Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS330B08f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78018-3|CAB01444.1| 820|Caenorhabditis elegans Hypothetical pr... 61 4e-10
AF003134-6|AAB54146.3| 827|Caenorhabditis elegans Hypothetical ... 52 2e-07
U55363-8|AAA97966.1| 829|Caenorhabditis elegans Germinal center... 38 0.003
Z36752-7|CAA85329.1| 468|Caenorhabditis elegans Hypothetical pr... 36 0.013
AC025716-18|AAT81178.1| 998|Caenorhabditis elegans Hypothetical... 35 0.031
Z74029-5|CAA98433.2| 520|Caenorhabditis elegans Hypothetical pr... 35 0.041
Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical pr... 35 0.041
DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated... 35 0.041
Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical pr... 34 0.071
DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated... 34 0.071
AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical... 34 0.071
AL032639-11|CAA21637.2| 426|Caenorhabditis elegans Hypothetical... 34 0.071
Z68115-7|CAA92169.2| 302|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z50873-4|CAA90762.2| 302|Caenorhabditis elegans Hypothetical pr... 31 0.50
DQ645955-1|ABG36763.1| 302|Caenorhabditis elegans molting prote... 31 0.50
AM085500-1|CAJ30198.1| 947|Caenorhabditis elegans autophagy pro... 29 1.5
AF101315-4|AAO25988.1| 719|Caenorhabditis elegans Hypothetical ... 29 1.5
AF101315-3|AAC69227.1| 880|Caenorhabditis elegans Hypothetical ... 29 1.5
Z30423-3|CAA83005.2| 456|Caenorhabditis elegans Hypothetical pr... 27 6.2
U97013-4|AAB52339.1| 968|Caenorhabditis elegans Alanyl trna syn... 27 8.1
>Z78018-3|CAB01444.1| 820|Caenorhabditis elegans Hypothetical
protein W07G4.3 protein.
Length = 820
Score = 61.3 bits (142), Expect = 4e-10
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Frame = +3
Query: 156 STPLEKFCNNLLKYRHPCIVRYISAWQQRSTLHLATEYVLPLSHVLK----TLSPLQICI 323
S+ L++ L RHP I+ Y+ + + T +L TE PL LK T S + +
Sbjct: 55 SSTLKQQAQKLKTMRHPNIITYLDSIELEGTFYLVTEKCKPLELYLKEAGLTESQKEFVV 114
Query: 324 --GLNNILRALVFLHDQASMSHNNVSTSAVYVTGDGQWKLGGLQYLCPFS 467
G+ +L AL F+H+ A +SH N+ V+VT G WK+GGL + F+
Sbjct: 115 SWGMFQLLNALKFMHE-AKLSHENLR-KGVFVTAGGDWKIGGLHLVTGFT 162
>AF003134-6|AAB54146.3| 827|Caenorhabditis elegans Hypothetical
protein ZC581.9 protein.
Length = 827
Score = 52.0 bits (119), Expect = 2e-07
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 14/132 (10%)
Frame = +3
Query: 99 DGSVSVF--KGEAAAGPLWAVSTPLEKFCNNLLKYR--------HPCIVRYISAWQQ-RS 245
D SV VF K A P S F +L+KY HP I+ + ++ +
Sbjct: 91 DASVLVFDKKSNVKAPPKLGKSKTYSMF--DLIKYETQQLMGLIHPRILHMEHSLEETKD 148
Query: 246 TLHLATEYVLP-LSHVL--KTLSPLQICIGLNNILRALVFLHDQASMSHNNVSTSAVYVT 416
+ ATE + L +V+ ++L L+I +G+ I+ + +LH+ A M H N++ A+YVT
Sbjct: 149 YISFATEQIFGNLENVVTDESLDRLEIKLGVLQIIDGMSYLHNSAKMLHGNLTPDAIYVT 208
Query: 417 GDGQWKLGGLQY 452
WK+GG +
Sbjct: 209 ATKTWKIGGFSF 220
>U55363-8|AAA97966.1| 829|Caenorhabditis elegans Germinal center
kinase family protein2 protein.
