Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS330A10f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81537-2|CAB04373.1|  682|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AF101305-6|AAF98598.1|  506|Caenorhabditis elegans Udp-glucurono...    28   4.7  
AF016657-1|AAB93653.1|  361|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z81537-2|CAB04373.1|  682|Caenorhabditis elegans Hypothetical
           protein F41D3.2 protein.
          Length = 682

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +3

Query: 324 TTLLHVRILRIAIAFNVVSFKVWQSII 404
           T+LLH       IAFN V  +VWQ II
Sbjct: 182 TSLLHFNFSPAPIAFNSVFARVWQFII 208


>AF101305-6|AAF98598.1|  506|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein63 protein.
          Length = 506

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 422 NTPYSLLRN*YVSYYHRLWSKF 487
           N P+S+L     +YYHR+W+ +
Sbjct: 187 NLPFSMLNYTVSNYYHRVWAAY 208


>AF016657-1|AAB93653.1|  361|Caenorhabditis elegans Hypothetical
           protein C16C4.7 protein.
          Length = 361

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/44 (25%), Positives = 27/44 (61%)
 Frame = -2

Query: 427 RIFFSYAQIILCQTLNETTLNAIAILKIRTCNNVVESGVFLYYI 296
           RI FSY++I L  ++ ++ +  +A+ +  TC  +V + + + ++
Sbjct: 179 RIRFSYSRIWLHISIFDSNIPFMAVFQHSTCQAIVSNSLIIVFL 222


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,249,628
Number of Sequences: 27780
Number of extensions: 193202
Number of successful extensions: 397
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 397
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)