Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS330A08f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    22   3.3  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    22   3.3  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   5.8  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   7.7  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   7.7  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   7.7  

>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -1

Query: 305 HRSDRFLKGLHDQLKVSIDQNPFGEKNSRS 216
           +R DR  + LH++ +  +++    ++NSRS
Sbjct: 12  YRKDRRYEKLHNEKEKLLEERTNRKRNSRS 41


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -1

Query: 305 HRSDRFLKGLHDQLKVSIDQNPFGEKNSRS 216
           +R DR  + LH++ +  +++    ++NSRS
Sbjct: 12  YRKDRRYEKLHNEKEKLLEERTNRKRNSRS 41


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 412 FFTKTEHSSNTPATTNQETANK 477
           F+T T H ++ PA    +T +K
Sbjct: 31  FWTATSHEASAPAEGKFKTVSK 52


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 455 VVAGVLLLCSVFVKKPLTLKFQIFVL 378
           V+   L++ SVF  +PL +    F++
Sbjct: 51  VLGNALVILSVFTYRPLRIVQNFFIV 76


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 455 VVAGVLLLCSVFVKKPLTLKFQIFVL 378
           V+   L++ SVF  +PL +    F++
Sbjct: 51  VLGNALVILSVFTYRPLRIVQNFFIV 76


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 455 VVAGVLLLCSVFVKKPLTLKFQIFVL 378
           V+   L++ SVF  +PL +    F++
Sbjct: 51  VLGNALVILSVFTYRPLRIVQNFFIV 76


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,518
Number of Sequences: 438
Number of extensions: 2743
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)