Length = 829
Score = 38.3 bits (85), Expect = 0.003
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +3
Query: 201 HPCIVRYISAWQQRSTLHLATEY-----VLPLSHVLKTLSPLQICIGLNNILRALVFLHD 365
HP I+ Y ++ +R L + EY + + H+ LS LQI LR L +LH+
Sbjct: 69 HPNIIAYFGSYIRRDRLWIVMEYCGGGSLQDIYHLTGPLSELQIAFVCRETLRGLNYLHN 128
Query: 366 QASMSHNNVSTSAVYVTGDGQWKL 437
+ H ++ + + ++ G KL
Sbjct: 129 MGKI-HRDIKGANILLSSSGDVKL 151
>Z36752-7|CAA85329.1| 468|Caenorhabditis elegans Hypothetical
protein F35H8.7 protein.
Length = 468
Score = 36.3 bits (80), Expect = 0.013
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +3
Query: 201 HPCIVRYISAWQQRSTLHLATEY----VLPLSHVLKTLSPLQICIGLNNILRALVFLHDQ 368
HP IVR+ AW + LH+ E + H + L ++ +IL+ L LH+
Sbjct: 159 HPNIVRFHQAWIDKQILHIQLEMCDKSLAAYCHGIDWLEDKELWNVFLDILQGLGHLHNN 218
Query: 369 ASMSHNNVSTSAVYVTGDGQWKLG 440
M HN++ +++T + KLG
Sbjct: 219 -FMLHNDIKPDNIFMTKNKVCKLG 241
>AC025716-18|AAT81178.1| 998|Caenorhabditis elegans Hypothetical
protein Y39G10AR.3 protein.
Length = 998
Score = 35.1 bits (77), Expect = 0.031
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Frame = +3
Query: 186 LLKYRHPCIVRYISAWQQRSTLHLATEY------VLPLSHVLKTLSPLQICIGLNNILRA 347
L + HP I+ Y ++++ L + EY LS L QI + + A
Sbjct: 222 LSRIEHPNIIAYYDSFEEEGVLMIEMEYADGGTLAQMLSRTQNLLDEEQIGDMMIQMCSA 281
Query: 348 LVFLHDQASMSHNNVSTSAVYVTGDGQWKLG 440
+ +LH+ S+ H ++ T+ V++T D K+G
Sbjct: 282 VAYLHEN-SVLHRDLKTANVFLTRDSFVKIG 311
>Z74029-5|CAA98433.2| 520|Caenorhabditis elegans Hypothetical
protein C45B11.1b protein.
Length = 520
Score = 34.7 bits (76), Expect = 0.041
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Frame = +3
Query: 186 LLKYRHPCIVRYISAWQQRSTLHLATEYVL--PLSHVLKT--LSPLQICIGLNNILRALV 353
L +Y+HP IVR+ S+ L + E++ L+ ++ ++ QI +L AL
Sbjct: 278 LRQYQHPNIVRFFSSHLVDDELWVVMEFMEGGSLTDIVTATRMTEPQIATISRQVLGALD 337
Query: 354 FLHDQASMSHNNVSTSAVYVTGDGQWKLGGLQYLCPFSELTP 479
FLH + + H ++ + ++ + DG KL + SE P
Sbjct: 338 FLHAR-KVIHRDIKSDSILLKRDGTVKLTDFGFCGQLSEEVP 378
>Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical
protein C45B11.1a protein.
Length = 522
Score = 34.7 bits (76), Expect = 0.041
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Frame = +3
Query: 186 LLKYRHPCIVRYISAWQQRSTLHLATEYVL--PLSHVLKT--LSPLQICIGLNNILRALV 353
L +Y+HP IVR+ S+ L + E++ L+ ++ ++ QI +L AL
Sbjct: 280 LRQYQHPNIVRFFSSHLVDDELWVVMEFMEGGSLTDIVTATRMTEPQIATISRQVLGALD 339
Query: 354 FLHDQASMSHNNVSTSAVYVTGDGQWKLGGLQYLCPFSELTP 479
FLH + + H ++ + ++ + DG KL + SE P
Sbjct: 340 FLHAR-KVIHRDIKSDSILLKRDGTVKLTDFGFCGQLSEEVP 380
>DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated
kinase PAK-2 protein.
