Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS330B07f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81531-10|CAE17807.1|  367|Caenorhabditis elegans Hypothetical p...    29   2.7  
U29097-8|AAA68415.1|  341|Caenorhabditis elegans Serpentine rece...    27   6.2  
AF025469-1|AAG00030.3|  578|Caenorhabditis elegans Hypothetical ...    27   6.2  
AC025726-25|AAK73927.2|  409|Caenorhabditis elegans Hypothetical...    27   8.1  

>Z81531-10|CAE17807.1|  367|Caenorhabditis elegans Hypothetical
           protein F36D3.13 protein.
          Length = 367

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 102 CVVCYLLVPH*REVLHSKLNKTITLFLKDS 13
           CV+CYL+    RE + S  NKT T+ ++ S
Sbjct: 319 CVLCYLMSTKYREAVKSMFNKTNTVDIQMS 348


>U29097-8|AAA68415.1|  341|Caenorhabditis elegans Serpentine
           receptor, class a (alpha)protein 28 protein.
          Length = 341

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -3

Query: 282 VHNKLSLKLLCHYYYKVSLRWKILERNYL 196
           +HNK+  K + H  Y ++ R+K  E NYL
Sbjct: 208 IHNKIREKRMVHNVYNINSRYKSYE-NYL 235


>AF025469-1|AAG00030.3|  578|Caenorhabditis elegans Hypothetical
           protein W09B6.3 protein.
          Length = 578

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 148 TPALVNYFPRNPTSNRQIV 204
           TP +V YFP+NP    +IV
Sbjct: 448 TPKIVEYFPKNPKKRVEIV 466


>AC025726-25|AAK73927.2|  409|Caenorhabditis elegans Hypothetical
           protein Y71G12B.26 protein.
          Length = 409

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 151 PALVNYFPRNPTSNRQIV 204
           P + NYFP NP SN  +V
Sbjct: 184 PVIWNYFPDNPNSNLSLV 201


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,013,179
Number of Sequences: 27780
Number of extensions: 210286
Number of successful extensions: 366
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 366
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)