Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS330B08f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   1.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   1.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.5  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    23   2.5  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    22   3.3  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   3.3  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    22   3.3  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -3

Query: 453 SIASHLVSTGHHLSHIQLKY*HYYVTC*PDHARILKL 343
           +I S + S   H + + +++  YY    PDH RI+KL
Sbjct: 622 AIKSVVPSDESHWNDLAMEF--YYNRSIPDHKRIVKL 656


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -3

Query: 453 SIASHLVSTGHHLSHIQLKY*HYYVTC*PDHARILKL 343
           +I S + S   H + + +++  YY    PDH RI+KL
Sbjct: 660 AIKSVVPSDESHWNDLAMEF--YYNRSIPDHKRIVKL 694


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 402 AVYVTGDGQWKLGGLQYLCPF 464
           AVYV  +G W L G  ++C F
Sbjct: 243 AVYVLVNGSWSLPG--FVCDF 261


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 7/21 (33%), Positives = 16/21 (76%)
 Frame = +3

Query: 210 IVRYISAWQQRSTLHLATEYV 272
           +VRY+S W++   L++A+ ++
Sbjct: 225 LVRYVSQWEEVYFLNMASVFM 245


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 187 Y*NIDIHVL*DTYQHGNSVRHCIWQQNMC 273
           Y N+DI V+ +T +  N+  +C+  Q  C
Sbjct: 28  YDNVDIDVVLNTERLLNAYVNCLLDQGPC 56


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 435 LGGLQYLCPFSELTPAYLKHARIH 506
           L GL  +  +  +TP   KH +IH
Sbjct: 303 LAGLLSVLGYKYITPLIQKHLKIH 326


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 187 Y*NIDIHVL*DTYQHGNSVRHCIWQQNMC 273
           Y N+DI V+ +T +  N+  +C+  Q  C
Sbjct: 28  YDNVDIDVVLNTERLLNAYVNCLLDQGPC 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,194
Number of Sequences: 438
Number of extensions: 2862
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)