Length = 522
Score = 34.7 bits (76), Expect = 0.041
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Frame = +3
Query: 186 LLKYRHPCIVRYISAWQQRSTLHLATEYVL--PLSHVLKT--LSPLQICIGLNNILRALV 353
L +Y+HP IVR+ S+ L + E++ L+ ++ ++ QI +L AL
Sbjct: 280 LRQYQHPNIVRFFSSHLVDDELWVVMEFMEGGSLTDIVTATRMTEPQIATISRQVLGALD 339
Query: 354 FLHDQASMSHNNVSTSAVYVTGDGQWKLGGLQYLCPFSELTP 479
FLH + + H ++ + ++ + DG KL + SE P
Sbjct: 340 FLHAR-KVIHRDIKSDSILLKRDGTVKLTDFGFCGQLSEEVP 380
>Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 33.9 bits (74), Expect = 0.071
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Frame = +3
Query: 192 KYRHPCIVRYISAW-QQRSTLHLATEYVLP---LSHVLKT-LSPLQICIGLNNILRALVF 356
+YRHP +V YI ++ L + +Y+ V+KT L QI L L+AL F
Sbjct: 379 QYRHPNLVNYIESYLVDADDLWVVMDYLEGGNLTDVVVKTELDEGQIAAVLQECLKALHF 438
Query: 357 LHDQASMSHNNVSTSAVYVTGDGQWKL 437
LH + S+ H ++ + V + +G+ KL
Sbjct: 439 LH-RHSIVHRDIKSDNVLLGMNGEVKL 464
>DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated
kinase MAX-2 protein.
Length = 598
Score = 33.9 bits (74), Expect = 0.071
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Frame = +3
Query: 192 KYRHPCIVRYISAW-QQRSTLHLATEYVLP---LSHVLKT-LSPLQICIGLNNILRALVF 356
+YRHP +V YI ++ L + +Y+ V+KT L QI L L+AL F
Sbjct: 379 QYRHPNLVNYIESYLVDADDLWVVMDYLEGGNLTDVVVKTELDEGQIAAVLQECLKALHF 438
Query: 357 LHDQASMSHNNVSTSAVYVTGDGQWKL 437
LH + S+ H ++ + V + +G+ KL
Sbjct: 439 LH-RHSIVHRDIKSDNVLLGMNGEVKL 464
>AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 33.9 bits (74), Expect = 0.071
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Frame = +3
Query: 192 KYRHPCIVRYISAW-QQRSTLHLATEYVLP---LSHVLKT-LSPLQICIGLNNILRALVF 356
+YRHP +V YI ++ L + +Y+ V+KT L QI L L+AL F
Sbjct: 379 QYRHPNLVNYIESYLVDADDLWVVMDYLEGGNLTDVVVKTELDEGQIAAVLQECLKALHF 438
Query: 357 LHDQASMSHNNVSTSAVYVTGDGQWKL 437
LH + S+ H ++ + V + +G+ KL
Sbjct: 439 LH-RHSIVHRDIKSDNVLLGMNGEVKL 464
>AL032639-11|CAA21637.2| 426|Caenorhabditis elegans Hypothetical
protein Y38F1A.10b protein.
Length = 426
Score = 33.9 bits (74), Expect = 0.071
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Frame = +3
Query: 192 KYRHPCIVRYISAW-QQRSTLHLATEYVLP---LSHVLKT-LSPLQICIGLNNILRALVF 356
+YRHP +V YI ++ L + +Y+ V+KT L QI L L+AL F
Sbjct: 207 QYRHPNLVNYIESYLVDADDLWVVMDYLEGGNLTDVVVKTELDEGQIAAVLQECLKALHF 266
Query: 357 LHDQASMSHNNVSTSAVYVTGDGQWKL 437
LH + S+ H ++ + V + +G+ KL
Sbjct: 267 LH-RHSIVHRDIKSDNVLLGMNGEVKL 292
>Z68115-7|CAA92169.2| 302|Caenorhabditis elegans Hypothetical
protein F19H6.1 protein.
