLEDKSTAVLVFSLRVNQLEVLL*FSLFKRVLEKVAVLLLHVHRNGVEV 198
L T P S+ VLV ++ Q + L R K++ L LH H + +E+
Sbjct: 213 LSTVPTCASSSSNVLVPNVNFLQKDETLKCDQCDRTFRKISDLTLHQHTHNIEM 266
>U97194-4|AAP13781.1| 521|Caenorhabditis elegans Cyclin e protein
1, isoform b protein.
Length = 521
Score = 26.2 bits (55), Expect = 7.8
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = +3
Query: 177 HQSIKFEHFHPVPVYVKKEHSHLLKHPLEKGKSE--QNLKL--IHPE 305
H+SIK + H + VYVK+ P+ K + E Q+LK +HP+
Sbjct: 476 HESIKSDDSHNIQVYVKRSS----MEPIVKSERERIQHLKARRLHPQ 518
>U97194-3|AAK68235.1| 524|Caenorhabditis elegans Cyclin e protein
1, isoform a protein.
Length = 524
Score = 26.2 bits (55), Expect = 7.8
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = +3
Query: 177 HQSIKFEHFHPVPVYVKKEHSHLLKHPLEKGKSE--QNLKL--IHPE 305
H+SIK + H + VYVK+ P+ K + E Q+LK +HP+
Sbjct: 479 HESIKSDDSHNIQVYVKRSS----MEPIVKSERERIQHLKARRLHPQ 521
>U50309-1|AAG24137.1| 335|Caenorhabditis elegans Seven tm receptor
protein 129 protein.
Length = 335
Score = 26.2 bits (55), Expect = 7.8
Identities = 11/42 (26%), Positives = 26/42 (61%)
Frame = -3
Query: 272 FSLFKRVLEKVAVLLLHVHRNGVEVFELDRLVRFGVFVFNLM 147
+++ +E + + +LH+H++GV +F LD +++F + M
Sbjct: 50 YAIIYAFIEILTMPVLHIHKSGV-LFYLDGVLKFQTTIGGFM 90
>AY390551-1|AAQ94963.1| 926|Caenorhabditis elegans SMA-9 class IIc
protein.
Length = 926
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -3
Query: 359 LGTGPPLEDKSTAVLVFSLRVNQLEVLL*FSLFKRVLEKVAVLLLHVHRNGVEV 198
L T P S+ VLV ++ Q + L R K++ L LH H + +E+
Sbjct: 564 LSTVPTCASSSSNVLVPNVNFLQKDETLKCDQCDRTFRKISDLTLHQHTHNIEM 617
>AY390550-1|AAQ94962.1| 537|Caenorhabditis elegans SMA-9 class IIb
protein.
Length = 537
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -3
Query: 359 LGTGPPLEDKSTAVLVFSLRVNQLEVLL*FSLFKRVLEKVAVLLLHVHRNGVEV 198
L T P S+ VLV ++ Q + L R K++ L LH H + +E+
Sbjct: 213 LSTVPTCASSSSNVLVPNVNFLQKDETLKCDQCDRTFRKISDLTLHQHTHNIEM 266
>AY390549-1|AAQ94961.1| 411|Caenorhabditis elegans SMA-9 class IIb
protein.
Length = 411
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -3
Query: 359 LGTGPPLEDKSTAVLVFSLRVNQLEVLL*FSLFKRVLEKVAVLLLHVHRNGVEV 198
L T P S+ VLV ++ Q + L R K++ L LH H + +E+
Sbjct: 87 LSTVPTCASSSSNVLVPNVNFLQKDETLKCDQCDRTFRKISDLTLHQHTHNIEM 140
>AY390548-1|AAQ94960.1| 352|Caenorhabditis elegans SMA-9 class IIb
protein.
Length = 352
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -3
Query: 359 LGTGPPLEDKSTAVLVFSLRVNQLEVLL*FSLFKRVLEKVAVLLLHVHRNGVEV 198
L T P S+ VLV ++ Q + L R K++ L LH H + +E+
Sbjct: 28 LSTVPTCASSSSNVLVPNVNFLQKDETLKCDQCDRTFRKISDLTLHQHTHNIEM 81
>AY390547-1|AAQ94959.1| 337|Caenorhabditis elegans SMA-9 class IIb
protein.
Length = 337
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -3
Query: 359 LGTGPPLEDKSTAVLVFSLRVNQLEVLL*FSLFKRVLEKVAVLLLHVHRNGVEV 198
L T P S+ VLV ++ Q + L R K++ L LH H + +E+
Sbjct: 13 LSTVPTCASSSSNVLVPNVNFLQKDETLKCDQCDRTFRKISDLTLHQHTHNIEM 66
>AY390545-1|AAQ94957.1| 792|Caenorhabditis elegans SMA-9 class IIb
protein.
Length = 792
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -3
Query: 359 LGTGPPLEDKSTAVLVFSLRVNQLEVLL*FSLFKRVLEKVAVLLLHVHRNGVEV 198
L T P S+ VLV ++ Q + L R K++ L LH H + +E+
Sbjct: 468 LSTVPTCASSSSNVLVPNVNFLQKDETLKCDQCDRTFRKISDLTLHQHTHNIEM 521
>AY390542-1|AAQ94954.1| 468|Caenorhabditis elegans SMA-9 class IIa
protein.
Length = 468
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -3
Query: 359 LGTGPPLEDKSTAVLVFSLRVNQLEVLL*FSLFKRVLEKVAVLLLHVHRNGVEV 198
L T P S+ VLV ++ Q + L R K++ L LH H + +E+
Sbjct: 145 LSTVPTCASSSSNVLVPNVNFLQKDETLKCDQCDRTFRKISDLTLHQHTHNIEM 198
>AY390538-1|AAQ94950.1| 591|Caenorhabditis elegans SMA-9 class Ia
protein.
Length = 591
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -3
Query: 359 LGTGPPLEDKSTAVLVFSLRVNQLEVLL*FSLFKRVLEKVAVLLLHVHRNGVEV 198
L T P S+ VLV ++ Q + L R K++ L LH H + +E+
Sbjct: 22 LSTVPTCASSSSNVLVPNVNFLQKDETLKCDQCDRTFRKISDLTLHQHTHNIEM 75
>AF520616-1|AAM78547.1| 524|Caenorhabditis elegans cyclin E
protein.
Length = 524
Score = 26.2 bits (55), Expect = 7.8
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = +3
Query: 177 HQSIKFEHFHPVPVYVKKEHSHLLKHPLEKGKSE--QNLKL--IHPE 305
H+SIK + H + VYVK+ P+ K + E Q+LK +HP+
Sbjct: 479 HESIKSDDSHNIQVYVKRSS----MEPIVKSERERIQHLKARRLHPQ 521
>AF058331-1|AAC63505.1| 524|Caenorhabditis elegans cyclin E
protein.
Length = 524
Score = 26.2 bits (55), Expect = 7.8
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = +3
Query: 177 HQSIKFEHFHPVPVYVKKEHSHLLKHPLEKGKSE--QNLKL--IHPE 305
H+SIK + H + VYVK+ P+ K + E Q+LK +HP+
Sbjct: 479 HESIKSDDSHNIQVYVKRSS----MEPIVKSERERIQHLKARRLHPQ 521
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,294,463
Number of Sequences: 27780
Number of extensions: 197551
Number of successful extensions: 708
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -