Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS330A08f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021271-1|AAX33419.1|  842|Drosophila melanogaster RE46655p pro...    66   3e-11
AE014134-2788|AAF53573.1|  842|Drosophila melanogaster CG13272-P...    66   3e-11
AF181642-1|AAD55428.1| 1073|Drosophila melanogaster BcDNA.GH1077...    29   3.8  
AE014296-765|AAF47839.2| 1073|Drosophila melanogaster CG14992-PA...    29   3.8  
AE014297-3749|AAF56430.2| 2695|Drosophila melanogaster CG11856-P...    29   5.1  
AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1 pr...    28   8.8  

>BT021271-1|AAX33419.1|  842|Drosophila melanogaster RE46655p
           protein.
          Length = 842

 Score = 66.1 bits (154), Expect = 3e-11
 Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 18/92 (19%)
 Frame = +2

Query: 230 SPRMD---FDQWKPLTGRGDPLRNDPTYDYEPPILERVHYWADDTRV--------ERDHY 376
           +PR+D    ++W+PL G GDPL+ DPTYDY PP L+RV YWA++           +++  
Sbjct: 67  APRLDPNNNNEWRPL-GHGDPLQKDPTYDYSPPALDRVRYWAENNSTGQSNPEARKKELP 125

Query: 377 PE-----RKSEILMLGVSSRKPSIAATH--PP 451
           PE      KSE+L+LGV+S +  +  +H  PP
Sbjct: 126 PEVLRNKTKSEVLLLGVASDRVRVPHSHSYPP 157


>AE014134-2788|AAF53573.1|  842|Drosophila melanogaster CG13272-PA
           protein.
          Length = 842

 Score = 66.1 bits (154), Expect = 3e-11
 Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 18/92 (19%)
 Frame = +2

Query: 230 SPRMD---FDQWKPLTGRGDPLRNDPTYDYEPPILERVHYWADDTRV--------ERDHY 376
           +PR+D    ++W+PL G GDPL+ DPTYDY PP L+RV YWA++           +++  
Sbjct: 67  APRLDPNNNNEWRPL-GHGDPLQKDPTYDYSPPALDRVRYWAENNSTGQSNPEARKKELP 125

Query: 377 PE-----RKSEILMLGVSSRKPSIAATH--PP 451
           PE      KSE+L+LGV+S +  +  +H  PP
Sbjct: 126 PEVLRNKTKSEVLLLGVASDRVRVPHSHSYPP 157


>AF181642-1|AAD55428.1| 1073|Drosophila melanogaster BcDNA.GH10777
           protein.
          Length = 1073

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 7/111 (6%)
 Frame = +2

Query: 140 CVMLFIVSSVVALGSTNAAEAHSSSLISNFSPRMDFDQWKPLTGRG----DPLRNDPTYD 307
           C++   +      GS+ + + + S    N  P+ DFD  K     G     P +  PTY 
Sbjct: 583 CILDAPIDVPTYAGSSGSGDLNVSPTYYNEQPQFDFDPAKMTASPGRLQPPPYQMPPTYS 642

Query: 308 YEPPILER--VHYWADDTRV-ERDHYPERKSEILMLGVSSRKPSIAATHPP 451
                +++  +H     T V ERD +     E  +   S+   S+ A  PP
Sbjct: 643 NTMEFVQKRDLHQQQLATPVRERDPFDTTNVETTVALYSNFNQSLEAASPP 693


>AE014296-765|AAF47839.2| 1073|Drosophila melanogaster CG14992-PA
           protein.
          Length = 1073

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 7/111 (6%)
 Frame = +2

Query: 140 CVMLFIVSSVVALGSTNAAEAHSSSLISNFSPRMDFDQWKPLTGRG----DPLRNDPTYD 307
           C++   +      GS+ + + + S    N  P+ DFD  K     G     P +  PTY 
Sbjct: 583 CILDAPIDVPTYAGSSGSGDLNVSPTYYNEQPQFDFDPAKMTASPGRLQPPPYQMPPTYS 642

Query: 308 YEPPILER--VHYWADDTRV-ERDHYPERKSEILMLGVSSRKPSIAATHPP 451
                +++  +H     T V ERD +     E  +   S+   S+ A  PP
Sbjct: 643 NTMEFVQKRDLHQQQLATPVRERDPFDTTNVETTVALYSNFNQSLEAASPP 693


>AE014297-3749|AAF56430.2| 2695|Drosophila melanogaster CG11856-PA
            protein.
          Length = 2695

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 28/120 (23%), Positives = 46/120 (38%), Gaps = 6/120 (5%)
 Frame = +2

Query: 122  NWNKESCVMLFIVSSVVALGSTNAAEAHSSSLISNFSPRM-DFDQWKPLTGRGDPLRNDP 298
            N   ES V +F   S  +  +    ++ +   ++ FS +M    Q++        L    
Sbjct: 680  NQQMESYVRVFKYGSAGSTAAWQDLQSLAEEAVTYFSEKMFRIGQYEQFLDEVRGLHLPM 739

Query: 299  TYDYEPPILERVHYWADDTRVERDHYPERKSEIL-----MLGVSSRKPSIAATHPPQQTR 463
             Y  +      +   +   R  RD Y ER+ E L     ++    + P IAA H  QQ R
Sbjct: 740  AYFLQSEACHHLEESSKLPRTSRDRYSERRRECLQKTQKLIKNDDKHPLIAAMHRHQQDR 799


>AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1
           protein.
          Length = 5327

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
 Frame = +2

Query: 161 SSVVALGSTNAAEAHSSSLISNFSPRMDFDQWKPLTG-RGDPLRNDPTYDYEPPILERVH 337
           ++  A  +   A A + S+ ++  P  + D     TG    P   +P  + EP   E  H
Sbjct: 513 AAAAAASAATIARAKADSMDTDAEPEHEADPEPADTGDEAAPTEQEPEAETEP---EPEH 569

Query: 338 YWADDTRVERDHYPERKSEILMLGVSSRKPSIAAT 442
               +   ++D   E+K E+L++      P++ AT
Sbjct: 570 --EPEAEQDKDVGEEKKVEVLIMKPQQATPAVIAT 602


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,640,229
Number of Sequences: 53049
Number of extensions: 423115
Number of successful extensions: 1148
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)