Length = 302
Score = 31.1 bits (67), Expect = 0.50
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +3
Query: 336 ILRALVFLHDQASMSHNNVSTSAVYVTGDGQWKLGGLQYLCPFSELTPA 482
+ RAL +H + M H ++ + V++TG+G KLG L FS T A
Sbjct: 134 LARALAHMHSKRIM-HRDIKPANVFITGNGIVKLGDLGLGRFFSSKTTA 181
>Z50873-4|CAA90762.2| 302|Caenorhabditis elegans Hypothetical
protein F19H6.1 protein.
Length = 302
Score = 31.1 bits (67), Expect = 0.50
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +3
Query: 336 ILRALVFLHDQASMSHNNVSTSAVYVTGDGQWKLGGLQYLCPFSELTPA 482
+ RAL +H + M H ++ + V++TG+G KLG L FS T A
Sbjct: 134 LARALAHMHSKRIM-HRDIKPANVFITGNGIVKLGDLGLGRFFSSKTTA 181
>DQ645955-1|ABG36763.1| 302|Caenorhabditis elegans molting protein
MLT-1 protein.
Length = 302
Score = 31.1 bits (67), Expect = 0.50
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +3
Query: 336 ILRALVFLHDQASMSHNNVSTSAVYVTGDGQWKLGGLQYLCPFSELTPA 482
+ RAL +H + M H ++ + V++TG+G KLG L FS T A
Sbjct: 134 LARALAHMHSKRIM-HRDIKPANVFITGNGIVKLGDLGLGRFFSSKTTA 181
>AM085500-1|CAJ30198.1| 947|Caenorhabditis elegans autophagy
protein 9 protein.
Length = 947
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -3
Query: 318 KFVKVKEFSEHDLEVAHILLPNAVSNAVAMLICISQ 211
K ++++F H+L++A LPN +A+ IC +Q
Sbjct: 244 KMSEIQQFYAHELKIADDQLPNLTWHAIVKRICEAQ 279
>AF101315-4|AAO25988.1| 719|Caenorhabditis elegans Hypothetical
protein T22H9.2b protein.
Length = 719
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -3
Query: 318 KFVKVKEFSEHDLEVAHILLPNAVSNAVAMLICISQ 211
K ++++F H+L++A LPN +A+ IC +Q
Sbjct: 244 KMSEIQQFYAHELKIADDQLPNLTWHAIVKRICEAQ 279
>AF101315-3|AAC69227.1| 880|Caenorhabditis elegans Hypothetical
protein T22H9.2a protein.
Length = 880
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -3
Query: 318 KFVKVKEFSEHDLEVAHILLPNAVSNAVAMLICISQ 211
K ++++F H+L++A LPN +A+ IC +Q
Sbjct: 244 KMSEIQQFYAHELKIADDQLPNLTWHAIVKRICEAQ 279
>Z30423-3|CAA83005.2| 456|Caenorhabditis elegans Hypothetical
protein T20G5.4 protein.
Length = 456
Score = 27.5 bits (58), Expect = 6.2
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +3
Query: 210 IVRYI-SAWQQRSTLHLATEYVLPLSHVLKTLSPLQICIG--LNNILRALVFLHDQASMS 380
I R+I SA+QQ+ + L +S+V PL +G + +LR +L+D
Sbjct: 49 IYRFILSAYQQQIFVRLVDYVNSRMSYV-----PLDWMLGFFIAGVLRRFWYLYDIIGFI 103
Query: 381 HNNVSTSAVYVTGDGQWKLGGLQYLCPFSELT 476
N ++A Y+ GD + + + + ELT
Sbjct: 104 DNIACSTATYIRGDSERAKQYRRNIIRYCELT 135
>U97013-4|AAB52339.1| 968|Caenorhabditis elegans Alanyl trna
synthetase protein 2 protein.
Length = 968
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 30 ITEFWQQYQATIKDSCRY-FSLKGDGSVSVFKGEAAAGPLWAV 155
+ E Q+ T DS +Y ++ G+GS +V+K E G + A+
Sbjct: 471 LAELQQKGVPTTDDSPKYAYTFTGEGSDAVYKFEPCVGKILAI 513
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,415,865
Number of Sequences: 27780
Number of extensions: 263098
Number of successful extensions: 766
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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