Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS330A08f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98886-1|CAI22750.1|  411|Homo sapiens adherens junction associa...    32   1.4  
AY282806-1|AAP35025.1|  411|Homo sapiens transmembrane protein S...    32   1.4  
AL391808-1|CAH72438.1|  411|Homo sapiens adherens junction assoc...    32   1.4  
AL023586-1|CAI20566.1|  411|Homo sapiens adherens junction assoc...    32   1.4  
AF175409-1|AAD53278.1|  411|Homo sapiens unknown protein.              32   1.4  
AK127571-1|BAC87040.1|  753|Homo sapiens protein ( Homo sapiens ...    29   7.5  

>Z98886-1|CAI22750.1|  411|Homo sapiens adherens junction associated
           protein 1 protein.
          Length = 411

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
 Frame = +2

Query: 275 GDPLRND-PTYDYEPPILERVHYWADDTRVERDHYPERKSEILMLGVSSRKPSIAATHPP 451
           G P R   P +   PP +ER+H      R  R H P  ++  L+      KP  AA   P
Sbjct: 69  GQPARVPAPVWSPRPPRVERIHGQMQMPRARRAHRPRDQAAALVPKAGLAKPPAAAKSSP 128


>AY282806-1|AAP35025.1|  411|Homo sapiens transmembrane protein
           SHREW1 protein.
          Length = 411

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
 Frame = +2

Query: 275 GDPLRND-PTYDYEPPILERVHYWADDTRVERDHYPERKSEILMLGVSSRKPSIAATHPP 451
           G P R   P +   PP +ER+H      R  R H P  ++  L+      KP  AA   P
Sbjct: 69  GQPARVPAPVWSPRPPRVERIHGQMQMPRARRAHRPRDQAAALVPKAGLAKPPAAAKSSP 128


>AL391808-1|CAH72438.1|  411|Homo sapiens adherens junction
           associated protein 1 protein.
          Length = 411

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
 Frame = +2

Query: 275 GDPLRND-PTYDYEPPILERVHYWADDTRVERDHYPERKSEILMLGVSSRKPSIAATHPP 451
           G P R   P +   PP +ER+H      R  R H P  ++  L+      KP  AA   P
Sbjct: 69  GQPARVPAPVWSPRPPRVERIHGQMQMPRARRAHRPRDQAAALVPKAGLAKPPAAAKSSP 128


>AL023586-1|CAI20566.1|  411|Homo sapiens adherens junction
           associated protein 1 protein.
          Length = 411

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
 Frame = +2

Query: 275 GDPLRND-PTYDYEPPILERVHYWADDTRVERDHYPERKSEILMLGVSSRKPSIAATHPP 451
           G P R   P +   PP +ER+H      R  R H P  ++  L+      KP  AA   P
Sbjct: 69  GQPARVPAPVWSPRPPRVERIHGQMQMPRARRAHRPRDQAAALVPKAGLAKPPAAAKSSP 128


>AF175409-1|AAD53278.1|  411|Homo sapiens unknown protein.
          Length = 411

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
 Frame = +2

Query: 275 GDPLRND-PTYDYEPPILERVHYWADDTRVERDHYPERKSEILMLGVSSRKPSIAATHPP 451
           G P R   P +   PP +ER+H      R  R H P  ++  L+      KP  AA   P
Sbjct: 69  GQPARVPAPVWSPRPPRVERIHGQMQMPRARRAHRPRDQAAALVPKAGLAKPPAAAKSSP 128


>AK127571-1|BAC87040.1|  753|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45664 fis, clone CTONG2027783. ).
          Length = 753

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = -3

Query: 231 EKFEIKLLL*ASAALVDPNATTDETMNNITQLSLFQFIFVLYHGA 97
           EKFE+ L +  +AAL  P+ TT    ++++ L   QF   +Y G+
Sbjct: 182 EKFELVLRMPMNAALGKPSKTTVSINDSVSDLPKMQFKERIYTGS 226


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,905,795
Number of Sequences: 237096
Number of extensions: 1381869
Number of successful extensions: 2567
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2565
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)