Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS330B09f
         (521 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyce...    27   1.3  
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho...    27   1.7  
SPAC3H8.06 |aur1||inositol phosphorylceramide synthase |Schizosa...    25   6.8  
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c...    25   9.0  

>SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 2310

 Score = 27.5 bits (58), Expect = 1.3
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +1

Query: 331 VNWSRDKFVKNLCYRYQI-TDINVRFLLYTYIYLIDIHNLGKDIYIYHTNIFPWRDSNPR 507
           +NW R   V+N+C++ Q  +   +  +        DI++LG   Y+  T  +PW   + R
Sbjct: 182 LNWKRLYQVQNICHKLQFFSPEQIGNVGRPLDSRSDIYSLGILFYVILTKQYPWGGQSMR 241


>SPBC3E7.01 |fab1|ste12,
           SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
           Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1932

 Score = 27.1 bits (57), Expect = 1.7
 Identities = 21/55 (38%), Positives = 24/55 (43%)
 Frame = -2

Query: 511 GVAGSNPAKGRYLYDKYKCLFQGYGCLLNICMCIIKILHLYPLSGTCNTSSLRTY 347
           GV   +  K   LYD  +C      C  +I   I K L L P  GTC    LRTY
Sbjct: 627 GVIAFHGLKESVLYDIARC------CRADIISSIDK-LSLCPRLGTCGRFQLRTY 674


>SPAC3H8.06 |aur1||inositol phosphorylceramide synthase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 422

 Score = 25.0 bits (52), Expect = 6.8
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -2

Query: 520 LHKGVAGSNPAKGRYLYDKYKCLFQGYGCLLNICMCIIKILHLY 389
           LH G A        +++ +Y+  F GY  +L +C C + + H Y
Sbjct: 254 LHAGWAMLEALFLSHVFPRYRFCFYGY--VLWLCWCTMYLTHHY 295


>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 871

 Score = 24.6 bits (51), Expect = 9.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 456 HLYLSYKYLPLAGFEPATPL 515
           HLY  YK+LPL    P + +
Sbjct: 670 HLYFKYKFLPLMDAVPISAI 689


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,964,340
Number of Sequences: 5004
Number of extensions: 36306
Number of successful extensions: 78
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 77
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)